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Protein

Glioma pathogenesis-related protein 1

Gene

Glipr1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Enzyme and pathway databases

ReactomeiR-MMU-6798695 Neutrophil degranulation

Names & Taxonomyi

Protein namesi
Recommended name:
Glioma pathogenesis-related protein 1
Short name:
GliPR 1
Gene namesi
Name:Glipr1
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 10

Organism-specific databases

MGIiMGI:1920940 Glipr1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei224 – 244HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 17Sequence analysisAdd BLAST17
ChainiPRO_000000627118 – 255Glioma pathogenesis-related protein 1Add BLAST238

Proteomic databases

EPDiQ9CWG1
MaxQBiQ9CWG1
PaxDbiQ9CWG1
PRIDEiQ9CWG1

PTM databases

PhosphoSitePlusiQ9CWG1

Expressioni

Gene expression databases

BgeeiENSMUSG00000056888
CleanExiMM_GLIPR1
ExpressionAtlasiQ9CWG1 baseline and differential
GenevisibleiQ9CWG1 MM

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000074359

Structurei

3D structure databases

ProteinModelPortaliQ9CWG1
SMRiQ9CWG1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini39 – 164SCPAdd BLAST126

Sequence similaritiesi

Belongs to the CRISP family.Curated

Keywords - Domaini

Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG3017 Eukaryota
COG2340 LUCA
GeneTreeiENSGT00760000119004
HOGENOMiHOG000036879
HOVERGENiHBG072125
InParanoidiQ9CWG1
OMAiYKLHPNF
OrthoDBiEOG091G048D
PhylomeDBiQ9CWG1
TreeFamiTF316148

Family and domain databases

CDDicd05385 SCP_GLIPR-1_like, 1 hit
Gene3Di3.40.33.10, 1 hit
InterProiView protein in InterPro
IPR001283 Allrgn_V5/Tpx1
IPR018244 Allrgn_V5/Tpx1_CS
IPR014044 CAP_domain
IPR035940 CAP_sf
IPR034121 SCP_GLIPR-1-like
IPR002413 V5_allergen
PANTHERiPTHR10334 PTHR10334, 1 hit
PfamiView protein in Pfam
PF00188 CAP, 1 hit
PRINTSiPR00838 V5ALLERGEN
PR00837 V5TPXLIKE
SMARTiView protein in SMART
SM00198 SCP, 1 hit
SUPFAMiSSF55797 SSF55797, 1 hit
PROSITEiView protein in PROSITE
PS01009 CRISP_1, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9CWG1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQVILAVIVW MASSVSSSSF TASTLPDITN EDFIKECVQV HNQLRSKVSP
60 70 80 90 100
PARNMLYMSW DPKLAQIAKA WTKSCEFKHN PQLHSRIHPN FTALGENIWL
110 120 130 140 150
GSLSIFSVSS AISAWYEEIK HYDFSTRKCR HVCGHYTQVV WADSYKLGCA
160 170 180 190 200
VQLCPNGANF ICDYGPAGNY PTWPYKQGAT CSDCPKDDKC LNSLCINPRR
210 220 230 240 250
DQVSRYYSVD YPDWPIYLRN RYTSLFLIAK SVLLLLSVII TIWVKHKYPN

LVLLD
Length:255
Mass (Da):29,129
Last modified:June 1, 2001 - v1
Checksum:iA836ECCB3BACD20A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK010768 mRNA Translation: BAB27168.1
BC025083 mRNA Translation: AAH25083.1
CCDSiCCDS24169.1
RefSeqiNP_082884.1, NM_028608.3
UniGeneiMm.173790

Genome annotation databases

EnsembliENSMUST00000074805; ENSMUSP00000074359; ENSMUSG00000056888
ENSMUST00000162508; ENSMUSP00000123990; ENSMUSG00000056888
GeneIDi73690
KEGGimmu:73690
UCSCiuc007haj.2 mouse

Similar proteinsi

Entry informationi

Entry nameiGLIP1_MOUSE
AccessioniPrimary (citable) accession number: Q9CWG1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 4, 2005
Last sequence update: June 1, 2001
Last modified: February 28, 2018
This is version 113 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

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