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Protein

Protein LBH

Gene

Lbh

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Modulates the activity of key transcription factors involved in cardiogenesis.2 Publications

Miscellaneous

Mice overexpressing Lbh in heart exhibit severe cardiac abnormalities and dysfunction.

GO - Biological processi

Keywordsi

Molecular functionDevelopmental protein
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Protein LBH
Alternative name(s):
Limb bud and heart-expressed protein
Gene namesi
Name:Lbh
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 17

Organism-specific databases

MGIiMGI:1925139 Lbh

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003248031 – 105Protein LBHAdd BLAST105

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei63PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

EPDiQ9CX60
MaxQBiQ9CX60
PaxDbiQ9CX60
PeptideAtlasiQ9CX60
PRIDEiQ9CX60

PTM databases

iPTMnetiQ9CX60
PhosphoSitePlusiQ9CX60

Expressioni

Tissue specificityi

Expressed at highest levels in heart, and at lower levels in brain, spleen, lung, liver and kidney.1 Publication

Developmental stagei

First detected at E7.5 in the mesendoderm that forms the anterior gut and the heart. At midgestation, expressed in the limb bud ectoderm and other specialized epithelia, as well as in the branchial arches and some neural crest derivatives. In the heart, expression initiates in the myocardial plate at the presomitic stage, with highest levels in the anterior myocardium. During heart chamber formation, expressed transiently in the right ventricle, atrioventricular canal and inflow tract. In the limb bud, expression is restricted to the ventral ectodermal compartment and the apical ectodermal ridge.1 Publication

Gene expression databases

BgeeiENSMUSG00000024063 Expressed in 263 organ(s), highest expression level in mesenteric lymph node
CleanExiMM_LBH
ExpressionAtlasiQ9CX60 baseline and differential
GenevisibleiQ9CX60 MM

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000024857

Structurei

3D structure databases

DisProtiDP00661
SMRiQ9CX60
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini18 – 103LBHSequence analysisAdd BLAST86

Sequence similaritiesi

Belongs to the LBH family.Curated

Phylogenomic databases

eggNOGiENOG410IYIC Eukaryota
ENOG4111VQ7 LUCA
GeneTreeiENSGT00390000009189
HOGENOMiHOG000074061
HOVERGENiHBG105431
InParanoidiQ9CX60
OMAiFDRYCKL
OrthoDBiEOG091G12RS
PhylomeDBiQ9CX60
TreeFamiTF332770

Family and domain databases

InterProiView protein in InterPro
IPR013294 LBH
IPR038990 LBH_dom
PfamiView protein in Pfam
PF15317 Lbh, 1 hit
PIRSFiPIRSF008130 LBH, 1 hit
PRINTSiPR01881 LBHPROTEIN

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q9CX60-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSVYFPIHCS DYLRSAEMTE VMMNAPSMEE IGLSPRKDGL SYQIFPDPSD
60 70 80 90 100
FDRCCKLKDR LPSIVVEPTE GEVESGELRW PPEEFLVQED EQDNCEETTN

EKKDQ
Length:105
Mass (Da):12,138
Last modified:June 1, 2001 - v1
Checksum:i0F794B2BAF966EEA
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F6UVG6F6UVG6_MOUSE
Protein LBH
Lbh
56Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti98T → A in AAK38204 (PubMed:11336496).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF317517 mRNA Translation: AAK38204.1
AK020110 mRNA Translation: BAB31998.1
BC026827 mRNA Translation: AAH26827.1
BC052470 mRNA Translation: AAH52470.1
CCDSiCCDS28964.1
RefSeqiNP_084275.3, NM_029999.4
UniGeneiMm.154109

Genome annotation databases

EnsembliENSMUST00000024857; ENSMUSP00000024857; ENSMUSG00000024063
GeneIDi77889
KEGGimmu:77889
UCSCiuc008dng.2 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF317517 mRNA Translation: AAK38204.1
AK020110 mRNA Translation: BAB31998.1
BC026827 mRNA Translation: AAH26827.1
BC052470 mRNA Translation: AAH52470.1
CCDSiCCDS28964.1
RefSeqiNP_084275.3, NM_029999.4
UniGeneiMm.154109

3D structure databases

DisProtiDP00661
SMRiQ9CX60
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000024857

PTM databases

iPTMnetiQ9CX60
PhosphoSitePlusiQ9CX60

Proteomic databases

EPDiQ9CX60
MaxQBiQ9CX60
PaxDbiQ9CX60
PeptideAtlasiQ9CX60
PRIDEiQ9CX60

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000024857; ENSMUSP00000024857; ENSMUSG00000024063
GeneIDi77889
KEGGimmu:77889
UCSCiuc008dng.2 mouse

Organism-specific databases

CTDi81606
MGIiMGI:1925139 Lbh

Phylogenomic databases

eggNOGiENOG410IYIC Eukaryota
ENOG4111VQ7 LUCA
GeneTreeiENSGT00390000009189
HOGENOMiHOG000074061
HOVERGENiHBG105431
InParanoidiQ9CX60
OMAiFDRYCKL
OrthoDBiEOG091G12RS
PhylomeDBiQ9CX60
TreeFamiTF332770

Miscellaneous databases

PROiPR:Q9CX60
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000024063 Expressed in 263 organ(s), highest expression level in mesenteric lymph node
CleanExiMM_LBH
ExpressionAtlasiQ9CX60 baseline and differential
GenevisibleiQ9CX60 MM

Family and domain databases

InterProiView protein in InterPro
IPR013294 LBH
IPR038990 LBH_dom
PfamiView protein in Pfam
PF15317 Lbh, 1 hit
PIRSFiPIRSF008130 LBH, 1 hit
PRINTSiPR01881 LBHPROTEIN
ProtoNetiSearch...

Entry informationi

Entry nameiLBH_MOUSE
AccessioniPrimary (citable) accession number: Q9CX60
Secondary accession number(s): Q99MQ2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 18, 2008
Last sequence update: June 1, 2001
Last modified: November 7, 2018
This is version 120 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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Main funding by: National Institutes of Health

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