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Protein

UPF0687 protein C20orf27 homolog

Gene
N/A
Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0687 protein C20orf27 homolog
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:1914576 1700037H04Rik

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00000794202 – 174UPF0687 protein C20orf27 homologAdd BLAST173

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylalanineBy similarity1
Modified residuei147PhosphothreonineCombined sources1

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

EPDiQ9D1K7
MaxQBiQ9D1K7
PaxDbiQ9D1K7
PRIDEiQ9D1K7

2D gel databases

REPRODUCTION-2DPAGEiIPI00133853

PTM databases

iPTMnetiQ9D1K7
PhosphoSitePlusiQ9D1K7

Expressioni

Gene expression databases

BgeeiENSMUSG00000027327 Expressed in 272 organ(s), highest expression level in blood
CleanExiMM_1700037H04RIK
ExpressionAtlasiQ9D1K7 baseline and differential
GenevisibleiQ9D1K7 MM

Interactioni

Protein-protein interaction databases

IntActiQ9D1K7, 1 interactor
MINTiQ9D1K7
STRINGi10090.ENSMUSP00000099477

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0687 family.Curated

Phylogenomic databases

eggNOGiENOG410IXFR Eukaryota
ENOG4111MWE LUCA
GeneTreeiENSGT00390000008711
HOGENOMiHOG000231708
HOVERGENiHBG051155
InParanoidiQ9D1K7
OMAiEHDFYEM
PhylomeDBiQ9D1K7
TreeFamiTF323780

Family and domain databases

InterProiView protein in InterPro
IPR026794 UPF0687
PANTHERiPTHR13287 PTHR13287, 1 hit
PfamiView protein in Pfam
PF15006 DUF4517, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry has 1 described isoform and 4 potential isoforms that are computationally mapped.Show allAlign All

Q9D1K7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAAANRGSKP RVRSIRFAAG HDAEGSQSHV HFDEKLHDSV VMVTQESDNS
60 70 80 90 100
FLVKVGFLKI LHRYEITFTL PPVRRLSKDI RETPVHSLHL KLLSVTPTSE
110 120 130 140 150
GYSIKCEYSA HKEGVLKEEM LLACEGDIGT CVRVTVQARV MDRHHGTPML
160 170
LDGVKCVGAE LEYDSEQSDW LGFD
Length:174
Mass (Da):19,476
Last modified:January 23, 2007 - v3
Checksum:i0AB0BF49970C573C
GO

Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F8WIU1F8WIU1_MOUSE
RIKEN cDNA 1700037H04 gene
1700037H04Rik
177Annotation score:
H7BXB9H7BXB9_MOUSE
RIKEN cDNA 1700037H04 gene
1700037H04Rik
141Annotation score:
Q6IR22Q6IR22_MOUSE
1700037H04Rik protein
1700037H04Rik mCG_18506
70Annotation score:
V9GXT6V9GXT6_MOUSE
RIKEN cDNA 1700037H04 gene
1700037H04Rik
50Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK003406 mRNA Translation: BAB22770.1
BC006041 mRNA Translation: AAH06041.1
CCDSiCCDS16756.1
RefSeqiNP_080367.1, NM_026091.2
XP_011238047.1, XM_011239745.1
UniGeneiMm.27711

Genome annotation databases

EnsembliENSMUST00000103188; ENSMUSP00000099477; ENSMUSG00000027327
GeneIDi67326
KEGGimmu:67326
UCSCiuc008mks.1 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK003406 mRNA Translation: BAB22770.1
BC006041 mRNA Translation: AAH06041.1
CCDSiCCDS16756.1
RefSeqiNP_080367.1, NM_026091.2
XP_011238047.1, XM_011239745.1
UniGeneiMm.27711

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ9D1K7, 1 interactor
MINTiQ9D1K7
STRINGi10090.ENSMUSP00000099477

PTM databases

iPTMnetiQ9D1K7
PhosphoSitePlusiQ9D1K7

2D gel databases

REPRODUCTION-2DPAGEiIPI00133853

Proteomic databases

EPDiQ9D1K7
MaxQBiQ9D1K7
PaxDbiQ9D1K7
PRIDEiQ9D1K7

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000103188; ENSMUSP00000099477; ENSMUSG00000027327
GeneIDi67326
KEGGimmu:67326
UCSCiuc008mks.1 mouse

Organism-specific databases

MGIiMGI:1914576 1700037H04Rik

Phylogenomic databases

eggNOGiENOG410IXFR Eukaryota
ENOG4111MWE LUCA
GeneTreeiENSGT00390000008711
HOGENOMiHOG000231708
HOVERGENiHBG051155
InParanoidiQ9D1K7
OMAiEHDFYEM
PhylomeDBiQ9D1K7
TreeFamiTF323780

Miscellaneous databases

PROiPR:Q9D1K7

Gene expression databases

BgeeiENSMUSG00000027327 Expressed in 272 organ(s), highest expression level in blood
CleanExiMM_1700037H04RIK
ExpressionAtlasiQ9D1K7 baseline and differential
GenevisibleiQ9D1K7 MM

Family and domain databases

InterProiView protein in InterPro
IPR026794 UPF0687
PANTHERiPTHR13287 PTHR13287, 1 hit
PfamiView protein in Pfam
PF15006 DUF4517, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiCT027_MOUSE
AccessioniPrimary (citable) accession number: Q9D1K7
Secondary accession number(s): Q9CVT3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 10, 2003
Last sequence update: January 23, 2007
Last modified: November 7, 2018
This is version 99 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries
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Main funding by: National Institutes of Health

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