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Entry version 146 (12 Aug 2020)
Sequence version 2 (03 Nov 2009)
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Protein

LRR receptor-like serine/threonine-protein kinase GSO2

Gene

GSO2

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Together with GSO1, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Involved in the nuclear division phase of megagametogenesis. In coordination with GSO2, regulates root growth through control of cell division and cell fate specification. Controls seedling root growth by modulating sucrose response after germination (PubMed:24123341). Receptor of the peptide hormones CIF1 and CIF2 required for contiguous Casparian strip diffusion barrier formation in roots (PubMed:28104889).4 Publications

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the interaction between a single amino acid and another chemical entity. Priority is given to the annotation of physiological ligands.<p><a href='/help/binding' target='_top'>More...</a></p>Binding sitei976ATPPROSITE-ProRule annotation1
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section is used for enzymes and indicates the residues directly involved in catalysis.<p><a href='/help/act_site' target='_top'>More...</a></p>Active sitei1079Proton acceptorPROSITE-ProRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes a region in the protein which binds nucleotide phosphates. It always involves more than one amino acid and includes all residues involved in nucleotide-binding.<p><a href='/help/np_bind' target='_top'>More...</a></p>Nucleotide bindingi954 – 962ATPPROSITE-ProRule annotation9

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionDevelopmental protein, Kinase, Receptor, Serine/threonine-protein kinase, Transferase
Biological processCell wall biogenesis/degradation
LigandATP-binding, Nucleotide-binding

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
LRR receptor-like serine/threonine-protein kinase GSO21 Publication (EC:2.7.11.1PROSITE-ProRule annotation)
Alternative name(s):
Protein EMBRYO SAC DEVELOPMENT ARREST 231 Publication
Protein GASSHO 21 Publication
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:GSO21 Publication
Synonyms:EDA231 Publication
Ordered Locus Names:At5g44700Imported
ORF Names:K23L20.3Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 5

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT5G44700

The Arabidopsis Information Resource

More...
TAIRi
locus:2156349, AT5G44700

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the subcellular compartment where each non-membrane region of a membrane-spanning protein is found.<p><a href='/help/topo_dom' target='_top'>More...</a></p>Topological domaini23 – 876ExtracellularSequence analysisAdd BLAST854
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei877 – 897HelicalSequence analysisAdd BLAST21
Topological domaini898 – 1252CytoplasmicSequence analysisAdd BLAST355

Keywords - Cellular componenti

Cell membrane, Membrane

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the 'Pathology and Biotech' section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

No visible phenotype during embryogenesis and seedling development. Arrested at two-nuclear stage and unfused polar nuclei. Gso1 and gso2 double mutants produce slightly contorted seeds, with abnormally shaped embryos and seedlings; adhesion between cotyledons and the peripheral tissue of the endosperm, short hypocotyl, and concave cotyledons sometimes fused, with compressed epidermal cells, endosperm tissue partially adherent to the surface of the cotyledons, and a rough surface. In addition, seedlings of gso1 gso2 have also root growth and patterning defects characterized by abnormal numbers of cells in longitudinal files and radial cell layers, as well as aberrant stem cell division planes. Root growth arrest and cell divisions defects are rescued by exogenous application of sucrose, but not patterning defects (PubMed:24123341). The double mutant gso1 gso2 exhibits a repeatedly interrupted, discontinuous Casparian strip due to patch-like localization of the CASPs proteins (PubMed:28104889).4 Publications

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 22Sequence analysisAdd BLAST22
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000038751423 – 1252LRR receptor-like serine/threonine-protein kinase GSO2Add BLAST1230

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm%5Fprocessing%5Fsection">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi62N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi77N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi117N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi157N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi214N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi229N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi299N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi336N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi370N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi394N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi407N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi455N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi538N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi554N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi559N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi566N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi709N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi780N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi823N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei945PhosphothreonineBy similarity1
Modified residuei1024PhosphotyrosineBy similarity1
Modified residuei1066PhosphotyrosineBy similarity1
Modified residuei1114PhosphoserineBy similarity1
Modified residuei1124PhosphotyrosineBy similarity1
Modified residuei1131PhosphotyrosineBy similarity1

Keywords - PTMi

Glycoprotein, Phosphoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9FIZ3

PRoteomics IDEntifications database

More...
PRIDEi
Q9FIZ3

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
247183 [Q9FIZ3-1]

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Mostly expressed in siliques, seeds, developing embryos and seedlings, detected in flower buds, but not in roots, leaves or stems.1 Publication

<p>This subsection of the 'Expression' section provides information on the expression of the gene product at various stages of a cell, tissue or organism development. By default, the information is derived from experiments at the mRNA level, unless specified 'at the protein level'.<p><a href='/help/developmental_stage' target='_top'>More...</a></p>Developmental stagei

In flower buds, localized in pollen grains and the separation layer between the bud and the peduncle. During embryogenesis, uniform expression from the globular embryo to the mature cotyledonary embryo, except in the embryo suspensor. After germination, detected in whole cotyledons and in the hypocotyl. Detected in the aerial tissue of 1-3-day-old seedlings, and in the root epidermis and lateral root cap cells. Within the epidermis, mostly expressed in H cells during the first three days after germination (DAG) and becomes restricted to these H cells in mature roots. In the root apical meristem (RAM), mostly confined to the quiescent center (QC) by six DAG. Mostly observed in the outer layers of the mature root and the RAM, including the QC (PubMed:24123341).2 Publications

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q9FIZ3, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q9FIZ3, AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts with CIF1 and CIF2.

1 Publication

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...
BioGRIDi
19749, 7 interactors

STRING: functional protein association networks

More...
STRINGi
3702.AT5G44700.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q9FIZ3

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati94 – 118LRR 1Sequence analysisAdd BLAST25
Repeati120 – 143LRR 2Sequence analysisAdd BLAST24
Repeati144 – 166LRR 3Sequence analysisAdd BLAST23
Repeati168 – 190LRR 4Sequence analysisAdd BLAST23
Repeati191 – 215LRR 5Sequence analysisAdd BLAST25
Repeati217 – 239LRR 6Sequence analysisAdd BLAST23
Repeati240 – 263LRR 7Sequence analysisAdd BLAST24
Repeati265 – 286LRR 8Sequence analysisAdd BLAST22
Repeati287 – 310LRR 9Sequence analysisAdd BLAST24
Repeati312 – 335LRR 10Sequence analysisAdd BLAST24
Repeati337 – 360LRR 11Sequence analysisAdd BLAST24
Repeati361 – 384LRR 12Sequence analysisAdd BLAST24
Repeati386 – 408LRR 13Sequence analysisAdd BLAST23
Repeati409 – 433LRR 14Sequence analysisAdd BLAST25
Repeati435 – 456LRR 15Sequence analysisAdd BLAST22
Repeati457 – 480LRR 16Sequence analysisAdd BLAST24
Repeati481 – 504LRR 17Sequence analysisAdd BLAST24
Repeati506 – 528LRR 18Sequence analysisAdd BLAST23
Repeati529 – 552LRR 19Sequence analysisAdd BLAST24
Repeati554 – 575LRR 20Sequence analysisAdd BLAST22
Repeati577 – 599LRR 21Sequence analysisAdd BLAST23
Repeati600 – 622LRR 22Sequence analysisAdd BLAST23
Repeati623 – 648LRR 23Sequence analysisAdd BLAST26
Repeati650 – 670LRR 24Sequence analysisAdd BLAST21
Repeati671 – 695LRR 25Sequence analysisAdd BLAST25
Repeati697 – 719LRR 26Sequence analysisAdd BLAST23
Repeati720 – 743LRR 27Sequence analysisAdd BLAST24
Repeati745 – 767LRR 28Sequence analysisAdd BLAST23
Repeati768 – 792LRR 29Sequence analysisAdd BLAST25
Repeati793 – 816LRR 30Sequence analysisAdd BLAST24
Repeati818 – 839LRR 31Sequence analysisAdd BLAST22
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini948 – 1232Protein kinasePROSITE-ProRule annotationAdd BLAST285

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.PROSITE-ProRule annotation

Keywords - Domaini

Leucine-rich repeat, Repeat, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG502QRD1, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_000288_22_1_1

InParanoid: Eukaryotic Ortholog Groups

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InParanoidi
Q9FIZ3

Identification of Orthologs from Complete Genome Data

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OMAi
RIAHMDS

Database of Orthologous Groups

More...
OrthoDBi
826997at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q9FIZ3

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.80.10.10, 7 hits

Integrated resource of protein families, domains and functional sites

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InterProi
View protein in InterPro
IPR011009, Kinase-like_dom_sf
IPR001611, Leu-rich_rpt
IPR003591, Leu-rich_rpt_typical-subtyp
IPR032675, LRR_dom_sf
IPR013210, LRR_N_plant-typ
IPR000719, Prot_kinase_dom
IPR017441, Protein_kinase_ATP_BS
IPR008271, Ser/Thr_kinase_AS

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF13855, LRR_8, 4 hits
PF08263, LRRNT_2, 1 hit
PF00069, Pkinase, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00369, LRR_TYP, 12 hits
SM00220, S_TKc, 1 hit

Superfamily database of structural and functional annotation

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SUPFAMi
SSF56112, SSF56112, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51450, LRR, 22 hits
PS00107, PROTEIN_KINASE_ATP, 1 hit
PS50011, PROTEIN_KINASE_DOM, 1 hit
PS00108, PROTEIN_KINASE_ST, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 1 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform. This section is only present in reviewed entries, i.e. in UniProtKB/Swiss-Prot.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoform i produced by alternative splicing. AlignAdd to basket
Note: A number of isoforms are produced. According to EST sequences.
Isoform 1 (identifier: Q9FIZ3-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MQQNSVLLAL FFLCFSSGLG SGQPGQRDDL QTLLELKNSF ITNPKEEDVL
60 70 80 90 100
RDWNSGSPSY CNWTGVTCGG REIIGLNLSG LGLTGSISPS IGRFNNLIHI
110 120 130 140 150
DLSSNRLVGP IPTTLSNLSS SLESLHLFSN LLSGDIPSQL GSLVNLKSLK
160 170 180 190 200
LGDNELNGTI PETFGNLVNL QMLALASCRL TGLIPSRFGR LVQLQTLILQ
210 220 230 240 250
DNELEGPIPA EIGNCTSLAL FAAAFNRLNG SLPAELNRLK NLQTLNLGDN
260 270 280 290 300
SFSGEIPSQL GDLVSIQYLN LIGNQLQGLI PKRLTELANL QTLDLSSNNL
310 320 330 340 350
TGVIHEEFWR MNQLEFLVLA KNRLSGSLPK TICSNNTSLK QLFLSETQLS
360 370 380 390 400
GEIPAEISNC QSLKLLDLSN NTLTGQIPDS LFQLVELTNL YLNNNSLEGT
410 420 430 440 450
LSSSISNLTN LQEFTLYHNN LEGKVPKEIG FLGKLEIMYL YENRFSGEMP
460 470 480 490 500
VEIGNCTRLQ EIDWYGNRLS GEIPSSIGRL KDLTRLHLRE NELVGNIPAS
510 520 530 540 550
LGNCHQMTVI DLADNQLSGS IPSSFGFLTA LELFMIYNNS LQGNLPDSLI
560 570 580 590 600
NLKNLTRINF SSNKFNGSIS PLCGSSSYLS FDVTENGFEG DIPLELGKST
610 620 630 640 650
NLDRLRLGKN QFTGRIPRTF GKISELSLLD ISRNSLSGII PVELGLCKKL
660 670 680 690 700
THIDLNNNYL SGVIPTWLGK LPLLGELKLS SNKFVGSLPT EIFSLTNILT
710 720 730 740 750
LFLDGNSLNG SIPQEIGNLQ ALNALNLEEN QLSGPLPSTI GKLSKLFELR
760 770 780 790 800
LSRNALTGEI PVEIGQLQDL QSALDLSYNN FTGRIPSTIS TLPKLESLDL
810 820 830 840 850
SHNQLVGEVP GQIGDMKSLG YLNLSYNNLE GKLKKQFSRW QADAFVGNAG
860 870 880 890 900
LCGSPLSHCN RAGSKNQRSL SPKTVVIISA ISSLAAIALM VLVIILFFKQ
910 920 930 940 950
NHDLFKKVRG GNSAFSSNSS SSQAPLFSNG GAKSDIKWDD IMEATHYLNE
960 970 980 990 1000
EFMIGSGGSG KVYKAELKNG ETIAVKKILW KDDLMSNKSF NREVKTLGTI
1010 1020 1030 1040 1050
RHRHLVKLMG YCSSKADGLN LLIYEYMANG SVWDWLHANE NTKKKEVLGW
1060 1070 1080 1090 1100
ETRLKIALGL AQGVEYLHYD CVPPIVHRDI KSSNVLLDSN IEAHLGDFGL
1110 1120 1130 1140 1150
AKILTGNYDT NTESNTMFAG SYGYIAPEYA YSLKATEKSD VYSMGIVLME
1160 1170 1180 1190 1200
IVTGKMPTEA MFDEETDMVR WVETVLDTPP GSEAREKLID SELKSLLPCE
1210 1220 1230 1240 1250
EEAAYQVLEI ALQCTKSYPQ ERPSSRQASE YLLNVFNNRA ASYREMQTDT

DK
Note: No experimental confirmation available.
Length:1,252
Mass (Da):137,532
Last modified:November 3, 2009 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i426A88D45C2C131A
GO

<p>This subsection of the 'Sequence' section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence BAB08823 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
AB016874 Genomic DNA Translation: BAB08823.1 Sequence problems.
CP002688 Genomic DNA Translation: AED95148.1

NCBI Reference Sequences

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RefSeqi
NP_199283.1, NM_123837.3 [Q9FIZ3-1]

Genome annotation databases

Ensembl plant genome annotation project

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EnsemblPlantsi
AT5G44700.1; AT5G44700.1; AT5G44700 [Q9FIZ3-1]

Database of genes from NCBI RefSeq genomes

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GeneIDi
834499

Gramene; a comparative resource for plants

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Gramenei
AT5G44700.1; AT5G44700.1; AT5G44700 [Q9FIZ3-1]

KEGG: Kyoto Encyclopedia of Genes and Genomes

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KEGGi
ath:AT5G44700

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

<p>This subsection of the <a href="http://www.uniprot.org/manual/cross%5Freferences%5Fsection">Cross-references</a> section provides links to various web resources that are relevant for a specific protein.<p><a href='/help/web_resource' target='_top'>More...</a></p>Web resourcesi

PlantP kinase Classification PPC

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB016874 Genomic DNA Translation: BAB08823.1 Sequence problems.
CP002688 Genomic DNA Translation: AED95148.1
RefSeqiNP_199283.1, NM_123837.3 [Q9FIZ3-1]

3D structure databases

SMRiQ9FIZ3
ModBaseiSearch...

Protein-protein interaction databases

BioGRIDi19749, 7 interactors
STRINGi3702.AT5G44700.1

Proteomic databases

PaxDbiQ9FIZ3
PRIDEiQ9FIZ3
ProteomicsDBi247183 [Q9FIZ3-1]

Genome annotation databases

EnsemblPlantsiAT5G44700.1; AT5G44700.1; AT5G44700 [Q9FIZ3-1]
GeneIDi834499
GrameneiAT5G44700.1; AT5G44700.1; AT5G44700 [Q9FIZ3-1]
KEGGiath:AT5G44700

Organism-specific databases

AraportiAT5G44700
TAIRilocus:2156349, AT5G44700

Phylogenomic databases

eggNOGiENOG502QRD1, Eukaryota
HOGENOMiCLU_000288_22_1_1
InParanoidiQ9FIZ3
OMAiRIAHMDS
OrthoDBi826997at2759
PhylomeDBiQ9FIZ3

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q9FIZ3

Gene expression databases

ExpressionAtlasiQ9FIZ3, baseline and differential
GenevisibleiQ9FIZ3, AT

Family and domain databases

Gene3Di3.80.10.10, 7 hits
InterProiView protein in InterPro
IPR011009, Kinase-like_dom_sf
IPR001611, Leu-rich_rpt
IPR003591, Leu-rich_rpt_typical-subtyp
IPR032675, LRR_dom_sf
IPR013210, LRR_N_plant-typ
IPR000719, Prot_kinase_dom
IPR017441, Protein_kinase_ATP_BS
IPR008271, Ser/Thr_kinase_AS
PfamiView protein in Pfam
PF13855, LRR_8, 4 hits
PF08263, LRRNT_2, 1 hit
PF00069, Pkinase, 1 hit
SMARTiView protein in SMART
SM00369, LRR_TYP, 12 hits
SM00220, S_TKc, 1 hit
SUPFAMiSSF56112, SSF56112, 1 hit
PROSITEiView protein in PROSITE
PS51450, LRR, 22 hits
PS00107, PROTEIN_KINASE_ATP, 1 hit
PS50011, PROTEIN_KINASE_DOM, 1 hit
PS00108, PROTEIN_KINASE_ST, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiGSO2_ARATH
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9FIZ3
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 3, 2009
Last sequence update: November 3, 2009
Last modified: August 12, 2020
This is version 146 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
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