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Protein

Uncharacterized protein C11orf52 homolog

Gene
N/A
Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C11orf52 homolog
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 9

Organism-specific databases

MGIiMGI:1914202 2310030G06Rik

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002636101 – 127Uncharacterized protein C11orf52 homologAdd BLAST127

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei30PhosphothreonineBy similarity1
Modified residuei63PhosphoserineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ9D8L0
PRIDEiQ9D8L0

PTM databases

iPTMnetiQ9D8L0
PhosphoSitePlusiQ9D8L0

Expressioni

Gene expression databases

BgeeiENSMUSG00000032062 Expressed in 203 organ(s), highest expression level in placenta
CleanExiMM_2310030G06RIK
GenevisibleiQ9D8L0 MM

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000034564

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410J1Z4 Eukaryota
ENOG4111D7Z LUCA
GeneTreeiENSGT00390000015195
HOGENOMiHOG000111731
HOVERGENiHBG081214
InParanoidiQ9D8L0
OMAiESNLHYA
OrthoDBiEOG091G0PJC
PhylomeDBiQ9D8L0
TreeFamiTF336887

Family and domain databases

InterProiView protein in InterPro
IPR028106 DUF4578
PANTHERiPTHR37342 PTHR37342, 1 hit
PfamiView protein in Pfam
PF15147 DUF4578, 1 hit

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: Q9D8L0-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MGNRLCCGGT WSCPSTFQKK SKTGSHPRPT LSILKQQQLW QNGTKDYETT
60 70 80 90 100
APTYEQVLYP PASQKKTSNS TSEESDLHYA DIHVLRQIRP HSLHTVKCLH
110 120
SESATEYATL RFPQATPQYD SNNGTLV
Length:127
Mass (Da):14,283
Last modified:June 1, 2001 - v1
Checksum:iC4CEB04B162CD354
GO
Isoform 2 (identifier: Q9D8L0-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-1: M → MSENQLGSLGDTTAM

Show »
Length:141
Mass (Da):15,688
Checksum:iFCB6C1B75D6CDD7E
GO

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_0218751M → MSENQLGSLGDTTAM in isoform 2. 2 Publications1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK007611 mRNA Translation: BAB25134.1
AK007929 mRNA Translation: BAB25356.1
AK009541 mRNA Translation: BAB26348.1
BC027409 mRNA Translation: AAH27409.1
CCDSiCCDS23170.1 [Q9D8L0-2]
RefSeqiNP_080141.1, NM_025865.2 [Q9D8L0-2]
UniGeneiMm.273375

Genome annotation databases

EnsembliENSMUST00000034564; ENSMUSP00000034564; ENSMUSG00000032062 [Q9D8L0-2]
GeneIDi66952
KEGGimmu:66952
UCSCiuc009pki.1 mouse [Q9D8L0-2]

Keywords - Coding sequence diversityi

Alternative splicing

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK007611 mRNA Translation: BAB25134.1
AK007929 mRNA Translation: BAB25356.1
AK009541 mRNA Translation: BAB26348.1
BC027409 mRNA Translation: AAH27409.1
CCDSiCCDS23170.1 [Q9D8L0-2]
RefSeqiNP_080141.1, NM_025865.2 [Q9D8L0-2]
UniGeneiMm.273375

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000034564

PTM databases

iPTMnetiQ9D8L0
PhosphoSitePlusiQ9D8L0

Proteomic databases

PaxDbiQ9D8L0
PRIDEiQ9D8L0

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000034564; ENSMUSP00000034564; ENSMUSG00000032062 [Q9D8L0-2]
GeneIDi66952
KEGGimmu:66952
UCSCiuc009pki.1 mouse [Q9D8L0-2]

Organism-specific databases

MGIiMGI:1914202 2310030G06Rik

Phylogenomic databases

eggNOGiENOG410J1Z4 Eukaryota
ENOG4111D7Z LUCA
GeneTreeiENSGT00390000015195
HOGENOMiHOG000111731
HOVERGENiHBG081214
InParanoidiQ9D8L0
OMAiESNLHYA
OrthoDBiEOG091G0PJC
PhylomeDBiQ9D8L0
TreeFamiTF336887

Miscellaneous databases

PROiPR:Q9D8L0

Gene expression databases

BgeeiENSMUSG00000032062 Expressed in 203 organ(s), highest expression level in placenta
CleanExiMM_2310030G06RIK
GenevisibleiQ9D8L0 MM

Family and domain databases

InterProiView protein in InterPro
IPR028106 DUF4578
PANTHERiPTHR37342 PTHR37342, 1 hit
PfamiView protein in Pfam
PF15147 DUF4578, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiCK052_MOUSE
AccessioniPrimary (citable) accession number: Q9D8L0
Secondary accession number(s): Q9CPS4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: June 1, 2001
Last modified: November 7, 2018
This is version 88 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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Main funding by: National Institutes of Health

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