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Entry version 117 (18 Sep 2019)
Sequence version 3 (16 Nov 2011)
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Protein

Uncharacterized protein At3g06530

Gene

At3g06530

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in ribosome biosynthesis (By similarity).By similarity

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionRibonucleoprotein
Biological processRibosome biogenesis, rRNA processing

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Uncharacterized protein At3g06530
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:At3g06530
ORF Names:F5E6.14
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 3

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT3G06530

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section indicates that the initiator methionine is cleaved from the mature protein.<p><a href='/help/init_met' target='_top'>More...</a></p>Initiator methionineiRemovedCombined sources
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00001862052 – 2197Uncharacterized protein At3g06530Add BLAST2196

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei2N-acetylserineCombined sources1

Keywords - PTMi

Acetylation

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9C8Z4

PRoteomics IDEntifications database

More...
PRIDEi
Q9C8Z4

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q9C8Z4

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q9C8Z4 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q9C8Z4 AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
5166, 12 interactors

Protein interaction database and analysis system

More...
IntActi
Q9C8Z4, 1 interactor

STRING: functional protein association networks

More...
STRINGi
3702.AT3G06530.2

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati2159 – 2195HEATAdd BLAST37

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the HEATR1/UTP10 family.Curated

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1837 Eukaryota
ENOG410XNQQ LUCA

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q9C8Z4

KEGG Orthology (KO)

More...
KOi
K14550

Database of Orthologous Groups

More...
OrthoDBi
524830at2759

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR016024 ARM-type_fold
IPR012954 BP28_C_dom
IPR022125 U3snoRNP10_N
IPR040191 UTP10

The PANTHER Classification System

More...
PANTHERi
PTHR13457 PTHR13457, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF08146 BP28CT, 1 hit
PF12397 U3snoRNP10, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01036 BP28CT, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48371 SSF48371, 3 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 1 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoform i produced by alternative splicing. AlignAdd to basket
Note: A number of isoforms are produced. According to EST sequences.

This entry has 1 described isoform and 4 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q9C8Z4-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MSSSIVSQLQ ALKSVLQADT EPSKRPFTRP SILFSPKEAA DFDIESIYEL
60 70 80 90 100
GLKGLEVLGN KDERFKNYMN DLFSHKSKEI DRELLGKEEN ARIDSSISSY
110 120 130 140 150
LRLLSGYLQF RASLETLEYL IRRYKIHIYN LEDVVLCALP YHDTHAFVRI
160 170 180 190 200
VQLLSTGNSK WKFLDGVKNS GAPPPRSVIV QQCIRDKQVL EALCDYASRT
210 220 230 240 250
KKYQPSKPVV SFSTAVVVGV LGSVPTVDGD IVKTILPFVD SGLQSGVKGC
260 270 280 290 300
LDQQAGALMV VGMLANRAVL NTNLIKRLMR SIIDIGREHA KESSDPHSLR
310 320 330 340 350
LSLMALINFV QLQSVDLIPR KALDLFNEIR DISGVLLGLS KEFNIKRFLA
360 370 380 390 400
VLLDSLLFYS SSDDKCCEVL ASIIETVPVS NLVDHLISKV FSLCMTQYQK
410 420 430 440 450
NSDFRSSTSG SWAKKFLVVV SKKYPAELRA AVPKFLEATE VQSKKEDLKL
460 470 480 490 500
EMLSCMLDGN SDMSHPFVDS KLWFRLHHPR AAVRCAALSS LNGVLKDDSS
510 520 530 540 550
KAENLVTIQD AILRQLWDDD LAVVQAALSF DKLPNIITSS GLLDALLHVV
560 570 580 590 600
KRCVGILVSG VSHNVQLAVD VVALSLKIAV SSFGNQTDST EKVTSAMFPF
610 620 630 640 650
LLIQPKTWNL NLLVLKLGKD VNWPLFKNLA ADDGMKKLPD IMSTNLSSIS
660 670 680 690 700
MDIINDLGEA LSLDPDERRI ELIERACNYK LSEVLETCSN IKCSEQDRNK
710 720 730 740 750
LQKGLLIRES VSALNIDVIN KLVEAFMMHP ADYIQWLTVS CRDSTLSKTL
760 770 780 790 800
FYMILMHSLQ KMNSSSDPSQ LLDLFELCFP VLKTEWEELE VEVDVSLKEL
810 820 830 840 850
SKSNCQELLY QLLDTSDFTA LNSKVLICLF WKLGESFIKL EPAHDASVLN
860 870 880 890 900
KRLSSGLEDL FFFFATTRLR HVFKEHLHFR VREAKVCPVL FLSRLISRED
910 920 930 940 950
VPPLVQIESL RCFSYLCSSG NNEWLIQVFS SFPVLLVPMS SDNQDVKAAA
960 970 980 990 1000
INCIEALFNL RAAIYGSSFD ELLGMIVQQR RLILSDNKFF ASYLTSLLSS
1010 1020 1030 1040 1050
TTNDLLVPVG LQKRFDQSTK ENILSVILLC AEDLPAYGKL RVLSLLKDLG
1060 1070 1080 1090 1100
IMLMRDEIVK LLSQLLDKRS QYYYKLDKTS QPLSDTEVDL LCLLLECSMM
1110 1120 1130 1140 1150
RTSSFKGQSL DDHILSALNV DCMASERPAV ISPCLTILEK LSNRFYDELQ
1160 1170 1180 1190 1200
TDVQIRFFHK LVSMFRSSNG SIQNGAKEAV LRLKLSSSTV VLALDRITQQ
1210 1220 1230 1240 1250
DTLVIGSLSK KKKQKKNSKS CPEEDINSEE FRSGEKALSF IASLLDMLLL
1260 1270 1280 1290 1300
KKDLTHRESL IRPLFKLLQR SMSKEWVKIA FSIEETSLQP PQDVRETTPT
1310 1320 1330 1340 1350
FISSIQQTLL LILKDIFDSL NMNPLKAEVA NEINVKMLVE LAHSSNDGVT
1360 1370 1380 1390 1400
RNHIFSLFTA IVKFVPDKVL DHIISILTLV GESTVTQIDS HSKSIFEGFI
1410 1420 1430 1440 1450
SMVIPFWLSK TKSEEQLLQI FVKVLPDIVE HRRRSIVAYL LGVIGERNGL
1460 1470 1480 1490 1500
PALLVLLFKS LISRKDSAWL GNANVSESFA SIVKKEWEYS FAMEICEQYS
1510 1520 1530 1540 1550
SSTWLSSLVI LLQTISKDSK QCFLQMRLVL EFVFQKLQDP EFAFAVSLEP
1560 1570 1580 1590 1600
RNNVSVGIQQ ELQELMKCCI CLLQAIDAKK EKDVTSSVRN EIRMRIHDVL
1610 1620 1630 1640 1650
MTVTGAMDLS IYFRVVTSLL QQQTDYNGTK KVLGLISERA KDTSSSKMKH
1660 1670 1680 1690 1700
KRKISNQKGR NSWLNLDEVA VDSFGKMCEE IVHLINATDD ESGVPVKRAA
1710 1720 1730 1740 1750
ISTLEVLAGR FPSGHPIFRK CLAAVAECIS SKNLGVSSSC LRTTGALINV
1760 1770 1780 1790 1800
LGPKALIELP CIMKNLVKQS LEVSFASQSG RNATAEEQLL MLSVLVTLEA
1810 1820 1830 1840 1850
VIDKLGGFLN PHLGDIMKIM VLHPEYVSDF DKNLKSKANA IRRLLTDKIP
1860 1870 1880 1890 1900
VRLTLQPLLR IYNEAVSSGN ASLVIAFNML EDLVVKMDRS SIVSSHGKIF
1910 1920 1930 1940 1950
DQCLVALDIR RLNPAAIQNI DDAERSVTSA MVALTKKLTE SEFRPLFIRS
1960 1970 1980 1990 2000
IDWAESDVVD GSGSENKSID RAISFYGLVD RLCESHRSIF VPYFKYVLDG
2010 2020 2030 2040 2050
IVAHLTTAEA SVSTRKKKKA KIQQTSDSIQ PKSWHLRALV LSCLKNCFLH
2060 2070 2080 2090 2100
DTGSLKFLDT NNFQVLLKPI VSQLVVEPPS SLKEHPHVPS VDEVDDLLVS
2110 2120 2130 2140 2150
CIGQMAVASG SDLLWKPLNH EVLMQTRSES VRSRMLSLRS VKQMLDNLKE
2160 2170 2180 2190
EYLVLLAETI PFLAELLEDV ELSVKSLAQD IIKQMEEMSG ESLAEYL
Length:2,197
Mass (Da):246,322
Last modified:November 16, 2011 - v3
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iE7BFBEFAB126A382
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F4JAY0F4JAY0_ARATH
ARM repeat superfamily protein
At3g06530, F5E6.14, F5E6_14
2,199Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F4JAY1F4JAY1_ARATH
ARM repeat superfamily protein
At3g06530, F5E6.14, F5E6_14
2,188Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A1I9LP28A0A1I9LP28_ARATH
ARM repeat superfamily protein
At3g06530, F5E6.14, F5E6_14
2,210Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A1I9LP29A0A1I9LP29_ARATH
ARM repeat superfamily protein
At3g06530, F5E6.14, F5E6_14
2,208Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAG51331 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AC020580 Genomic DNA Translation: AAG51331.1 Sequence problems.
CP002686 Genomic DNA Translation: AEE74407.1
AK221804 mRNA Translation: BAD93973.1

NCBI Reference Sequences

More...
RefSeqi
NP_187305.5, NM_111529.6 [Q9C8Z4-1]

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT3G06530.1; AT3G06530.1; AT3G06530 [Q9C8Z4-1]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
819831

Gramene; a comparative resource for plants

More...
Gramenei
AT3G06530.1; AT3G06530.1; AT3G06530 [Q9C8Z4-1]

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT3G06530

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC020580 Genomic DNA Translation: AAG51331.1 Sequence problems.
CP002686 Genomic DNA Translation: AEE74407.1
AK221804 mRNA Translation: BAD93973.1
RefSeqiNP_187305.5, NM_111529.6 [Q9C8Z4-1]

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

BioGridi5166, 12 interactors
IntActiQ9C8Z4, 1 interactor
STRINGi3702.AT3G06530.2

PTM databases

iPTMnetiQ9C8Z4

Proteomic databases

PaxDbiQ9C8Z4
PRIDEiQ9C8Z4

Genome annotation databases

EnsemblPlantsiAT3G06530.1; AT3G06530.1; AT3G06530 [Q9C8Z4-1]
GeneIDi819831
GrameneiAT3G06530.1; AT3G06530.1; AT3G06530 [Q9C8Z4-1]
KEGGiath:AT3G06530

Organism-specific databases

AraportiAT3G06530

Phylogenomic databases

eggNOGiKOG1837 Eukaryota
ENOG410XNQQ LUCA
InParanoidiQ9C8Z4
KOiK14550
OrthoDBi524830at2759

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q9C8Z4

Gene expression databases

ExpressionAtlasiQ9C8Z4 baseline and differential
GenevisibleiQ9C8Z4 AT

Family and domain databases

InterProiView protein in InterPro
IPR016024 ARM-type_fold
IPR012954 BP28_C_dom
IPR022125 U3snoRNP10_N
IPR040191 UTP10
PANTHERiPTHR13457 PTHR13457, 1 hit
PfamiView protein in Pfam
PF08146 BP28CT, 1 hit
PF12397 U3snoRNP10, 1 hit
SMARTiView protein in SMART
SM01036 BP28CT, 1 hit
SUPFAMiSSF48371 SSF48371, 3 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiHEAT1_ARATH
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9C8Z4
Secondary accession number(s): F4JAY2, Q56X73
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 1, 2001
Last sequence update: November 16, 2011
Last modified: September 18, 2019
This is version 117 of the entry and version 3 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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