Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

39S ribosomal protein L20, mitochondrial

Gene

Mrpl20

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • ribosomal large subunit assembly Source: GO_Central
  • translation Source: MGI

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-MMU-5389840 Mitochondrial translation elongation
R-MMU-5419276 Mitochondrial translation termination

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L20, mitochondrial
Short name:
L20mt
Short name:
MRP-L20
Gene namesi
Name:Mrpl20
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 4

Organism-specific databases

MGIiMGI:2137221 Mrpl20

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 9MitochondrionBy similarity9
ChainiPRO_000024828010 – 14939S ribosomal protein L20, mitochondrialAdd BLAST140

Proteomic databases

EPDiQ9CQL4
MaxQBiQ9CQL4
PaxDbiQ9CQL4
PeptideAtlasiQ9CQL4
PRIDEiQ9CQL4

PTM databases

iPTMnetiQ9CQL4
PhosphoSitePlusiQ9CQL4

Expressioni

Gene expression databases

BgeeiENSMUSG00000029066 Expressed in 293 organ(s), highest expression level in submandibular gland
CleanExiMM_MRPL20
ExpressionAtlasiQ9CQL4 baseline and differential
GenevisibleiQ9CQL4 MM

Interactioni

Subunit structurei

Component of the mitochondrial ribosome large subunit (39S) which comprises a 16S rRNA and about 50 distinct proteins (By similarity). Interacts with OXA1L (By similarity).By similarity

Protein-protein interaction databases

BioGridi211482, 1 interactor
STRINGi10090.ENSMUSP00000030942

Structurei

3D structure databases

ProteinModelPortaliQ9CQL4
SMRiQ9CQL4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG4707 Eukaryota
COG0292 LUCA
GeneTreeiENSGT00390000015823
HOGENOMiHOG000035046
HOVERGENiHBG058971
InParanoidiQ9CQL4
KOiK02887
OMAiDLAMNHP
OrthoDBiEOG091G0M7Y
PhylomeDBiQ9CQL4
TreeFamiTF324702

Family and domain databases

CDDicd07026 Ribosomal_L20, 1 hit
Gene3Di1.10.1900.20, 1 hit
InterProiView protein in InterPro
IPR005813 Ribosomal_L20
IPR035566 Ribosomal_protein_L20_C
PANTHERiPTHR10986 PTHR10986, 1 hit
PfamiView protein in Pfam
PF00453 Ribosomal_L20, 1 hit
PRINTSiPR00062 RIBOSOMALL20
SUPFAMiSSF74731 SSF74731, 1 hit
TIGRFAMsiTIGR01032 rplT_bact, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

Q9CQL4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVFLTTRLWL RNRLTDRYWR VQEVLKHAQH FRGRKNRCYR LAVRAVTRAF
60 70 80 90 100
VKCTKARRLK KRNLRTLWIN RITAASQEHG LKYPAFIVNL IKCQVELNRK
110 120 130 140
VLVDLAIYEP KTFKSLAALA KRRQQEGFAA ALGDGKEPEG IFSRVVQYH
Length:149
Mass (Da):17,595
Last modified:June 1, 2001 - v1
Checksum:i7B86D8C568B633AE
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
V9GX65V9GX65_MOUSE
39S ribosomal protein L20, mitochon...
Mrpl20
96Annotation score:
V9GXI7V9GXI7_MOUSE
39S ribosomal protein L20, mitochon...
Mrpl20
112Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti62R → L in BAB29744 (PubMed:16141072).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB049645 mRNA Translation: BAB40850.1
AK004053 mRNA Translation: BAB23143.1
AK011341 mRNA Translation: BAB27555.1
AK015199 mRNA Translation: BAB29744.1
AK168665 mRNA Translation: BAE40517.1
BC039985 mRNA Translation: AAH39985.1
CCDSiCCDS19041.1
RefSeqiNP_079846.1, NM_025570.2
XP_006539167.1, XM_006539104.2
UniGeneiMm.23825
Mm.332146

Genome annotation databases

EnsembliENSMUST00000030942; ENSMUSP00000030942; ENSMUSG00000029066
ENSMUST00000137487; ENSMUSP00000139122; ENSMUSG00000029066
GeneIDi66448
KEGGimmu:66448
UCSCiuc008weu.1 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB049645 mRNA Translation: BAB40850.1
AK004053 mRNA Translation: BAB23143.1
AK011341 mRNA Translation: BAB27555.1
AK015199 mRNA Translation: BAB29744.1
AK168665 mRNA Translation: BAE40517.1
BC039985 mRNA Translation: AAH39985.1
CCDSiCCDS19041.1
RefSeqiNP_079846.1, NM_025570.2
XP_006539167.1, XM_006539104.2
UniGeneiMm.23825
Mm.332146

3D structure databases

ProteinModelPortaliQ9CQL4
SMRiQ9CQL4
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi211482, 1 interactor
STRINGi10090.ENSMUSP00000030942

PTM databases

iPTMnetiQ9CQL4
PhosphoSitePlusiQ9CQL4

Proteomic databases

EPDiQ9CQL4
MaxQBiQ9CQL4
PaxDbiQ9CQL4
PeptideAtlasiQ9CQL4
PRIDEiQ9CQL4

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000030942; ENSMUSP00000030942; ENSMUSG00000029066
ENSMUST00000137487; ENSMUSP00000139122; ENSMUSG00000029066
GeneIDi66448
KEGGimmu:66448
UCSCiuc008weu.1 mouse

Organism-specific databases

CTDi55052
MGIiMGI:2137221 Mrpl20

Phylogenomic databases

eggNOGiKOG4707 Eukaryota
COG0292 LUCA
GeneTreeiENSGT00390000015823
HOGENOMiHOG000035046
HOVERGENiHBG058971
InParanoidiQ9CQL4
KOiK02887
OMAiDLAMNHP
OrthoDBiEOG091G0M7Y
PhylomeDBiQ9CQL4
TreeFamiTF324702

Enzyme and pathway databases

ReactomeiR-MMU-5389840 Mitochondrial translation elongation
R-MMU-5419276 Mitochondrial translation termination

Miscellaneous databases

PROiPR:Q9CQL4
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000029066 Expressed in 293 organ(s), highest expression level in submandibular gland
CleanExiMM_MRPL20
ExpressionAtlasiQ9CQL4 baseline and differential
GenevisibleiQ9CQL4 MM

Family and domain databases

CDDicd07026 Ribosomal_L20, 1 hit
Gene3Di1.10.1900.20, 1 hit
InterProiView protein in InterPro
IPR005813 Ribosomal_L20
IPR035566 Ribosomal_protein_L20_C
PANTHERiPTHR10986 PTHR10986, 1 hit
PfamiView protein in Pfam
PF00453 Ribosomal_L20, 1 hit
PRINTSiPR00062 RIBOSOMALL20
SUPFAMiSSF74731 SSF74731, 1 hit
TIGRFAMsiTIGR01032 rplT_bact, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRM20_MOUSE
AccessioniPrimary (citable) accession number: Q9CQL4
Secondary accession number(s): Q9D5L3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: June 1, 2001
Last modified: September 12, 2018
This is version 130 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again