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Protein

Histone H2A

Gene

H2al1m

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Histone H2AUniRule annotation
Gene namesi
Name:H2al1mImported
Synonyms:1700012L04RikImported
ORF Names:mCG_113416Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome X

Organism-specific databases

MGIiMGI:1923633 H2al1m

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chromosome, Nucleosome coreUniRule annotation, NucleusUniRule annotation

Expressioni

Gene expression databases

BgeeiENSMUSG00000100200 Expressed in 15 organ(s), highest expression level in testis

Interactioni

Subunit structurei

The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.UniRule annotation

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000136794

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 84HistoneInterPro annotationAdd BLAST82

Sequence similaritiesi

Belongs to the histone H2A family.UniRule annotation

Phylogenomic databases

GeneTreeiENSGT00910000144462
HOGENOMiHOG000234652
HOVERGENiHBG009342
KOiK11251
OrthoDBiEOG091G14WU
TreeFamiTF300137

Family and domain databases

Gene3Di1.10.20.10, 1 hit
InterProiView protein in InterPro
IPR009072 Histone-fold
IPR002119 Histone_H2A
IPR007125 Histone_H2A/H2B/H3
PfamiView protein in Pfam
PF00125 Histone, 1 hit
PRINTSiPR00620 HISTONEH2A
SMARTiView protein in SMART
SM00414 H2A, 1 hit
SUPFAMiSSF47113 SSF47113, 1 hit

Sequencei

Sequence statusi: Complete.

Q9DAD9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAKKMQRRRR QKRTRSQRGE LPLSLVDRFL REEFHSSRLS SSALSFLTSV
60 70 80 90 100
LEYLTSNILE LAGEVAHTTG RKRVTPEDVR LVVQNNEQLR QLFKPGGTSV

NEDDN
Length:105
Mass (Da):12,113
Last modified:June 1, 2001 - v1
Checksum:iC5CD9336F159CAB8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL672060 Genomic DNA No translation available.
AK005922 mRNA Translation: BAB24318.1
CH466584 Genomic DNA Translation: EDL35657.1
RefSeqiNP_083864.1, NM_029588.3
UniGeneiMm.440761

Genome annotation databases

EnsembliENSMUST00000073949; ENSMUSP00000073605; ENSMUSG00000100200
GeneIDi76383
KEGGimmu:76383
UCSCiuc009spr.1 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL672060 Genomic DNA No translation available.
AK005922 mRNA Translation: BAB24318.1
CH466584 Genomic DNA Translation: EDL35657.1
RefSeqiNP_083864.1, NM_029588.3
UniGeneiMm.440761

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000136794

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000073949; ENSMUSP00000073605; ENSMUSG00000100200
GeneIDi76383
KEGGimmu:76383
UCSCiuc009spr.1 mouse

Organism-specific databases

CTDi76383
MGIiMGI:1923633 H2al1m

Phylogenomic databases

GeneTreeiENSGT00910000144462
HOGENOMiHOG000234652
HOVERGENiHBG009342
KOiK11251
OrthoDBiEOG091G14WU
TreeFamiTF300137

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000100200 Expressed in 15 organ(s), highest expression level in testis

Family and domain databases

Gene3Di1.10.20.10, 1 hit
InterProiView protein in InterPro
IPR009072 Histone-fold
IPR002119 Histone_H2A
IPR007125 Histone_H2A/H2B/H3
PfamiView protein in Pfam
PF00125 Histone, 1 hit
PRINTSiPR00620 HISTONEH2A
SMARTiView protein in SMART
SM00414 H2A, 1 hit
SUPFAMiSSF47113 SSF47113, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ9DAD9_MOUSE
AccessioniPrimary (citable) accession number: Q9DAD9
Secondary accession number(s): B1AV31
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: September 12, 2018
This is version 141 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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