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Protein

Zinc finger SWIM domain-containing protein 1

Gene

Zswim1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri333 – 375SWIM-typePROSITE-ProRule annotationAdd BLAST43

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Zinc finger SWIM domain-containing protein 1
Gene namesi
Name:Zswim1
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:1919221 Zswim1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002230961 – 455Zinc finger SWIM domain-containing protein 1Add BLAST455

Proteomic databases

MaxQBiQ9CWV7
PaxDbiQ9CWV7
PRIDEiQ9CWV7

PTM databases

PhosphoSitePlusiQ9CWV7

Expressioni

Gene expression databases

BgeeiENSMUSG00000017764 Expressed in 270 organ(s), highest expression level in placenta
CleanExiMM_ZSWIM1
ExpressionAtlasiQ9CWV7 baseline and differential
GenevisibleiQ9CWV7 MM

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000017908

Structurei

3D structure databases

ProteinModelPortaliQ9CWV7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri333 – 375SWIM-typePROSITE-ProRule annotationAdd BLAST43

Keywords - Domaini

Zinc-finger

Phylogenomic databases

eggNOGiENOG410IK5N Eukaryota
ENOG4111FY6 LUCA
GeneTreeiENSGT00390000017273
HOGENOMiHOG000231003
HOVERGENiHBG099855
InParanoidiQ9CWV7
OMAiIWLAHRW
OrthoDBiEOG091G01A2
PhylomeDBiQ9CWV7
TreeFamiTF335703

Family and domain databases

InterProiView protein in InterPro
IPR007527 Znf_SWIM
PfamiView protein in Pfam
PF04434 SWIM, 1 hit
PROSITEiView protein in PROSITE
PS50966 ZF_SWIM, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q9CWV7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MALTMLNGLL IKDSSPPMLH QISKTPQLDA FNYQSCFMQD LFAHFPEVLF
60 70 80 90 100
IHRTYNPRGK VLYTFLVDGP RVQVEGPLAR AVYFAIPTNE DARGLAQMFQ
110 120 130 140 150
VFKKFNPAWE RVNTILVDPH FLLLPTLTME FPTAEVLLSA FHICKFLQGK
160 170 180 190 200
FYQLPLEQPV QRLLLSSLQS TMCSATAGNL RKLYTLLNNC IPSSRLPELH
210 220 230 240 250
SHWLLNDRIW LAHRWRSRAQ SSRYFQSLEI MAHILSQFFG TTPFEKQGMA
260 270 280 290 300
SVFRYMQQNS SDKASLSLAE TPQDSHTPSE ASAENPNTEQ LVEARIQHSL
310 320 330 340 350
NAICTGPAAQ LCLGELAVVQ KSMHLIGSGS EKMSIQILED THTVQPQPPA
360 370 380 390 400
SCSCYFNQAF HLPCRHILAM LSARQQVLQP DMLPAQWTSG CASSLDSILG
410 420 430 440 450
SKWSASLDKH LAVTLLTEEV GRLLQHCSEE EFERRYSTLR ELADNWIGPY

EQVQL
Length:455
Mass (Da):51,481
Last modified:June 1, 2001 - v1
Checksum:i201886B814EB9CFF
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A2A5J2A2A5J2_MOUSE
Zinc finger SWIM domain-containing ...
Zswim1
146Annotation score:

Sequence cautioni

The sequence AAH25184 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK010358 mRNA Translation: BAB26878.1
AL591495 Genomic DNA No translation available.
BC025184 mRNA Translation: AAH25184.1 Different initiation.
BC046831 mRNA Translation: AAH46831.1
CCDSiCCDS17059.1
RefSeqiNP_082304.1, NM_028028.2
UniGeneiMm.161149

Genome annotation databases

EnsembliENSMUST00000017908; ENSMUSP00000017908; ENSMUSG00000017764
GeneIDi71971
KEGGimmu:71971
UCSCiuc008nwi.1 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK010358 mRNA Translation: BAB26878.1
AL591495 Genomic DNA No translation available.
BC025184 mRNA Translation: AAH25184.1 Different initiation.
BC046831 mRNA Translation: AAH46831.1
CCDSiCCDS17059.1
RefSeqiNP_082304.1, NM_028028.2
UniGeneiMm.161149

3D structure databases

ProteinModelPortaliQ9CWV7
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000017908

PTM databases

PhosphoSitePlusiQ9CWV7

Proteomic databases

MaxQBiQ9CWV7
PaxDbiQ9CWV7
PRIDEiQ9CWV7

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000017908; ENSMUSP00000017908; ENSMUSG00000017764
GeneIDi71971
KEGGimmu:71971
UCSCiuc008nwi.1 mouse

Organism-specific databases

CTDi90204
MGIiMGI:1919221 Zswim1

Phylogenomic databases

eggNOGiENOG410IK5N Eukaryota
ENOG4111FY6 LUCA
GeneTreeiENSGT00390000017273
HOGENOMiHOG000231003
HOVERGENiHBG099855
InParanoidiQ9CWV7
OMAiIWLAHRW
OrthoDBiEOG091G01A2
PhylomeDBiQ9CWV7
TreeFamiTF335703

Miscellaneous databases

PROiPR:Q9CWV7
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000017764 Expressed in 270 organ(s), highest expression level in placenta
CleanExiMM_ZSWIM1
ExpressionAtlasiQ9CWV7 baseline and differential
GenevisibleiQ9CWV7 MM

Family and domain databases

InterProiView protein in InterPro
IPR007527 Znf_SWIM
PfamiView protein in Pfam
PF04434 SWIM, 1 hit
PROSITEiView protein in PROSITE
PS50966 ZF_SWIM, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiZSWM1_MOUSE
AccessioniPrimary (citable) accession number: Q9CWV7
Secondary accession number(s): A2A5J3, Q8R163
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 25, 2003
Last sequence update: June 1, 2001
Last modified: September 12, 2018
This is version 94 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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