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Protein
Submitted name:

Homocysteine-inducible ER protein with ubiquitin-like domain 1

Gene

Herpud1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • ion channel binding Source: ParkinsonsUK-UCL

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Homocysteine-inducible ER protein with ubiquitin-like domain 1Imported
Submitted name:
Homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1Imported
Submitted name:
Homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1, isoform CRA_aImported
Submitted name:
SUPImported
Gene namesi
Name:Herpud1Imported
Synonyms:SUPImported
ORF Names:rCG_39087Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 19

Organism-specific databases

RGDi620818 Herpud1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000018796 Expressed in 10 organ(s), highest expression level in testis

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000025559

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini10 – 72Ubiquitin-likeInterPro annotationAdd BLAST63

Phylogenomic databases

eggNOGiKOG4583 Eukaryota
ENOG410ZJAF LUCA
GeneTreeiENSGT00390000017671
HOGENOMiHOG000252989
HOVERGENiHBG051899
KOiK14027
OMAiANQNMRM
OrthoDBiEOG091G0P9J
TreeFamiTF324319

Family and domain databases

InterProiView protein in InterPro
IPR039751 HERPUD1/2
IPR029071 Ubiquitin-like_domsf
IPR000626 Ubiquitin_dom
PANTHERiPTHR12943 PTHR12943, 1 hit
PfamiView protein in Pfam
PF00240 ubiquitin, 1 hit
SMARTiView protein in SMART
SM00213 UBQ, 1 hit
SUPFAMiSSF54236 SSF54236, 1 hit
PROSITEiView protein in PROSITE
PS50053 UBIQUITIN_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q9ESS9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEPEPQPEPV TLLVKSPNQR HRDLELSGDR GWSVSRLKAH LSRVYPERPR
60 70 80 90 100
PEDQRLIYSG KLLLDHQCLQ DLLPKQEKRH VLHLVCNVRS PSKKPEASTK
110 120 130 140 150
GAESTEQPDN TSQAQYPGDS SSDGLREREV LRNLPPSGWE NVSRPEAVQQ
160 170 180 190 200
TFQGLGPGFS GYTTYGWLQL SWFQQIYARQ YYMQYLAATA ASGAFGPTPS
210 220 230 240 250
AQEIPVVSTP APAPIHNQFP AENQPANQNA AAQAVVNPGA NQNLRMNAQG
260 270 280 290 300
GPLVEEDDEI NRDWLDWTYS AATFSVFLSI LYFYSSLSRF LMVMGATVVM
310 320 330 340 350
YLHHVGWFPF RQRPVQNFPD DGPPQEAANQ DPNNNLQGGL DPEMEDPNRL
360 370 380 390
PVGREVLDPE HTSPSFMSTA WLVFKTFFAS LLPEGPPALA N
Length:391
Mass (Da):43,705
Last modified:March 1, 2001 - v1
Checksum:iFE69D02F3CAA3D1F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07042824 Genomic DNA No translation available.
BC061849 mRNA Translation: AAH61849.1
AB033771 mRNA Translation: BAB16047.1
CH474006 Genomic DNA Translation: EDL87344.1
RefSeqiNP_445975.1, NM_053523.1
UniGeneiRn.4028

Genome annotation databases

EnsembliENSRNOT00000025559; ENSRNOP00000025559; ENSRNOG00000018796
GeneIDi85430
KEGGirno:85430
UCSCiRGD:620818 rat

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07042824 Genomic DNA No translation available.
BC061849 mRNA Translation: AAH61849.1
AB033771 mRNA Translation: BAB16047.1
CH474006 Genomic DNA Translation: EDL87344.1
RefSeqiNP_445975.1, NM_053523.1
UniGeneiRn.4028

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000025559

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000025559; ENSRNOP00000025559; ENSRNOG00000018796
GeneIDi85430
KEGGirno:85430
UCSCiRGD:620818 rat

Organism-specific databases

CTDi9709
RGDi620818 Herpud1

Phylogenomic databases

eggNOGiKOG4583 Eukaryota
ENOG410ZJAF LUCA
GeneTreeiENSGT00390000017671
HOGENOMiHOG000252989
HOVERGENiHBG051899
KOiK14027
OMAiANQNMRM
OrthoDBiEOG091G0P9J
TreeFamiTF324319

Gene expression databases

BgeeiENSRNOG00000018796 Expressed in 10 organ(s), highest expression level in testis

Family and domain databases

InterProiView protein in InterPro
IPR039751 HERPUD1/2
IPR029071 Ubiquitin-like_domsf
IPR000626 Ubiquitin_dom
PANTHERiPTHR12943 PTHR12943, 1 hit
PfamiView protein in Pfam
PF00240 ubiquitin, 1 hit
SMARTiView protein in SMART
SM00213 UBQ, 1 hit
SUPFAMiSSF54236 SSF54236, 1 hit
PROSITEiView protein in PROSITE
PS50053 UBIQUITIN_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ9ESS9_RAT
AccessioniPrimary (citable) accession number: Q9ESS9
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: November 7, 2018
This is version 109 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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