UniProtKB - Q9D3S3 (SNX29_MOUSE)
Protein
Sorting nexin-29
Gene
Snx29
Organism
Mus musculus (Mouse)
Status
Names & Taxonomyi
Protein namesi | Recommended name: Sorting nexin-29 |
Gene namesi | Name:Snx29 |
Organismi | Mus musculus (Mouse) |
Taxonomic identifieri | 10090 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus |
Proteomesi |
|
Organism-specific databases
MGIi | MGI:1921728, Snx29 |
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000297566 | 1 – 818 | Sorting nexin-29Add BLAST | 818 |
Amino acid modifications
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Modified residuei | 268 | PhosphoserineCombined sources | 1 | |
Modified residuei | 291 | PhosphoserineCombined sources | 1 | |
Modified residuei | 292 | PhosphoserineCombined sources | 1 | |
Modified residuei | 330 | PhosphoserineCombined sources | 1 | |
Modified residuei | 344 | PhosphoserineCombined sources | 1 | |
Modified residuei | 447 | PhosphoserineCombined sources | 1 | |
Modified residuei | 452 | PhosphoserineCombined sources | 1 | |
Modified residuei | 642 | PhosphoserineCombined sources | 1 | |
Modified residuei | 644 | PhosphothreonineCombined sources | 1 | |
Modified residuei | 645 | PhosphoserineCombined sources | 1 | |
Modified residuei | 649 | PhosphoserineCombined sources | 1 |
Keywords - PTMi
PhosphoproteinProteomic databases
EPDi | Q9D3S3 |
jPOSTi | Q9D3S3 |
PaxDbi | Q9D3S3 |
PRIDEi | Q9D3S3 |
PTM databases
iPTMneti | Q9D3S3 |
PhosphoSitePlusi | Q9D3S3 |
Expressioni
Gene expression databases
Bgeei | ENSMUSG00000071669, Expressed in cortex of kidney and 219 other tissues |
ExpressionAtlasi | Q9D3S3, baseline and differential |
Genevisiblei | Q9D3S3, MM |
Interactioni
Protein-protein interaction databases
STRINGi | 10090.ENSMUSP00000093993 |
Miscellaneous databases
RNActi | Q9D3S3, protein |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 36 – 180 | RUNPROSITE-ProRule annotationAdd BLAST | 145 | |
Domaini | 659 – 782 | PXPROSITE-ProRule annotationAdd BLAST | 124 |
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 467 – 547 | Sequence analysisAdd BLAST | 81 |
Sequence similaritiesi
Belongs to the sorting nexin family.Curated
Keywords - Domaini
Coiled coilPhylogenomic databases
eggNOGi | KOG2101, Eukaryota |
GeneTreei | ENSGT00730000110975 |
HOGENOMi | CLU_020563_1_0_1 |
InParanoidi | Q9D3S3 |
OMAi | HEQERFS |
OrthoDBi | 543799at2759 |
TreeFami | TF352146 |
Family and domain databases
CDDi | cd07277, PX_RUN, 1 hit |
Gene3Di | 1.20.58.900, 1 hit 3.30.1520.10, 1 hit |
InterProi | View protein in InterPro IPR001683, PX_dom IPR036871, PX_dom_sf IPR004012, Run_dom IPR037213, Run_dom_sf IPR037916, SNX29_PX |
Pfami | View protein in Pfam PF00787, PX, 1 hit PF02759, RUN, 1 hit |
SMARTi | View protein in SMART SM00312, PX, 1 hit SM00593, RUN, 1 hit |
SUPFAMi | SSF140741, SSF140741, 1 hit SSF64268, SSF64268, 1 hit |
PROSITEi | View protein in PROSITE PS50195, PX, 1 hit PS50826, RUN, 1 hit |
s (2+)i Sequence
Sequence statusi: Complete.
This entry describes 2 produced by isoformsialternative splicing. AlignAdd to basketThis entry has 2 described isoforms and 3 potential isoforms that are computationally mapped.Show allAlign All
Isoform 1 (identifier: Q9D3S3-1) [UniParc]FASTAAdd to basket
This isoform has been chosen as the sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. canonicali
10 20 30 40 50
MSGSQNDDRR QFLLERLLDA VKQCQIRFGG RKEIASDSDS RVTCLCAQFE
60 70 80 90 100
AVLQHGMKRS RGLALTAAAI KQAAGFTSKT ETEPVFWVYV KEVLNKHELQ
110 120 130 140 150
RFYSLHHITS DAGRGRAWLR CALNEHSLER YLHMLLADRA RLSTFYEDWS
160 170 180 190 200
FVMDEERSSM LPTMAAGLNS ILFAINIDNK DLNGQSKFAP TVSDLLKEST
210 220 230 240 250
QNVTSLLKES TQGMSSLLRE ITASSAVSIL IKPEQETDPL PVISKNVHVD
260 270 280 290 300
TRCKRERRRR KKVTNIVSFD DDEEEQGTGD TLKKMPGTAE SSEENSDRSS
310 320 330 340 350
VNIMAAFEGT FGPNSNGSQS SSSWKIDSAS LNGELGYQKL DVKSIDDDVD
360 370 380 390 400
ENEEDAYRSP LGRGHTGHAE SPDRTLDGNA CLAQVHGWAP LQVLHGDADA
410 420 430 440 450
DTDVLFPVSG VGSYGAADAP VGSLENGTGT ENHIIPEPGL RYREASSPGQ
460 470 480 490 500
GSPLSSLLPS ASVPESMTVH ELRQAIVAMM NRKDELEEEN GSLRNLLDGE
510 520 530 540 550
MEHSAALRQE VDALRRKVTE QQERHATKVQ ALARENEVLK VQLKKYVGAV
560 570 580 590 600
QMLKREGQTA EAVPSLWNVD AEVTVPEQKP GEVAEELASS YERKLIEVAE
610 620 630 640 650
MHGELIEFNE RLHRALVAKE ALVSQMRQEL IDLRGPVPGD LSQTSEDQSL
660 670 680 690 700
SDFEISNRAL INVWIPSVFL RGKAANAFHV YQVYIRIKDD EWNVYRRYTE
710 720 730 740 750
FRALHHQLQS AFPQVRAYSF PPKKAIGNKD AKFVEERRKQ LQSYLRSVMN
760 770 780 790 800
KVIQMVPEFA ANPKKETLVQ LVPFFVDITP PGEPLNKSSR PKAVSRFPKL
810
SRGHPREVRN VEPQSGDL
Computationally mapped potential isoform sequencesi
There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketE9Q6P3 | E9Q6P3_MOUSE | Sorting nexin-29 | Snx29 | 350 | Annotation score: | ||
D3YZ90 | D3YZ90_MOUSE | Sorting nexin-29 | Snx29 | 374 | Annotation score: | ||
A0A0R4J1U3 | A0A0R4J1U3_MOUSE | Sorting nexin-29 | Snx29 | 249 | Annotation score: |
Sequence cautioni
Alternative sequence
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Alternative sequenceiVSP_041966 | 1 – 374 | MSGSQ…ESPDR → MDSLCPVYSGIMIEESAEKP GQELSSDEWLTE in isoform 2. 2 PublicationsAdd BLAST | 374 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AF399755 mRNA Translation: AAK94018.1 AK017102 mRNA Translation: BAB30596.1 AC154233 Genomic DNA No translation available. AC154509 Genomic DNA No translation available. AC165252 Genomic DNA No translation available. AC167720 Genomic DNA No translation available. BC034114 mRNA Translation: AAH34114.1 Sequence problems. |
CCDSi | CCDS27963.2 [Q9D3S3-1] CCDS79422.1 [Q9D3S3-3] |
RefSeqi | NP_001277077.1, NM_001290148.1 [Q9D3S3-3] NP_083240.2, NM_028964.4 [Q9D3S3-1] |
Genome annotation databases
Ensembli | ENSMUST00000096273; ENSMUSP00000093993; ENSMUSG00000071669 [Q9D3S3-3] ENSMUST00000180792; ENSMUSP00000138025; ENSMUSG00000071669 [Q9D3S3-1] |
GeneIDi | 74478 |
KEGGi | mmu:74478 |
UCSCi | uc007yfj.2, mouse [Q9D3S3-3] uc029swd.1, mouse [Q9D3S3-1] |
Keywords - Coding sequence diversityi
Alternative splicingSimilar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AF399755 mRNA Translation: AAK94018.1 AK017102 mRNA Translation: BAB30596.1 AC154233 Genomic DNA No translation available. AC154509 Genomic DNA No translation available. AC165252 Genomic DNA No translation available. AC167720 Genomic DNA No translation available. BC034114 mRNA Translation: AAH34114.1 Sequence problems. |
CCDSi | CCDS27963.2 [Q9D3S3-1] CCDS79422.1 [Q9D3S3-3] |
RefSeqi | NP_001277077.1, NM_001290148.1 [Q9D3S3-3] NP_083240.2, NM_028964.4 [Q9D3S3-1] |
3D structure databases
SMRi | Q9D3S3 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 10090.ENSMUSP00000093993 |
PTM databases
iPTMneti | Q9D3S3 |
PhosphoSitePlusi | Q9D3S3 |
Proteomic databases
EPDi | Q9D3S3 |
jPOSTi | Q9D3S3 |
PaxDbi | Q9D3S3 |
PRIDEi | Q9D3S3 |
Protocols and materials databases
Antibodypediai | 2225, 121 antibodies |
Genome annotation databases
Ensembli | ENSMUST00000096273; ENSMUSP00000093993; ENSMUSG00000071669 [Q9D3S3-3] ENSMUST00000180792; ENSMUSP00000138025; ENSMUSG00000071669 [Q9D3S3-1] |
GeneIDi | 74478 |
KEGGi | mmu:74478 |
UCSCi | uc007yfj.2, mouse [Q9D3S3-3] uc029swd.1, mouse [Q9D3S3-1] |
Organism-specific databases
CTDi | 92017 |
MGIi | MGI:1921728, Snx29 |
Phylogenomic databases
eggNOGi | KOG2101, Eukaryota |
GeneTreei | ENSGT00730000110975 |
HOGENOMi | CLU_020563_1_0_1 |
InParanoidi | Q9D3S3 |
OMAi | HEQERFS |
OrthoDBi | 543799at2759 |
TreeFami | TF352146 |
Miscellaneous databases
BioGRID-ORCSi | 74478, 1 hit in 13 CRISPR screens |
ChiTaRSi | Snx29, mouse |
PROi | PR:Q9D3S3 |
RNActi | Q9D3S3, protein |
SOURCEi | Search... |
Gene expression databases
Bgeei | ENSMUSG00000071669, Expressed in cortex of kidney and 219 other tissues |
ExpressionAtlasi | Q9D3S3, baseline and differential |
Genevisiblei | Q9D3S3, MM |
Family and domain databases
CDDi | cd07277, PX_RUN, 1 hit |
Gene3Di | 1.20.58.900, 1 hit 3.30.1520.10, 1 hit |
InterProi | View protein in InterPro IPR001683, PX_dom IPR036871, PX_dom_sf IPR004012, Run_dom IPR037213, Run_dom_sf IPR037916, SNX29_PX |
Pfami | View protein in Pfam PF00787, PX, 1 hit PF02759, RUN, 1 hit |
SMARTi | View protein in SMART SM00312, PX, 1 hit SM00593, RUN, 1 hit |
SUPFAMi | SSF140741, SSF140741, 1 hit SSF64268, SSF64268, 1 hit |
PROSITEi | View protein in PROSITE PS50195, PX, 1 hit PS50826, RUN, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | SNX29_MOUSE | |
Accessioni | Q9D3S3Primary (citable) accession number: Q9D3S3 Secondary accession number(s): Q8K050 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | August 21, 2007 |
Last sequence update: | October 19, 2011 | |
Last modified: | December 2, 2020 | |
This is version 126 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Chordata Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- MGD cross-references
Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot - SIMILARITY comments
Index of protein domains and families