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Protein

Radial spoke head 14 homolog

Gene

Rsph14

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Radial spoke head 14 homolog
Alternative name(s):
Rhabdoid tumor deletion region protein 1
Gene namesi
Name:Rsph14Imported
Synonyms:Rtdr1
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 10

Organism-specific databases

MGIiMGI:1918486 Rsph14

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004329591 – 341Radial spoke head 14 homologAdd BLAST341

Proteomic databases

MaxQBiQ9D3W1
PaxDbiQ9D3W1
PRIDEiQ9D3W1

PTM databases

PhosphoSitePlusiQ9D3W1

Expressioni

Gene expression databases

BgeeiENSMUSG00000009070 Expressed in 37 organ(s), highest expression level in testis
ExpressionAtlasiQ9D3W1 baseline and differential
GenevisibleiQ9D3W1 MM

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000131632

Structurei

3D structure databases

ProteinModelPortaliQ9D3W1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati16 – 55ARM 1Sequence analysisAdd BLAST40
Repeati57 – 96ARM 2Sequence analysisAdd BLAST40
Repeati99 – 138ARM 3Sequence analysisAdd BLAST40
Repeati139 – 178ARM 4Sequence analysisAdd BLAST40
Repeati180 – 217ARM 5Sequence analysisAdd BLAST38
Repeati219 – 258ARM 6Sequence analysisAdd BLAST40
Repeati260 – 300ARM 7Sequence analysisAdd BLAST41
Repeati302 – 339ARM 8Sequence analysisAdd BLAST38

Sequence similaritiesi

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiKOG0167 Eukaryota
ENOG410XRTN LUCA
GeneTreeiENSGT00500000044989
HOGENOMiHOG000006865
HOVERGENiHBG076388
PhylomeDBiQ9D3W1

Family and domain databases

Gene3Di1.25.10.10, 1 hit
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR000225 Armadillo
PfamiView protein in Pfam
PF00514 Arm, 2 hits
SMARTiView protein in SMART
SM00185 ARM, 4 hits
SUPFAMiSSF48371 SSF48371, 1 hit
PROSITEiView protein in PROSITE
PS50176 ARM_REPEAT, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 4 potential isoforms that are computationally mapped.Show allAlign All

Q9D3W1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAHARISMYM PPDIDPTKAA IAYGCRALSK LNEELQSRDL LTRQKALVAL
60 70 80 90 100
CDLMHDPEYV YEAINIGCLE SLKTLLQDDD NLVRIKTTEV LYIMATHYVG
110 120 130 140 150
RVGFLKHDII QALSLLLSDH QTLCRENLHQ AYKHLAQLPK GAQGIVQSGL
160 170 180 190 200
IPSLVRKLQK EEDHIQEIIL DTLALCLQED ATEALESQAV PCLKEKLLSQ
210 220 230 240 250
NSEIRSKAAR ALIAISIPLD GKNQVWKNKV IPILVTLLSD TDEEVKANAA
260 270 280 290 300
GALMHATVTT EGKYAALDAN AIEPLLELLS TNPKTKLCLN ATKALTMLAE
310 320 330 340
APEGRKLLLS HVPIFRYLLA HKNEAIQRAA EVAIKVIEWK P
Length:341
Mass (Da):37,809
Last modified:June 1, 2001 - v1
Checksum:iD0093868603C9B9B
GO

Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
E9PWZ8E9PWZ8_MOUSE
Radial spoke head 14 homolog
Rsph14 Rtdr1
374Annotation score:
E0CYZ0E0CYZ0_MOUSE
Radial spoke head 14 homolog
Rsph14
161Annotation score:
E0CXH7E0CXH7_MOUSE
Radial spoke head 14 homolog
Rsph14
226Annotation score:
E9Q6E1E9Q6E1_MOUSE
Radial spoke head 14 homolog
Rsph14
154Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK017008 mRNA Translation: BAB30547.1
AC142500 Genomic DNA No translation available.
CH466553 Genomic DNA Translation: EDL31936.1
BC147792 mRNA Translation: AAI47793.1
BC147801 mRNA Translation: AAI47802.1
CCDSiCCDS48596.1
RefSeqiNP_001157005.1, NM_001163533.1
NP_001157006.1, NM_001163534.1
NP_001157007.1, NM_001163535.1
NP_082006.1, NM_027730.1
UniGeneiMm.414817

Genome annotation databases

EnsembliENSMUST00000009214; ENSMUSP00000009214; ENSMUSG00000009070
ENSMUST00000179546; ENSMUSP00000136715; ENSMUSG00000009070
GeneIDi71236
KEGGimmu:71236
UCSCiuc007fps.1 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK017008 mRNA Translation: BAB30547.1
AC142500 Genomic DNA No translation available.
CH466553 Genomic DNA Translation: EDL31936.1
BC147792 mRNA Translation: AAI47793.1
BC147801 mRNA Translation: AAI47802.1
CCDSiCCDS48596.1
RefSeqiNP_001157005.1, NM_001163533.1
NP_001157006.1, NM_001163534.1
NP_001157007.1, NM_001163535.1
NP_082006.1, NM_027730.1
UniGeneiMm.414817

3D structure databases

ProteinModelPortaliQ9D3W1
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000131632

PTM databases

PhosphoSitePlusiQ9D3W1

Proteomic databases

MaxQBiQ9D3W1
PaxDbiQ9D3W1
PRIDEiQ9D3W1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000009214; ENSMUSP00000009214; ENSMUSG00000009070
ENSMUST00000179546; ENSMUSP00000136715; ENSMUSG00000009070
GeneIDi71236
KEGGimmu:71236
UCSCiuc007fps.1 mouse

Organism-specific databases

CTDi27156
MGIiMGI:1918486 Rsph14

Phylogenomic databases

eggNOGiKOG0167 Eukaryota
ENOG410XRTN LUCA
GeneTreeiENSGT00500000044989
HOGENOMiHOG000006865
HOVERGENiHBG076388
PhylomeDBiQ9D3W1

Miscellaneous databases

PROiPR:Q9D3W1
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000009070 Expressed in 37 organ(s), highest expression level in testis
ExpressionAtlasiQ9D3W1 baseline and differential
GenevisibleiQ9D3W1 MM

Family and domain databases

Gene3Di1.25.10.10, 1 hit
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR000225 Armadillo
PfamiView protein in Pfam
PF00514 Arm, 2 hits
SMARTiView protein in SMART
SM00185 ARM, 4 hits
SUPFAMiSSF48371 SSF48371, 1 hit
PROSITEiView protein in PROSITE
PS50176 ARM_REPEAT, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRSP14_MOUSE
AccessioniPrimary (citable) accession number: Q9D3W1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 29, 2015
Last sequence update: June 1, 2001
Last modified: September 12, 2018
This is version 109 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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Main funding by: National Institutes of Health

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