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Protein

Protein FAM13C

Gene

Fam13c

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Protein FAM13C
Gene namesi
Name:Fam13c
Synonyms:Fam13c1
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 10

Organism-specific databases

MGIiMGI:1918971 Fam13c

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000589231 – 601Protein FAM13CAdd BLAST601

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei130PhosphoserineCombined sources1
Modified residuei258PhosphoserineCombined sources1
Modified residuei405PhosphoserineCombined sources1
Modified residuei406PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiQ9DBR2
PaxDbiQ9DBR2
PRIDEiQ9DBR2

PTM databases

iPTMnetiQ9DBR2
PhosphoSitePlusiQ9DBR2

Expressioni

Gene expression databases

BgeeiENSMUSG00000043259 Expressed in 261 organ(s), highest expression level in primary oocyte
ExpressionAtlasiQ9DBR2 baseline and differential
GenevisibleiQ9DBR2 MM

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000051375

Structurei

3D structure databases

SMRiQ9DBR2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the FAM13 family.Curated

Phylogenomic databases

eggNOGiENOG410IJJ8 Eukaryota
ENOG410YAKN LUCA
GeneTreeiENSGT00440000037511
HOGENOMiHOG000112468
HOVERGENiHBG051530
InParanoidiQ9DBR2
OrthoDBiEOG091G014P
TreeFamiTF328895

Family and domain databases

InterProiView protein in InterPro
IPR039102 FAM13
PANTHERiPTHR15904 PTHR15904, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

Q9DBR2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MFSCFCFSLQ DNSFGSAAVT ECDEDTVSVH EDEDDCSGLR DEDNKENYPQ
60 70 80 90 100
VAARLDELAL PSHEAQQHVE QTLPVDGVLR TSMGNFKSRK PKSILRAESG
110 120 130 140 150
RNHGESQETE HVVPSQSECQ GRAGTPAHES PQSSIFRCQE TVRLQPRIDQ
160 170 180 190 200
RATIWPKDAF GTQQDLHENS LLKLQALESG LCSAFLTTQE EDGQVHGVKD
210 220 230 240 250
PAPASTQSAP ADSADPADPM PAHKDAPGDA DGTSEDLQSA GTSRLLYHIT
260 270 280 290 300
DGDNPLLSPR CSIFSQSQRF NLDPESAPSP PSSQQFMMPR SSSRCGSGDG
310 320 330 340 350
KEPQTITQLT KHIQSLKRKI RKFEEKFEQE KKYRPSHGDK TSNPEVLKWM
360 370 380 390 400
NDLAKGRKQL KELKLKLSEE QGSTPKGPRR NLSCEQPPVP RENGKSEAVG
410 420 430 440 450
PEPGSSGEET SDAVVPEKRE QTPPQDDGKG TKQDKNLIKP LYDRCRGIKQ
460 470 480 490 500
ILPTPSLIPT IQEEEDSDED CPQGSQQPSL PDPVSRLPVG DHLIYSETEP
510 520 530 540 550
VRTLLPDEKK EGKQPALSMS NLHEATMPVL LDHLRETRAD KKRLRKALRE
560 570 580 590 600
FEEQFFKQTG RSPQKEDRMP MADEYCEYKH IKAKLRLLEV LISKQDVAKT

I
Length:601
Mass (Da):66,981
Last modified:July 27, 2011 - v2
Checksum:iAB1CB82F04322BDD
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
G3X9S1G3X9S1_MOUSE
Protein FAM13C
Fam13c 1200015N20Rik, mCG_1002
519Annotation score:
Q8BLV7Q8BLV7_MOUSE
Family with sequence similarity 13,...
Fam13c
600Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti599K → Q in BAB23571 (PubMed:16141072).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK004797 mRNA Translation: BAB23571.1
AC079681 Genomic DNA No translation available.
AC122896 Genomic DNA No translation available.
CH466553 Genomic DNA Translation: EDL31976.1
CCDSiCCDS35932.1
RefSeqiNP_077206.3, NM_024244.4
UniGeneiMm.477813

Genome annotation databases

EnsembliENSMUST00000062883; ENSMUSP00000051375; ENSMUSG00000043259
GeneIDi71721
KEGGimmu:71721
UCSCiuc007fnx.2 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK004797 mRNA Translation: BAB23571.1
AC079681 Genomic DNA No translation available.
AC122896 Genomic DNA No translation available.
CH466553 Genomic DNA Translation: EDL31976.1
CCDSiCCDS35932.1
RefSeqiNP_077206.3, NM_024244.4
UniGeneiMm.477813

3D structure databases

SMRiQ9DBR2
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000051375

PTM databases

iPTMnetiQ9DBR2
PhosphoSitePlusiQ9DBR2

Proteomic databases

MaxQBiQ9DBR2
PaxDbiQ9DBR2
PRIDEiQ9DBR2

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000062883; ENSMUSP00000051375; ENSMUSG00000043259
GeneIDi71721
KEGGimmu:71721
UCSCiuc007fnx.2 mouse

Organism-specific databases

CTDi220965
MGIiMGI:1918971 Fam13c

Phylogenomic databases

eggNOGiENOG410IJJ8 Eukaryota
ENOG410YAKN LUCA
GeneTreeiENSGT00440000037511
HOGENOMiHOG000112468
HOVERGENiHBG051530
InParanoidiQ9DBR2
OrthoDBiEOG091G014P
TreeFamiTF328895

Miscellaneous databases

PROiPR:Q9DBR2
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000043259 Expressed in 261 organ(s), highest expression level in primary oocyte
ExpressionAtlasiQ9DBR2 baseline and differential
GenevisibleiQ9DBR2 MM

Family and domain databases

InterProiView protein in InterPro
IPR039102 FAM13
PANTHERiPTHR15904 PTHR15904, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiFA13C_MOUSE
AccessioniPrimary (citable) accession number: Q9DBR2
Secondary accession number(s): D3YTZ3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 11, 2003
Last sequence update: July 27, 2011
Last modified: November 7, 2018
This is version 88 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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Main funding by: National Institutes of Health

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