Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

39S ribosomal protein L55, mitochondrial

Gene

Mrpl55

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-MMU-5389840 Mitochondrial translation elongation
R-MMU-5419276 Mitochondrial translation termination

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L55, mitochondrial
Short name:
L55mt
Short name:
MRP-L55
Gene namesi
Name:Mrpl55
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:1914462 Mrpl55

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 32MitochondrionSequence analysisAdd BLAST32
ChainiPRO_000027310033 – 12739S ribosomal protein L55, mitochondrialAdd BLAST95

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei84PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

EPDiQ9CZ83
PaxDbiQ9CZ83
PeptideAtlasiQ9CZ83
PRIDEiQ9CZ83

PTM databases

iPTMnetiQ9CZ83
PhosphoSitePlusiQ9CZ83

Expressioni

Gene expression databases

BgeeiENSMUSG00000036860 Expressed in 244 organ(s), highest expression level in heart
CleanExiMM_MRPL55
GenevisibleiQ9CZ83 MM

Interactioni

Subunit structurei

Component of the mitochondrial ribosome large subunit (39S) which comprises a 16S rRNA and about 50 distinct proteins.By similarity

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000048814

Structurei

3D structure databases

ProteinModelPortaliQ9CZ83
SMRiQ9CZ83
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG4616 Eukaryota
ENOG41124VE LUCA
GeneTreeiENSGT00390000010309
HOGENOMiHOG000006834
HOVERGENiHBG080171
InParanoidiQ9CZ83
KOiK17436
OMAiFWARTKK
OrthoDBiEOG091G11CW
PhylomeDBiQ9CZ83
TreeFamiTF320422

Family and domain databases

InterProiView protein in InterPro
IPR018615 Ribosomal_L55_mit
PANTHERiPTHR34095 PTHR34095, 1 hit
PfamiView protein in Pfam
PF09776 Mitoc_L55, 1 hit

Sequences (2)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: Q9CZ83-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MPLAILLSLL RHCGVRAALP TPRHLHTSPW RADCSRASLT RLRRQAYARL
60 70 80 90 100
YPVLLVKQDG STIHIRYREP RRMLAMPLDL DALSPEERRA RFRKREAQLQ
110 120
QKREEEPEVV DSFDTERYKQ FWTKTKK
Length:127
Mass (Da):15,122
Last modified:June 1, 2001 - v1
Checksum:iA4ED7AA477DD0605
GO
Isoform 2 (identifier: Q9CZ83-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     7-7: L → LSACTSVR

Note: No experimental confirmation available.
Show »
Length:134
Mass (Da):15,826
Checksum:i1E24CC3ED2EA7343
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti18A → P in AAH28538 (PubMed:15489334).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_0224787L → LSACTSVR in isoform 2. 1 Publication1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK012885 mRNA Translation: BAB28535.1
BC028538 mRNA Translation: AAH28538.1
CCDSiCCDS24763.1 [Q9CZ83-1]
CCDS78955.1 [Q9CZ83-2]
RefSeqiNP_001289263.1, NM_001302334.1 [Q9CZ83-2]
NP_001289264.1, NM_001302335.1 [Q9CZ83-2]
NP_001289265.1, NM_001302336.1 [Q9CZ83-1]
NP_080311.1, NM_026035.3 [Q9CZ83-1]
XP_006534035.1, XM_006533972.2
XP_006534037.1, XM_006533974.3 [Q9CZ83-2]
XP_006534038.1, XM_006533975.3 [Q9CZ83-2]
XP_006534039.1, XM_006533976.3 [Q9CZ83-2]
XP_006534041.1, XM_006533978.3
UniGeneiMm.282694

Genome annotation databases

EnsembliENSMUST00000045697; ENSMUSP00000048814; ENSMUSG00000036860 [Q9CZ83-1]
ENSMUST00000108784; ENSMUSP00000104412; ENSMUSG00000036860 [Q9CZ83-2]
ENSMUST00000108785; ENSMUSP00000104413; ENSMUSG00000036860 [Q9CZ83-1]
ENSMUST00000108786; ENSMUSP00000104414; ENSMUSG00000036860 [Q9CZ83-2]
ENSMUST00000108787; ENSMUSP00000104415; ENSMUSG00000036860 [Q9CZ83-2]
GeneIDi67212
KEGGimmu:67212
UCSCiuc007jdi.2 mouse [Q9CZ83-1]
uc007jdk.2 mouse [Q9CZ83-2]

Keywords - Coding sequence diversityi

Alternative splicing

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK012885 mRNA Translation: BAB28535.1
BC028538 mRNA Translation: AAH28538.1
CCDSiCCDS24763.1 [Q9CZ83-1]
CCDS78955.1 [Q9CZ83-2]
RefSeqiNP_001289263.1, NM_001302334.1 [Q9CZ83-2]
NP_001289264.1, NM_001302335.1 [Q9CZ83-2]
NP_001289265.1, NM_001302336.1 [Q9CZ83-1]
NP_080311.1, NM_026035.3 [Q9CZ83-1]
XP_006534035.1, XM_006533972.2
XP_006534037.1, XM_006533974.3 [Q9CZ83-2]
XP_006534038.1, XM_006533975.3 [Q9CZ83-2]
XP_006534039.1, XM_006533976.3 [Q9CZ83-2]
XP_006534041.1, XM_006533978.3
UniGeneiMm.282694

3D structure databases

ProteinModelPortaliQ9CZ83
SMRiQ9CZ83
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000048814

PTM databases

iPTMnetiQ9CZ83
PhosphoSitePlusiQ9CZ83

Proteomic databases

EPDiQ9CZ83
PaxDbiQ9CZ83
PeptideAtlasiQ9CZ83
PRIDEiQ9CZ83

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000045697; ENSMUSP00000048814; ENSMUSG00000036860 [Q9CZ83-1]
ENSMUST00000108784; ENSMUSP00000104412; ENSMUSG00000036860 [Q9CZ83-2]
ENSMUST00000108785; ENSMUSP00000104413; ENSMUSG00000036860 [Q9CZ83-1]
ENSMUST00000108786; ENSMUSP00000104414; ENSMUSG00000036860 [Q9CZ83-2]
ENSMUST00000108787; ENSMUSP00000104415; ENSMUSG00000036860 [Q9CZ83-2]
GeneIDi67212
KEGGimmu:67212
UCSCiuc007jdi.2 mouse [Q9CZ83-1]
uc007jdk.2 mouse [Q9CZ83-2]

Organism-specific databases

CTDi128308
MGIiMGI:1914462 Mrpl55

Phylogenomic databases

eggNOGiKOG4616 Eukaryota
ENOG41124VE LUCA
GeneTreeiENSGT00390000010309
HOGENOMiHOG000006834
HOVERGENiHBG080171
InParanoidiQ9CZ83
KOiK17436
OMAiFWARTKK
OrthoDBiEOG091G11CW
PhylomeDBiQ9CZ83
TreeFamiTF320422

Enzyme and pathway databases

ReactomeiR-MMU-5389840 Mitochondrial translation elongation
R-MMU-5419276 Mitochondrial translation termination

Miscellaneous databases

PROiPR:Q9CZ83
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000036860 Expressed in 244 organ(s), highest expression level in heart
CleanExiMM_MRPL55
GenevisibleiQ9CZ83 MM

Family and domain databases

InterProiView protein in InterPro
IPR018615 Ribosomal_L55_mit
PANTHERiPTHR34095 PTHR34095, 1 hit
PfamiView protein in Pfam
PF09776 Mitoc_L55, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRM55_MOUSE
AccessioniPrimary (citable) accession number: Q9CZ83
Secondary accession number(s): Q8R030
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 23, 2007
Last sequence update: June 1, 2001
Last modified: November 7, 2018
This is version 100 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again