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Protein

28S ribosomal protein S17, mitochondrial

Gene

Mrps17

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • rRNA binding Source: UniProtKB-KW
  • structural constituent of ribosome Source: UniProtKB

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

ReactomeiR-MMU-5389840 Mitochondrial translation elongation
R-MMU-5419276 Mitochondrial translation termination

Names & Taxonomyi

Protein namesi
Recommended name:
28S ribosomal protein S17, mitochondrial
Short name:
MRP-S17
Short name:
S17mt
Gene namesi
Name:Mrps17
Synonyms:Rpms17
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 5

Organism-specific databases

MGIiMGI:1913508 Mrps17

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 20MitochondrionSequence analysisAdd BLAST20
ChainiPRO_000003062421 – 12028S ribosomal protein S17, mitochondrialAdd BLAST100

Proteomic databases

EPDiQ9CQE3
MaxQBiQ9CQE3
PaxDbiQ9CQE3
PeptideAtlasiQ9CQE3
PRIDEiQ9CQE3

PTM databases

iPTMnetiQ9CQE3
PhosphoSitePlusiQ9CQE3

Expressioni

Gene expression databases

BgeeiENSMUSG00000034211 Expressed in 299 organ(s), highest expression level in liver
CleanExiMM_MRPS17
ExpressionAtlasiQ9CQE3 baseline and differential
GenevisibleiQ9CQE3 MM

Interactioni

Subunit structurei

Component of the mitochondrial ribosome small subunit (28S) which comprises a 12S rRNA and about 30 distinct proteins.By similarity

Protein-protein interaction databases

IntActiQ9CQE3, 1 interactor
MINTiQ9CQE3
STRINGi10090.ENSMUSP00000040281

Structurei

3D structure databases

ProteinModelPortaliQ9CQE3
SMRiQ9CQE3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG3447 Eukaryota
ENOG4111N11 LUCA
GeneTreeiENSGT00530000064130
HOGENOMiHOG000126812
HOVERGENiHBG002498
InParanoidiQ9CQE3
KOiK02961
OMAiHAKWIIG
OrthoDBiEOG091G0QS6
PhylomeDBiQ9CQE3
TreeFamiTF326484

Family and domain databases

InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR000266 Ribosomal_S17/S11
IPR039193 S17mt
PANTHERiPTHR24088 PTHR24088, 1 hit
PfamiView protein in Pfam
PF00366 Ribosomal_S17, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD001295 Ribosomal_S17, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

Q9CQE3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSIVRSSVHA KWVVGKVIGT AMIKTAKVRA TRLVLDPYLL KYFNKRKTYF
60 70 80 90 100
AHDALQQCSV GDIVLLRALP VPRSKHVKHE LAEIIFKVGR VIDPVTGKPC
110 120
AGTAYLESPL SEPREELKVS
Length:120
Mass (Da):13,382
Last modified:April 27, 2001 - v1
Checksum:i98D6C28EDC3065AD
GO

Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
D3Z198D3Z198_MOUSE
28S ribosomal protein S17, mitochon...
Mrps17
87Annotation score:
D3YWF8D3YWF8_MOUSE
28S ribosomal protein S17, mitochon...
Mrps17
75Annotation score:
D3YX95D3YX95_MOUSE
28S ribosomal protein S17, mitochon...
Mrps17
30Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB049951 mRNA Translation: BAB41004.1
AK009568 mRNA Translation: BAB26365.1
AK003008 mRNA Translation: BAB22509.1
AK007356 mRNA Translation: BAB24983.1
BC003890 mRNA Translation: AAH03890.1
CCDSiCCDS19697.1
RefSeqiNP_079726.1, NM_025450.4
XP_006504383.1, XM_006504320.2
XP_006504384.1, XM_006504321.2
XP_006504385.1, XM_006504322.2
XP_006504386.1, XM_006504323.2
XP_006504387.1, XM_006504324.3
XP_011239147.1, XM_011240845.2
UniGeneiMm.249809

Genome annotation databases

EnsembliENSMUST00000042191; ENSMUSP00000040281; ENSMUSG00000034211
ENSMUST00000118420; ENSMUSP00000112993; ENSMUSG00000034211
ENSMUST00000119576; ENSMUSP00000112779; ENSMUSG00000034211
ENSMUST00000119604; ENSMUSP00000114012; ENSMUSG00000034211
ENSMUST00000119985; ENSMUSP00000112762; ENSMUSG00000034211
ENSMUST00000121339; ENSMUSP00000114125; ENSMUSG00000034211
ENSMUST00000121813; ENSMUSP00000114059; ENSMUSG00000034211
GeneIDi66258
KEGGimmu:66258
UCSCiuc008ztb.1 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB049951 mRNA Translation: BAB41004.1
AK009568 mRNA Translation: BAB26365.1
AK003008 mRNA Translation: BAB22509.1
AK007356 mRNA Translation: BAB24983.1
BC003890 mRNA Translation: AAH03890.1
CCDSiCCDS19697.1
RefSeqiNP_079726.1, NM_025450.4
XP_006504383.1, XM_006504320.2
XP_006504384.1, XM_006504321.2
XP_006504385.1, XM_006504322.2
XP_006504386.1, XM_006504323.2
XP_006504387.1, XM_006504324.3
XP_011239147.1, XM_011240845.2
UniGeneiMm.249809

3D structure databases

ProteinModelPortaliQ9CQE3
SMRiQ9CQE3
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ9CQE3, 1 interactor
MINTiQ9CQE3
STRINGi10090.ENSMUSP00000040281

PTM databases

iPTMnetiQ9CQE3
PhosphoSitePlusiQ9CQE3

Proteomic databases

EPDiQ9CQE3
MaxQBiQ9CQE3
PaxDbiQ9CQE3
PeptideAtlasiQ9CQE3
PRIDEiQ9CQE3

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000042191; ENSMUSP00000040281; ENSMUSG00000034211
ENSMUST00000118420; ENSMUSP00000112993; ENSMUSG00000034211
ENSMUST00000119576; ENSMUSP00000112779; ENSMUSG00000034211
ENSMUST00000119604; ENSMUSP00000114012; ENSMUSG00000034211
ENSMUST00000119985; ENSMUSP00000112762; ENSMUSG00000034211
ENSMUST00000121339; ENSMUSP00000114125; ENSMUSG00000034211
ENSMUST00000121813; ENSMUSP00000114059; ENSMUSG00000034211
GeneIDi66258
KEGGimmu:66258
UCSCiuc008ztb.1 mouse

Organism-specific databases

CTDi51373
MGIiMGI:1913508 Mrps17

Phylogenomic databases

eggNOGiKOG3447 Eukaryota
ENOG4111N11 LUCA
GeneTreeiENSGT00530000064130
HOGENOMiHOG000126812
HOVERGENiHBG002498
InParanoidiQ9CQE3
KOiK02961
OMAiHAKWIIG
OrthoDBiEOG091G0QS6
PhylomeDBiQ9CQE3
TreeFamiTF326484

Enzyme and pathway databases

ReactomeiR-MMU-5389840 Mitochondrial translation elongation
R-MMU-5419276 Mitochondrial translation termination

Miscellaneous databases

PROiPR:Q9CQE3
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000034211 Expressed in 299 organ(s), highest expression level in liver
CleanExiMM_MRPS17
ExpressionAtlasiQ9CQE3 baseline and differential
GenevisibleiQ9CQE3 MM

Family and domain databases

InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR000266 Ribosomal_S17/S11
IPR039193 S17mt
PANTHERiPTHR24088 PTHR24088, 1 hit
PfamiView protein in Pfam
PF00366 Ribosomal_S17, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD001295 Ribosomal_S17, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRT17_MOUSE
AccessioniPrimary (citable) accession number: Q9CQE3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: April 27, 2001
Last modified: September 12, 2018
This is version 126 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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