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Entry version 122 (16 Oct 2019)
Sequence version 1 (01 Jun 2001)
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Protein

OCIA domain-containing protein 1

Gene

Ociad1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Maintains stem cell potency (PubMed:23972987). Increases STAT3 phosphorylation and controls ERK phosphorylation (PubMed:23972987). May act as a scaffold, increasing STAT3 recruitment onto endosomes (PubMed:23972987).1 Publication

Miscellaneous

'Asrij' stands for 'blood' in Sanskrit as this protein is strongly expressed in blood vessels.

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

  • regulation of stem cell differentiation Source: UniProtKB

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
OCIA domain-containing protein 1
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Ociad1Imported
Synonyms:Asrij
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 5

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

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MGIi
MGI:1915345 Ociad1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Endosome

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002993841 – 247OCIA domain-containing protein 1Add BLAST247

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei108PhosphoserineCombined sources1
Modified residuei116PhosphoserineBy similarity1
Modified residuei123PhosphoserineBy similarity1
Modified residuei193PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

Encyclopedia of Proteome Dynamics

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EPDi
Q9CRD0

jPOST - Japan Proteome Standard Repository/Database

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jPOSTi
Q9CRD0

PaxDb, a database of protein abundance averages across all three domains of life

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PaxDbi
Q9CRD0

PeptideAtlas

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PeptideAtlasi
Q9CRD0

PRoteomics IDEntifications database

More...
PRIDEi
Q9CRD0

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

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iPTMneti
Q9CRD0

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

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PhosphoSitePlusi
Q9CRD0

SwissPalm database of S-palmitoylation events

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SwissPalmi
Q9CRD0

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Expressed at high levels in the brain and at lower levels in the heart, ovary, testis and kidney. Expression is strongest in embryonic stem cells and in the blood vessels.1 Publication

<p>This subsection of the ‘Expression’ section provides information on the expression of the gene product at various stages of a cell, tissue or organism development. By default, the information is derived from experiments at the mRNA level, unless specified ‘at the protein level’.<p><a href='/help/developmental_stage' target='_top'>More...</a></p>Developmental stagei

First detected at 6.5 dpc in the primitive streak region of the epiblast and extraembryonic vasculature. Expression in the 8.5 dpc yolk sac is seen within blood islands and the capillary plexus. As embryogenesis proceeds, expression becomes prominent in the blood islands and the primitive blood vessels of the yolk sac. By 8-8.5 dpc, a more generalized expression pattern is seen in the neural folds and caudally in the presomitic mesoderm and primitive streak regions. A definite increase in vascular expression is seen in the embryo by 9.5 dpc. Tissue-specific expression is initially seen from early 9.5 dpc in the anterior-most regions of the head, mainly in the optic vesicle and branchial arches. At 11.5 dpc and 13.5 dpc, strong expression is seen in the embryonic stem cells of the blood vessels, especially in the capillaries of the brain and in the hyaline vasculature of the eye. Weak expression is also seen in the lingual vessels and in the neural crest-derived regions of the jaw. A rapid increase in expression in the trunk is seen between 9.5 dpc and 10.5 dpc and by 13.5 dpc, expression is more localized. Expression is not detected in the embryonic heart at early 9.5 dpc and from 11.5 dpc onward, increasing expression is seen in the atrium, ventricle, and outflow tracts of the heart.1 Publication

<p>This subsection of the ‘Expression’ section reports the experimentally proven effects of inducers and repressors (usually chemical compounds or environmental factors) on the level of protein (or mRNA) expression (up-regulation, down-regulation, constitutive expression).<p><a href='/help/induction' target='_top'>More...</a></p>Inductioni

Expression is down-regulated as differentiation proceeds in stem cells.1 Publication

Gene expression databases

Bgee dataBase for Gene Expression Evolution

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Bgeei
ENSMUSG00000029152 Expressed in 288 organ(s), highest expression level in cerebral cortex

ExpressionAtlas, Differential and Baseline Expression

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ExpressionAtlasi
Q9CRD0 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

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Genevisiblei
Q9CRD0 MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts with STAT3.

1 Publication

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

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BioGridi
212653, 5 interactors

STRING: functional protein association networks

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STRINGi
10090.ENSMUSP00000031038

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1 – 112OCIAAdd BLAST112

<p>This subsection of the ‘Family and domains’ section provides general information on the biological role of a domain. The term ‘domain’ is intended here in its wide acceptation, it may be a structural domain, a transmembrane region or a functional domain. Several domains are described in this subsection.<p><a href='/help/domain_cc' target='_top'>More...</a></p>Domaini

The OCIA domain is necessary and sufficient for endosomal localization (PubMed:23972987).1 Publication

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the OCIAD1 family.Curated

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

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eggNOGi
ENOG410IZC9 Eukaryota
ENOG4111R9S LUCA

Ensembl GeneTree

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GeneTreei
ENSGT00530000063690

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

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HOGENOMi
HOG000047933

InParanoid: Eukaryotic Ortholog Groups

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InParanoidi
Q9CRD0

Identification of Orthologs from Complete Genome Data

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OMAi
DHVAQGP

Database of Orthologous Groups

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OrthoDBi
1322104at2759

Database for complete collections of gene phylogenies

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PhylomeDBi
Q9CRD0

TreeFam database of animal gene trees

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TreeFami
TF327106

Family and domain databases

Integrated resource of protein families, domains and functional sites

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InterProi
View protein in InterPro
IPR040187 OCAD1/2
IPR009764 OCIA_dom

The PANTHER Classification System

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PANTHERi
PTHR13336 PTHR13336, 1 hit

Pfam protein domain database

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Pfami
View protein in Pfam
PF07051 OCIA, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 3 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 3 described isoforms and 4 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q9CRD0-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MNGRADFREP NAQVSRPIPD IGGGYIPTEE EWRLFAECHE ECFWFRSVPL
60 70 80 90 100
AATSMLITQG LISKGILSSH PKYGSIPKLL FACIVGYFAG KLSYVKTCQE
110 120 130 140 150
KFKKLENSPL GEALRSGELR RSSPPGHYTQ KPKFDSNVSG QSSFGTSPAA
160 170 180 190 200
DNIEKEALPR YEPIPFSASM NESTPTGITD HIAQGPEPNL EESPKRKGVT
210 220 230 240
YEELRSKNRE SYGVTLPHKT DPSVRPMQER VPKKEVKVNK YGDTWDE
Length:247
Mass (Da):27,610
Last modified:June 1, 2001 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i00EDDB3D12B16853
GO
Isoform 2 (identifier: Q9CRD0-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     185-235: Missing.

Show »
Length:196
Mass (Da):21,723
Checksum:i67D0C5981B8E9C62
GO
Isoform 3 (identifier: Q9CRD0-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     186-189: PEPN → RNFS
     190-247: Missing.

Show »
Length:189
Mass (Da):20,849
Checksum:i54842DABE2956997
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0J9YUB6A0A0J9YUB6_MOUSE
OCIA domain-containing protein 1
Ociad1
178Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0J9YUK7A0A0J9YUK7_MOUSE
OCIA domain-containing protein 1
Ociad1
136Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0J9YTV7A0A0J9YTV7_MOUSE
OCIA domain-containing protein 1
Ociad1
37Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0J9YTV6A0A0J9YTV6_MOUSE
OCIA domain-containing protein 1
Ociad1
25Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence BAE39422 differs from that shown. Reason: Frameshift.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti151D → G in BAE41326 (PubMed:16141072).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_027623185 – 235Missing in isoform 2. 1 PublicationAdd BLAST51
Alternative sequenceiVSP_027624186 – 189PEPN → RNFS in isoform 3. 2 Publications4
Alternative sequenceiVSP_027625190 – 247Missing in isoform 3. 2 PublicationsAdd BLAST58

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
AF295357 mRNA Translation: AAG59858.1
AF295358 Genomic DNA Translation: AAG59859.1
AY208935 mRNA Translation: AAP41523.1
AK006013 mRNA Translation: BAB24366.1
AK007636 mRNA Translation: BAB25152.1
AK043603 mRNA Translation: BAC31593.1
AK077904 mRNA Translation: BAC37055.1
AK078102 mRNA Translation: BAC37125.1
AK078909 mRNA Translation: BAC37453.1
AK080795 mRNA Translation: BAC38024.1
AK082769 mRNA Translation: BAC38610.1
AK082781 mRNA Translation: BAC38616.1
AK159811 mRNA Translation: BAE35391.1
AK167320 mRNA Translation: BAE39422.1 Frameshift.
AK169715 mRNA Translation: BAE41326.1
BC006937 mRNA Translation: AAH06937.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS19339.1 [Q9CRD0-1]
CCDS51518.1 [Q9CRD0-3]
CCDS80300.1 [Q9CRD0-2]

NCBI Reference Sequences

More...
RefSeqi
NP_001153359.1, NM_001159887.1 [Q9CRD0-2]
NP_001153360.1, NM_001159888.1 [Q9CRD0-3]
NP_001153361.1, NM_001159889.1 [Q9CRD0-3]
NP_075918.1, NM_023429.4 [Q9CRD0-1]
XP_006504138.1, XM_006504075.3 [Q9CRD0-1]
XP_006504139.1, XM_006504076.3 [Q9CRD0-1]
XP_017176571.1, XM_017321082.1 [Q9CRD0-2]
XP_017176572.1, XM_017321083.1 [Q9CRD0-3]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000031038; ENSMUSP00000031038; ENSMUSG00000029152 [Q9CRD0-1]
ENSMUST00000071081; ENSMUSP00000069412; ENSMUSG00000029152 [Q9CRD0-3]
ENSMUST00000166823; ENSMUSP00000128805; ENSMUSG00000029152 [Q9CRD0-3]
ENSMUST00000200935; ENSMUSP00000144515; ENSMUSG00000029152 [Q9CRD0-2]
ENSMUST00000202250; ENSMUSP00000143799; ENSMUSG00000029152 [Q9CRD0-3]

Database of genes from NCBI RefSeq genomes

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GeneIDi
68095

KEGG: Kyoto Encyclopedia of Genes and Genomes

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KEGGi
mmu:68095

UCSC genome browser

More...
UCSCi
uc008xss.2 mouse [Q9CRD0-1]
uc008xst.2 mouse [Q9CRD0-3]
uc008xsv.2 mouse [Q9CRD0-2]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF295357 mRNA Translation: AAG59858.1
AF295358 Genomic DNA Translation: AAG59859.1
AY208935 mRNA Translation: AAP41523.1
AK006013 mRNA Translation: BAB24366.1
AK007636 mRNA Translation: BAB25152.1
AK043603 mRNA Translation: BAC31593.1
AK077904 mRNA Translation: BAC37055.1
AK078102 mRNA Translation: BAC37125.1
AK078909 mRNA Translation: BAC37453.1
AK080795 mRNA Translation: BAC38024.1
AK082769 mRNA Translation: BAC38610.1
AK082781 mRNA Translation: BAC38616.1
AK159811 mRNA Translation: BAE35391.1
AK167320 mRNA Translation: BAE39422.1 Frameshift.
AK169715 mRNA Translation: BAE41326.1
BC006937 mRNA Translation: AAH06937.1
CCDSiCCDS19339.1 [Q9CRD0-1]
CCDS51518.1 [Q9CRD0-3]
CCDS80300.1 [Q9CRD0-2]
RefSeqiNP_001153359.1, NM_001159887.1 [Q9CRD0-2]
NP_001153360.1, NM_001159888.1 [Q9CRD0-3]
NP_001153361.1, NM_001159889.1 [Q9CRD0-3]
NP_075918.1, NM_023429.4 [Q9CRD0-1]
XP_006504138.1, XM_006504075.3 [Q9CRD0-1]
XP_006504139.1, XM_006504076.3 [Q9CRD0-1]
XP_017176571.1, XM_017321082.1 [Q9CRD0-2]
XP_017176572.1, XM_017321083.1 [Q9CRD0-3]

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

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SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

BioGridi212653, 5 interactors
STRINGi10090.ENSMUSP00000031038

PTM databases

iPTMnetiQ9CRD0
PhosphoSitePlusiQ9CRD0
SwissPalmiQ9CRD0

Proteomic databases

EPDiQ9CRD0
jPOSTiQ9CRD0
PaxDbiQ9CRD0
PeptideAtlasiQ9CRD0
PRIDEiQ9CRD0

Protocols and materials databases

The DNASU plasmid repository

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DNASUi
68095

Genome annotation databases

EnsembliENSMUST00000031038; ENSMUSP00000031038; ENSMUSG00000029152 [Q9CRD0-1]
ENSMUST00000071081; ENSMUSP00000069412; ENSMUSG00000029152 [Q9CRD0-3]
ENSMUST00000166823; ENSMUSP00000128805; ENSMUSG00000029152 [Q9CRD0-3]
ENSMUST00000200935; ENSMUSP00000144515; ENSMUSG00000029152 [Q9CRD0-2]
ENSMUST00000202250; ENSMUSP00000143799; ENSMUSG00000029152 [Q9CRD0-3]
GeneIDi68095
KEGGimmu:68095
UCSCiuc008xss.2 mouse [Q9CRD0-1]
uc008xst.2 mouse [Q9CRD0-3]
uc008xsv.2 mouse [Q9CRD0-2]

Organism-specific databases

Comparative Toxicogenomics Database

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CTDi
54940
MGIiMGI:1915345 Ociad1

Phylogenomic databases

eggNOGiENOG410IZC9 Eukaryota
ENOG4111R9S LUCA
GeneTreeiENSGT00530000063690
HOGENOMiHOG000047933
InParanoidiQ9CRD0
OMAiDHVAQGP
OrthoDBi1322104at2759
PhylomeDBiQ9CRD0
TreeFamiTF327106

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

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ChiTaRSi
Ociad1 mouse

Protein Ontology

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PROi
PR:Q9CRD0

The Stanford Online Universal Resource for Clones and ESTs

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SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000029152 Expressed in 288 organ(s), highest expression level in cerebral cortex
ExpressionAtlasiQ9CRD0 baseline and differential
GenevisibleiQ9CRD0 MM

Family and domain databases

InterProiView protein in InterPro
IPR040187 OCAD1/2
IPR009764 OCIA_dom
PANTHERiPTHR13336 PTHR13336, 1 hit
PfamiView protein in Pfam
PF07051 OCIA, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiOCAD1_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9CRD0
Secondary accession number(s): Q3TEC2
, Q3TJS3, Q7TNB3, Q922M2
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: June 1, 2001
Last modified: October 16, 2019
This is version 122 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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