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UniProtKB - Q9E962 (Q9E962_9VIRU)
Protein
Capsid protein
Gene
ORF4
Organism
Ryegrass mottle virus
Status
Names & Taxonomyi
Protein namesi | Recommended name: Capsid proteinARBA annotation |
Gene namesi | Name:ORF4Imported Synonyms:CPImported |
Organismi | Ryegrass mottle virusImported |
Taxonomic identifieri | 119910 [NCBI] |
Taxonomic lineagei | Viruses › Riboviria › Orthornavirae › Pisuviricota › Pisoniviricetes › Sobelivirales › Solemoviridae › Sobemovirus |
Proteomesi |
|
Subcellular locationi
Keywords - Cellular componenti
Capsid protein, T=3 icosahedral capsid proteinARBA annotation, VirionFamily & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 38 – 229 | Viral_coatInterPro annotationAdd BLAST | 192 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 43 | DisorderedSequence analysisAdd BLAST | 43 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 29 – 43 | Polar residuesSequence analysisAdd BLAST | 15 |
Sequence similaritiesi
Belongs to the icosahedral plant coat protein family.ARBA annotation
Family and domain databases
Gene3Di | 2.60.120.20, 1 hit |
InterProi | View protein in InterPro IPR000937, Capsid_prot_S-dom_vir IPR029053, Viral_coat |
Pfami | View protein in Pfam PF00729, Viral_coat, 1 hit |
i Sequence
Sequence statusi: Complete.
Q9E962-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MARKKGKSAS QVIVLKEKSR KKRQKSRGQQ PTRQVTPVSA PAAMGTQITY
60 70 80 90 100
RGPQVVTQYG DITPAKNSGS LVRVTSSATA GTEVSGTVLF NVRNATELPW
110 120 130 140 150
LSGQGSRYSK YRVRYAHFTW EPIVGSNTNG EVAMAMLYDV ADVTSITIER
160 170 180 190 200
LMQTRGGTWG PIWSPTRKRL SYDPEHASLP WYLSGVSSGA AAGNIQTPFQ
210 220 230
IAWAAQSSLV STTLGRIMAE YLVELTDPVD VTINQ
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | EF091714 Genomic RNA Translation: ABN09952.1 AB040446 Genomic RNA Translation: BAB15936.1 |
RefSeqi | YP_007438855.1, NC_003747.2 |
Genome annotation databases
GeneIDi | 944317 |
KEGGi | vg:944317 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | EF091714 Genomic RNA Translation: ABN09952.1 AB040446 Genomic RNA Translation: BAB15936.1 |
RefSeqi | YP_007438855.1, NC_003747.2 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
2IZW | X-ray | 2.90 | A/B/C | 2-235 | [»] | |
SMRi | Q9E962 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Genome annotation databases
GeneIDi | 944317 |
KEGGi | vg:944317 |
Family and domain databases
Gene3Di | 2.60.120.20, 1 hit |
InterProi | View protein in InterPro IPR000937, Capsid_prot_S-dom_vir IPR029053, Viral_coat |
Pfami | View protein in Pfam PF00729, Viral_coat, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | Q9E962_9VIRU | |
Accessioni | Q9E962Primary (citable) accession number: Q9E962 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | March 1, 2001 |
Last sequence update: | March 1, 2001 | |
Last modified: | September 29, 2021 | |
This is version 91 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |