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Protein
Submitted name:

BHLH-WRPW transcription factor

Gene

her9

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • negative regulation of neurogenesis Source: ZFIN
  • regulation of transcription, DNA-templated Source: UniProtKB-UniRule
  • transcription, DNA-templated Source: UniProtKB-UniRule

Keywordsi

Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
BHLH-WRPW transcription factorImported
Submitted name:
Hairy-related 9Imported
Gene namesi
Name:her9Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 23

Organism-specific databases

ZFINiZDB-GENE-011213-1 her9

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Expressioni

Gene expression databases

BgeeiENSDARG00000056438

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000073394

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini34 – 91BHLHInterPro annotationAdd BLAST58
Domaini110 – 143OrangeInterPro annotationAdd BLAST34

Phylogenomic databases

eggNOGiKOG4304 Eukaryota
ENOG4111F0X LUCA
GeneTreeiENSGT00700000104168
HOVERGENiHBG005960
KOiK06054
OMAiFNECMNE
OrthoDBiEOG091G0GBN
TreeFamiTF351373

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR003650 Orange_dom
PfamiView protein in Pfam
PF07527 Hairy_orange, 1 hit
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SM00511 ORANGE, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit
PS51054 ORANGE, 1 hit

Sequencei

Sequence statusi: Complete.

Q9DF41-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPADNMEKQT ASPIAGAPAS GSHTPDKPKN ASEHRKSSKP IMEKRRRARI
60 70 80 90 100
NESLGQLKTL ILDALKKDSS RHSKLEKADI LEMTVKHLRN LQRVQMSAAL
110 120 130 140 150
SADTNVLSKY RAGFNECMNE VTRFLSTCEG VNTEVRSRLL NHLSGCMGQM
160 170 180 190 200
MAMNYPQPAP AQQAHLAQPL HVQLPSTLPI NGASMGSKLS PSEAVSPKVF
210 220 230 240 250
GGFQLVPATD GQFAFLIPNP AFASATTPVI PLYANASVPV TVNASPVQAS
260 270 280 290
SAPTVASPVQ GMTSFSGVPQ AVSPVGVSAG AESNEPVWRP W
Length:291
Mass (Da):31,002
Last modified:March 1, 2001 - v1
Checksum:i817B630F296994A2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR751236 Genomic DNA No translation available.
AF301264 mRNA Translation: AAG23838.1
BC079516 mRNA Translation: AAH79516.1
RefSeqiNP_571948.1, NM_131873.1
UniGeneiDr.78757

Genome annotation databases

EnsembliENSDART00000078936; ENSDARP00000073394; ENSDARG00000056438
ENSDART00000193019; ENSDARP00000151127; ENSDARG00000115775
GeneIDi140613
KEGGidre:140613

Similar proteinsi

Entry informationi

Entry nameiQ9DF41_DANRE
AccessioniPrimary (citable) accession number: Q9DF41
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: June 20, 2018
This is version 126 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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