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Entry version 113 (26 Feb. 2020)
Sequence version 1 (01 Mar. 2001)
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Protein

Magnesium-chelatase subunit ChlH, chloroplastic

Gene

CHLH

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Multifunctional protein involved in chlorophyll synthesis, plastid-to-nucleus retrograde signaling and abscisic acid (ABA) perception. In chlorophyll synthesis, catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. The reaction takes place in two steps, with an ATP-dependent activation followed by an ATP-dependent chelation step. In addition to its function in the Mg-chelatase enzyme, is required for the plastid-to-nucleus retrograde signaling. The plastid-to-nucleus signal plays an important role in the coordinated expression of both nuclear- and chloroplast-localized genes that encode photosynthesis-related proteins. Has a role in mediating ABA signaling in stomatal guard cells and during seed germination. Binds ABA and is a positive regulator of ABA signaling.7 Publications

Miscellaneous

Plants silencing CHLH show significant ABA-insensitive phenotypes in seed germination, post-germination growth arrest by ABA and ABA-induced promotion of stomatal closure and inhibition of stomatal opening. In contrast, plants over-expressing ABAR display ABA-hypersensitive phenotypes (PubMed:17051210).1 Publication

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section describes the metabolic pathway(s) associated with a protein.<p><a href='/help/pathway' target='_top'>More...</a></p>Pathwayi: chlorophyll biosynthesis

This protein is involved in the pathway chlorophyll biosynthesis, which is part of Porphyrin-containing compound metabolism.
View all proteins of this organism that are known to be involved in the pathway chlorophyll biosynthesis and in Porphyrin-containing compound metabolism.

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionLigase
Biological processChlorophyll biosynthesis, Photosynthesis
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
MetaCyc:AT5G13630-MONOMER

UniPathway: a resource for the exploration and annotation of metabolic pathways

More...
UniPathwayi
UPA00668

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Magnesium-chelatase subunit ChlH, chloroplastic (EC:6.6.1.1)
Short name:
Mg-chelatase subunit H
Alternative name(s):
ABA-binding protein
Mg-protoporphyrin IX chelatase subunit ChlH
Protein CONDITIONAL CHLORINA
Protein GENOMES UNCOUPLED 5
Protein RAPID TRANSPIRATION IN DETACHED LEAVES 1
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:CHLH
Synonyms:ABAR, CCH, GUN5, RTL1
Ordered Locus Names:At5g13630
ORF Names:MSH12.9
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000007605 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componentsi: Chromosome 5, Chromosome 5, ARATH_52
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT5G13630

The Arabidopsis Information Resource

More...
TAIRi
locus:2173234 AT5G13630

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Chloroplast, Membrane, Plastid

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the 'Pathology and Biotech' section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

Pale-green phenotype with low survival rates during de-etiolation and severe embryonic lethality when homozygous. Chli1 and chli2 double mutants are albino.2 Publications

Mutagenesis

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/manual/pathology%5Fand%5Fbiotech%5Fsection">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi642P → L in cch; semi-dwarf plants with pale green leaves and ABA-insensitive stomatal movment. 2 Publications1
Mutagenesisi690L → F in rtl1; semi-dwarf plants with pale green leaves and ABA-insensitive stomatal movment. 2 Publications1
Mutagenesisi990A → V in gun5; semi-dwarf plants with pale green leaves. 1 Publication1

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a transit peptide.<p><a href='/help/transit' target='_top'>More...</a></p>Transit peptidei1 – 49ChloroplastCombined sourcesAdd BLAST49
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000041876550 – 1381Magnesium-chelatase subunit ChlH, chloroplasticAdd BLAST1332

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei50N-acetylalanineCombined sources1

Keywords - PTMi

Acetylation

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9FNB0

PRoteomics IDEntifications database

More...
PRIDEi
Q9FNB0

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q9FNB0

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Widely expressed.1 Publication

<p>This subsection of the 'Expression' section reports the experimentally proven effects of inducers and repressors (usually chemical compounds or environmental factors) on the level of protein (or mRNA) expression (up-regulation, down-regulation, constitutive expression).<p><a href='/help/induction' target='_top'>More...</a></p>Inductioni

By red, far-red and blue light. Down-regulated by white light.1 Publication

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q9FNB0 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q9FNB0 AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

The magnesium chelatase complex is a heterotrimer consisting of subunits CHLI, CHLD, AND CHLH.

Interacts with GUN4, WRKY18, WRKY40, WRKY60, CHLI1 and CHLD.

3 Publications

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
16485, 6 interactors

STRING: functional protein association networks

More...
STRINGi
3702.AT5G13630.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

Secondary structure

11381
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q9FNB0

Database of comparative protein structure models

More...
ModBasei
Search...

Protein Data Bank in Europe - Knowledge Base

More...
PDBe-KBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the Mg-chelatase subunit H family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410IHVQ Eukaryota
COG1429 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_002017_1_2_1

InParanoid: Eukaryotic Ortholog Groups

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InParanoidi
Q9FNB0

KEGG Orthology (KO)

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KOi
K03403

Identification of Orthologs from Complete Genome Data

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OMAi
PWALHGI

Database of Orthologous Groups

More...
OrthoDBi
64867at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q9FNB0

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR011771 BchH
IPR003672 CobN/Mg_chltase
IPR022571 Mg_chelatase_H_N

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF02514 CobN-Mg_chel, 1 hit
PF11965 DUF3479, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR02025 BchH, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 1 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoform i produced by alternative splicing. AlignAdd to basket
Note: A number of isoforms are produced. According to EST sequences.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Isoform 1 (identifier: Q9FNB0-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MASLVYSPFT LSTSKAEHLS SLTNSTKHSF LRKKHRSTKP AKSFFKVKSA
60 70 80 90 100
VSGNGLFTQT NPEVRRIVPI KRDNVPTVKI VYVVLEAQYQ SSLSEAVQSL
110 120 130 140 150
NKTSRFASYE VVGYLVEELR DKNTYNNFCE DLKDANIFIG SLIFVEELAI
160 170 180 190 200
KVKDAVEKER DRMDAVLVFP SMPEVMRLNK LGSFSMSQLG QSKSPFFQLF
210 220 230 240 250
KRKKQGSAGF ADSMLKLVRT LPKVLKYLPS DKAQDARLYI LSLQFWLGGS
260 270 280 290 300
PDNLQNFVKM ISGSYVPALK GVKIEYSDPV LFLDTGIWHP LAPTMYDDVK
310 320 330 340 350
EYWNWYDTRR DTNDSLKRKD ATVVGLVLQR SHIVTGDDSH YVAVIMELEA
360 370 380 390 400
RGAKVVPIFA GGLDFSGPVE KYFVDPVSKQ PIVNSAVSLT GFALVGGPAR
410 420 430 440 450
QDHPRAIEAL KKLDVPYLVA VPLVFQTTEE WLNSTLGLHP IQVALQVALP
460 470 480 490 500
ELDGAMEPIV FAGRDPRTGK SHALHKRVEQ LCIRAIRWGE LKRKTKAEKK
510 520 530 540 550
LAITVFSFPP DKGNVGTAAY LNVFASIFSV LRDLKRDGYN VEGLPENAET
560 570 580 590 600
LIEEIIHDKE AQFSSPNLNV AYKMGVREYQ DLTPYANALE ENWGKPPGNL
610 620 630 640 650
NSDGENLLVY GKAYGNVFIG VQPTFGYEGD PMRLLFSKSA SPHHGFAAYY
660 670 680 690 700
SYVEKIFKAD AVLHFGTHGS LEFMPGKQVG MSDACFPDSL IGNIPNVYYY
710 720 730 740 750
AANNPSEATI AKRRSYANTI SYLTPPAENA GLYKGLKQLS ELISSYQSLK
760 770 780 790 800
DTGRGPQIVS SIISTAKQCN LDKDVDLPDE GLELSPKDRD SVVGKVYSKI
810 820 830 840 850
MEIESRLLPC GLHVIGEPPS AMEAVATLVN IAALDRPEDE ISALPSILAE
860 870 880 890 900
CVGREIEDVY RGSDKGILSD VELLKEITDA SRGAVSAFVE KTTNSKGQVV
910 920 930 940 950
DVSDKLTSLL GFGINEPWVE YLSNTKFYRA NRDKLRTVFG FLGECLKLVV
960 970 980 990 1000
MDNELGSLMQ ALEGKYVEPG PGGDPIRNPK VLPTGKNIHA LDPQAIPTTA
1010 1020 1030 1040 1050
AMASAKIVVE RLVERQKLEN EGKYPETIAL VLWGTDNIKT YGESLGQVLW
1060 1070 1080 1090 1100
MIGVRPIADT FGRVNRVEPV SLEELGRPRI DVVVNCSGVF RDLFINQMNL
1110 1120 1130 1140 1150
LDRAIKMVAE LDEPVEQNFV RKHALEQAEA LGIDIREAAT RVFSNASGSY
1160 1170 1180 1190 1200
SANISLAVEN SSWNDEKQLQ DMYLSRKSFA FDSDAPGAGM AEKKQVFEMA
1210 1220 1230 1240 1250
LSTAEVTFQN LDSSEISLTD VSHYFDSDPT NLVQSLRKDK KKPSSYIADT
1260 1270 1280 1290 1300
TTANAQVRTL SETVRLDART KLLNPKWYEG MMSSGYEGVR EIEKRLSNTV
1310 1320 1330 1340 1350
GWSATSGQVD NWVYEEANST FIQDEEMLNR LMNTNPNSFR KMLQTFLEAN
1360 1370 1380
GRGYWDTSAE NIEKLKELYS QVEDKIEGID R
Length:1,381
Mass (Da):153,574
Last modified:March 1, 2001 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i8EBAD26670A7B336
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A8MR05A8MR05_ARATH
Magnesium-chelatase subunit chlH, c...
GUN5 ABA-BINDING PROTEIN, ABAR, CCH, CCH1, CHLH
1,263Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti224V → G in AAL79577 (PubMed:14593172).Curated1
Sequence conflicti433N → K in CAA92802 (PubMed:8685276).Curated1
Sequence conflicti588A → P in CAA92802 (PubMed:8685276).Curated1
Sequence conflicti739L → V in CAA92802 (PubMed:8685276).Curated1
Sequence conflicti987 – 989NIH → TSI in CAA92802 (PubMed:8685276).Curated3
Sequence conflicti1110 – 1111EL → DV in CAA92802 (PubMed:8685276).Curated2

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
Z68495 mRNA Translation: CAA92802.1
AB006704 Genomic DNA Translation: BAB08689.1
CP002688 Genomic DNA Translation: AED91919.1
AY070133 mRNA Translation: AAL47483.1
AY078971 mRNA Translation: AAL79577.1
BT002311 mRNA Translation: AAN73308.1
AK317719 mRNA Translation: BAH20377.1
AK317718 mRNA Translation: BAH20376.1

Protein sequence database of the Protein Information Resource

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PIRi
S71288

NCBI Reference Sequences

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RefSeqi
NP_196867.1, NM_121366.4 [Q9FNB0-1]

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT5G13630.1; AT5G13630.1; AT5G13630 [Q9FNB0-1]

Database of genes from NCBI RefSeq genomes

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GeneIDi
831207

Gramene; a comparative resource for plants

More...
Gramenei
AT5G13630.1; AT5G13630.1; AT5G13630 [Q9FNB0-1]

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT5G13630

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z68495 mRNA Translation: CAA92802.1
AB006704 Genomic DNA Translation: BAB08689.1
CP002688 Genomic DNA Translation: AED91919.1
AY070133 mRNA Translation: AAL47483.1
AY078971 mRNA Translation: AAL79577.1
BT002311 mRNA Translation: AAN73308.1
AK317719 mRNA Translation: BAH20377.1
AK317718 mRNA Translation: BAH20376.1
PIRiS71288
RefSeqiNP_196867.1, NM_121366.4 [Q9FNB0-1]

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...
PDBei

Protein Data Bank RCSB

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RCSB PDBi

Protein Data Bank Japan

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PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
5EWUX-ray1.25A/B994-1381[»]
SMRiQ9FNB0
ModBaseiSearch...
PDBe-KBiSearch...

Protein-protein interaction databases

BioGridi16485, 6 interactors
STRINGi3702.AT5G13630.1

PTM databases

iPTMnetiQ9FNB0

Proteomic databases

PaxDbiQ9FNB0
PRIDEiQ9FNB0

Genome annotation databases

EnsemblPlantsiAT5G13630.1; AT5G13630.1; AT5G13630 [Q9FNB0-1]
GeneIDi831207
GrameneiAT5G13630.1; AT5G13630.1; AT5G13630 [Q9FNB0-1]
KEGGiath:AT5G13630

Organism-specific databases

AraportiAT5G13630
TAIRilocus:2173234 AT5G13630

Phylogenomic databases

eggNOGiENOG410IHVQ Eukaryota
COG1429 LUCA
HOGENOMiCLU_002017_1_2_1
InParanoidiQ9FNB0
KOiK03403
OMAiPWALHGI
OrthoDBi64867at2759
PhylomeDBiQ9FNB0

Enzyme and pathway databases

UniPathwayiUPA00668
BioCyciMetaCyc:AT5G13630-MONOMER

Miscellaneous databases

Protein Ontology

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PROi
PR:Q9FNB0

Gene expression databases

ExpressionAtlasiQ9FNB0 baseline and differential
GenevisibleiQ9FNB0 AT

Family and domain databases

InterProiView protein in InterPro
IPR011771 BchH
IPR003672 CobN/Mg_chltase
IPR022571 Mg_chelatase_H_N
PfamiView protein in Pfam
PF02514 CobN-Mg_chel, 1 hit
PF11965 DUF3479, 1 hit
TIGRFAMsiTIGR02025 BchH, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCHLH_ARATH
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9FNB0
Secondary accession number(s): B9DI09
, B9DI10, Q39049, Q8RY14
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 5, 2012
Last sequence update: March 1, 2001
Last modified: February 26, 2020
This is version 113 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structure, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families
  4. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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