UniProtKB - Q9DAH2 (ZNRF4_MOUSE)
Protein
E3 ubiquitin-protein ligase ZNRF4
Gene
Znrf4
Organism
Mus musculus (Mouse)
Status
Functioni
E3 ubiquitin-protein ligase which specifically induces ubiquitination and proteasomal degradation of CANX within the endoplasmic reticulum (By similarity). Could have a role in spermatogenesis (Probable).By similarity1 Publication
Catalytic activityi
- S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.By similarity EC:2.3.2.27
: protein ubiquitination Pathwayi
This protein is involved in the pathway protein ubiquitination, which is part of Protein modification.By similarityView all proteins of this organism that are known to be involved in the pathway protein ubiquitination and in Protein modification.
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Zinc fingeri | 209 – 252 | RING-type; atypicalPROSITE-ProRule annotationAdd BLAST | 44 |
GO - Molecular functioni
- metal ion binding Source: UniProtKB-KW
- ubiquitin protein ligase activity Source: GO_Central
GO - Biological processi
- ubiquitin-dependent protein catabolic process Source: MGI
Keywordsi
Molecular function | Transferase |
Ligand | Metal-binding, Zinc |
Enzyme and pathway databases
UniPathwayi | UPA00143 |
Names & Taxonomyi
Protein namesi | Recommended name: E3 ubiquitin-protein ligase ZNRF4By similarity (EC:2.3.2.27By similarity)Alternative name(s): RING-type E3 ubiquitin transferase ZNRF4 Sperizin1 Publication Zinc/RING finger protein 4By similarity |
Gene namesi | |
Organismi | Mus musculus (Mouse) |
Taxonomic identifieri | 10090 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus |
Proteomesi |
|
Organism-specific databases
MGIi | MGI:1341258, Znrf4 |
Subcellular locationi
Endoplasmic reticulum
- Endoplasmic reticulum membrane By similarity; Single-pass type I membrane protein Curated
Endoplasmic reticulum
- endoplasmic reticulum membrane Source: MGI
Other locations
- cytoplasm Source: MGI
- integral component of membrane Source: UniProtKB-KW
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Topological domaini | 29 – 150 | LumenalCuratedAdd BLAST | 122 | |
Transmembranei | 151 – 171 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 172 – 327 | CytoplasmicCuratedAdd BLAST | 156 |
Keywords - Cellular componenti
Endoplasmic reticulum, MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Signal peptidei | 1 – 28 | Sequence analysisAdd BLAST | 28 | |
ChainiPRO_5004325102 | 29 – 327 | E3 ubiquitin-protein ligase ZNRF4Add BLAST | 299 |
Amino acid modifications
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Glycosylationi | 31 | N-linked (GlcNAc...) asparagineSequence analysis | 1 |
Keywords - PTMi
GlycoproteinProteomic databases
PaxDbi | Q9DAH2 |
PRIDEi | Q9DAH2 |
PTM databases
GlyGeni | Q9DAH2, 1 site |
PhosphoSitePlusi | Q9DAH2 |
Expressioni
Tissue specificityi
Expressed exclusively in spermatids (at protein level).1 Publication
Developmental stagei
Detected in the testis from the postpubertal stage (23 days) onwards, with highest expression at 29 days.1 Publication
Gene expression databases
Bgeei | ENSMUSG00000044526, Expressed in spermatid and 25 other tissues |
Interactioni
Subunit structurei
Interacts with CANX.
By similarityProtein-protein interaction databases
STRINGi | 10090.ENSMUSP00000059715 |
Miscellaneous databases
RNActi | Q9DAH2, protein |
Family & Domainsi
Domaini
The RING-type zinc finger is involved in CANX ubiquitination and degradation, but is not required for interaction with CANX.By similarity
Zinc finger
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Zinc fingeri | 209 – 252 | RING-type; atypicalPROSITE-ProRule annotationAdd BLAST | 44 |
Keywords - Domaini
Signal, Transmembrane, Transmembrane helix, Zinc-fingerPhylogenomic databases
eggNOGi | KOG4628, Eukaryota |
GeneTreei | ENSGT00940000163061 |
HOGENOMi | CLU_035275_1_0_1 |
InParanoidi | Q9DAH2 |
OMAi | CDKSAHV |
OrthoDBi | 1487241at2759 |
PhylomeDBi | Q9DAH2 |
TreeFami | TF317486 |
Family and domain databases
Gene3Di | 3.30.40.10, 1 hit |
InterProi | View protein in InterPro IPR001841, Znf_RING IPR013083, Znf_RING/FYVE/PHD |
Pfami | View protein in Pfam PF13639, zf-RING_2, 1 hit |
SMARTi | View protein in SMART SM00184, RING, 1 hit |
PROSITEi | View protein in PROSITE PS50089, ZF_RING_2, 1 hit |
i Sequence
Sequence statusi: Complete.
: The displayed sequence is further processed into a mature form. Sequence processingi
Q9DAH2-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MARFAWTRVA PVALVTFWLV LSLSPTDAQV NLSSVDFLDL PALLGVPVDP
60 70 80 90 100
KRARGYLLVA RPADACHAIE GPWPDNHSLD PLVLVRPLGC SWEQTGRRAQ
110 120 130 140 150
RAGATAASVG PEAPGQLREF EDLEVTVRCD QPARVLLPHA EPCPDPECHP
160 170 180 190 200
VVVASWALAR ALALAASTLF VLRQLWPWVR GLGSRGTAVK TQTCQKAQVR
210 220 230 240 250
TFTRLSDLCA ICLDDYEEGE RLKILPCAHA YHCRCIDPWF SRAAQRSCPL
260 270 280 290 300
CKQSVASTHD GSTDGSVGGE EPPLPGHRPP IWAIQARLRS RRLELLARTV
310 320
PCRRCSSTTS LGVAENVAQS EATSELS
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 73 | W → G in BAA77407 (PubMed:10191088).Curated | 1 | |
Sequence conflicti | 244 – 246 | AQR → GA in BAA77407 (PubMed:10191088).Curated | 3 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AB016984 mRNA Translation: BAA77407.1 AK005843 mRNA Translation: BAB24269.1 CT485788 Genomic DNA No translation available. BC140986 mRNA Translation: AAI40987.1 |
CCDSi | CCDS28906.1 |
RefSeqi | NP_035613.2, NM_011483.2 |
Genome annotation databases
Ensembli | ENSMUST00000052211; ENSMUSP00000059715; ENSMUSG00000044526 |
GeneIDi | 20834 |
KEGGi | mmu:20834 |
UCSCi | uc008dce.1, mouse |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AB016984 mRNA Translation: BAA77407.1 AK005843 mRNA Translation: BAB24269.1 CT485788 Genomic DNA No translation available. BC140986 mRNA Translation: AAI40987.1 |
CCDSi | CCDS28906.1 |
RefSeqi | NP_035613.2, NM_011483.2 |
3D structure databases
SMRi | Q9DAH2 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 10090.ENSMUSP00000059715 |
PTM databases
GlyGeni | Q9DAH2, 1 site |
PhosphoSitePlusi | Q9DAH2 |
Proteomic databases
PaxDbi | Q9DAH2 |
PRIDEi | Q9DAH2 |
Protocols and materials databases
Antibodypediai | 2299, 111 antibodies |
Genome annotation databases
Ensembli | ENSMUST00000052211; ENSMUSP00000059715; ENSMUSG00000044526 |
GeneIDi | 20834 |
KEGGi | mmu:20834 |
UCSCi | uc008dce.1, mouse |
Organism-specific databases
CTDi | 148066 |
MGIi | MGI:1341258, Znrf4 |
Phylogenomic databases
eggNOGi | KOG4628, Eukaryota |
GeneTreei | ENSGT00940000163061 |
HOGENOMi | CLU_035275_1_0_1 |
InParanoidi | Q9DAH2 |
OMAi | CDKSAHV |
OrthoDBi | 1487241at2759 |
PhylomeDBi | Q9DAH2 |
TreeFami | TF317486 |
Enzyme and pathway databases
UniPathwayi | UPA00143 |
Miscellaneous databases
BioGRID-ORCSi | 20834, 1 hit in 18 CRISPR screens |
PROi | PR:Q9DAH2 |
RNActi | Q9DAH2, protein |
SOURCEi | Search... |
Gene expression databases
Bgeei | ENSMUSG00000044526, Expressed in spermatid and 25 other tissues |
Family and domain databases
Gene3Di | 3.30.40.10, 1 hit |
InterProi | View protein in InterPro IPR001841, Znf_RING IPR013083, Znf_RING/FYVE/PHD |
Pfami | View protein in Pfam PF13639, zf-RING_2, 1 hit |
SMARTi | View protein in SMART SM00184, RING, 1 hit |
PROSITEi | View protein in PROSITE PS50089, ZF_RING_2, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | ZNRF4_MOUSE | |
Accessioni | Q9DAH2Primary (citable) accession number: Q9DAH2 Secondary accession number(s): Q9WTN2 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | February 17, 2016 |
Last sequence update: | June 1, 2001 | |
Last modified: | February 10, 2021 | |
This is version 146 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Chordata Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- MGD cross-references
Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot - PATHWAY comments
Index of metabolic and biosynthesis pathways