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Entry version 84 (31 Jul 2019)
Sequence version 1 (01 Jun 2001)
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Protein
Submitted name:

Uncharacterized protein T5M16.19

Gene

T5M16.19

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized protein T5M16.19Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:T5M16.19Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q9CAP7 baseline and differential

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1192 – 1211DisorderedSequence analysisAdd BLAST20
Regioni1226 – 1271DisorderedSequence analysisAdd BLAST46

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1226 – 1241PolarSequence analysisAdd BLAST16
Compositional biasi1252 – 1271PolarSequence analysisAdd BLAST20

Phylogenomic databases

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q9CAP7

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.25.10.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR039776 Pds5

The PANTHER Classification System

More...
PANTHERi
PTHR12663 PTHR12663, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48371 SSF48371, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q9CAP7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
METENDHYGL ESSGVATKCE VANTLSKIDQ PSATNKEKGL KLIEAELRPL
60 70 80 90 100
KKSIIKHALL KNRDNDVSLL VTVCVSELFR ILAPHLPFED EYLRDIFTLF
110 120 130 140 150
IAEFSELSDT VSPYFSKRAK ILETVSRLKF CLLMLDEDCQ DLVHEMFNMF
160 170 180 190 200
FSLVREHHQQ SLINQKSMKT QQRKANTQQT QHSLFNNILA IMSDVLEEEA
210 220 230 240 250
NSSFVVVILE NLVKEGEDTT SGADKLASSL IERCADRLEP LICSFLTSCF
260 270 280 290 300
MEKDSIQTNL KDSYHEIIFK ISLIAPQMLL AVIPKLTQEL LTDQVDVRIK
310 320 330 340 350
ALNLAGRIFA QPKHCLSSYV ETYQDLYAEF LRRFSDKSAE VRMAALKCGK
360 370 380 390 400
QCYFANPSGN KASGVLTAIQ ERLLDFDDRV RTQALIVACD IMKFNMKYVP
410 420 430 440 450
LNLISEASER LRDKKISVRK KALQKLTEVY QDYCDKCSEG DMTITDNFEQ
460 470 480 490 500
IPCKILLLCC EKNCEEFRSQ NLELVLSDDL FPRLLPVEER MRHWVQCFAI
510 520 530 540 550
MNHIHLKSLN SILSQKRRLQ NELRHCLTLW RKAKVDNIEE AQRKKKSYFV
560 570 580 590 600
KLSACFPDAS EAEDLFEKLD RMRDASIFDV LTLLLEELSS TNAQIIKEKF
610 620 630 640 650
LKMIGVKHSL FEFLRILSTK CSPSIFSSEH VQCLLNQLCG STSANTQLKA
660 670 680 690 700
PSIKLLLVIL NMFPSYLRGS EKQFLKLLEE NDSAADELIV VLSKAAPYIS
710 720 730 740 750
VNFGDYYPVL EKVCLEGTRS QTKCAVSAIS SLAGSSEKSV FSELCEMLMD
760 770 780 790 800
SLLCGRNIPT TLQSLACVGQ YSVLEYDNIY EDITSYIYRV FQIYGLKTLV
810 820 830 840 850
KSFLPRHGQV VRKIDDLLNI LKKTLKSQGH DGIKSWCLFV LEICSEDTGA
860 870 880 890 900
NVRLAAAKAV LLLSRKWDLH ISPEVFRLTI LMAKSFRYIN GFINKATRES
910 920 930 940 950
RTCRDLDQGE SLTDSPVYMT VFLIHVLAHD PEFPSEDCRD EHIYARFCGP
960 970 980 990 1000
LFSVLQVLLS INNNGFTIKE TAPFLFCIFR AIKRAEDAVD SRKTPNKAKS
1010 1020 1030 1040 1050
RTRNALEQSF IERIVHIFQS QISMHDQRCQ KDSLAVGSED KVLPPLLGNQ
1060 1070 1080 1090 1100
IETSITGSTE ASQNNTRCSR KRTHLGEHIS CNSLSLRTVE SEIPIKKLER
1110 1120 1130 1140 1150
HTTCAKESVK ASVSNKITSS KHSGVVSALK DISNHGEAII GQRIKLLSPT
1160 1170 1180 1190 1200
DGCFYPGTVE KFNSKSNSHK IIFDNGDVEL VCLDSESWET LSHESMGQQE
1210 1220 1230 1240 1250
RLGKETESYG SRNCVPEISH TLAKVTAQKQ TTTTKQQNKK VPAKLNPPAA
1260 1270 1280 1290 1300
KSKKGNSDSG EGSVSEVTDT SDNIKSECRL IKKSIAQFSG TKKKSETENF

VGT
Length:1,303
Mass (Da):147,204
Last modified:June 1, 2001 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iE9FCD823F9006AC3
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AC010704 Genomic DNA Translation: AAG51671.1

Protein sequence database of the Protein Information Resource

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PIRi
E96805

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC010704 Genomic DNA Translation: AAG51671.1
PIRiE96805

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Phylogenomic databases

PhylomeDBiQ9CAP7

Gene expression databases

ExpressionAtlasiQ9CAP7 baseline and differential

Family and domain databases

Gene3Di1.25.10.10, 1 hit
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR039776 Pds5
PANTHERiPTHR12663 PTHR12663, 1 hit
SUPFAMiSSF48371 SSF48371, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ9CAP7_ARATH
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9CAP7
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: July 31, 2019
This is version 84 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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