UniProtKB - Q9C7V5 (PP104_ARATH)
Protein
Putative pentatricopeptide repeat-containing protein At1g64310
Gene
PCMP-E65
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Names & Taxonomyi
Protein namesi | Recommended name: Putative pentatricopeptide repeat-containing protein At1g64310 |
Gene namesi | Name:PCMP-E65 Ordered Locus Names:At1g64310 ORF Names:F15H21.19 |
Organismi | Arabidopsis thaliana (Mouse-ear cress) |
Taxonomic identifieri | 3702 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › eudicotyledons › Gunneridae › Pentapetalae › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis |
Proteomesi |
|
Organism-specific databases
Araporti | AT1G64310 |
TAIRi | locus:2014270, AT1G64310 |
Subcellular locationi
Chloroplast
- chloroplast Source: GOC
Mitochondrion
- mitochondrion Source: GOC
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000342845 | 1 – 552 | Putative pentatricopeptide repeat-containing protein At1g64310Add BLAST | 552 |
Proteomic databases
PaxDbi | Q9C7V5 |
PRIDEi | Q9C7V5 |
ProteomicsDBi | 249058 |
PTM databases
iPTMneti | Q9C7V5 |
Expressioni
Gene expression databases
ExpressionAtlasi | Q9C7V5, baseline and differential |
Genevisiblei | Q9C7V5, AT |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Repeati | 39 – 69 | PPR 1Add BLAST | 31 | |
Repeati | 70 – 104 | PPR 2Add BLAST | 35 | |
Repeati | 105 – 139 | PPR 3Add BLAST | 35 | |
Repeati | 140 – 170 | PPR 4Add BLAST | 31 | |
Repeati | 171 – 205 | PPR 5Add BLAST | 35 | |
Repeati | 206 – 240 | PPR 6Add BLAST | 35 | |
Repeati | 241 – 271 | PPR 7Add BLAST | 31 | |
Repeati | 272 – 306 | PPR 8Add BLAST | 35 | |
Repeati | 307 – 341 | PPR 9Add BLAST | 35 | |
Repeati | 342 – 372 | PPR 10Add BLAST | 31 | |
Repeati | 373 – 407 | PPR 11Add BLAST | 35 | |
Repeati | 408 – 438 | PPR 12Add BLAST | 31 | |
Repeati | 444 – 474 | PPR 13Add BLAST | 31 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 479 – 552 | Type E motif; degenerateAdd BLAST | 74 |
Sequence similaritiesi
Keywords - Domaini
RepeatPhylogenomic databases
eggNOGi | KOG4197, Eukaryota |
HOGENOMi | CLU_002706_37_2_1 |
InParanoidi | Q9C7V5 |
OMAi | TEHYVYI |
OrthoDBi | 1344243at2759 |
PhylomeDBi | Q9C7V5 |
Family and domain databases
Gene3Di | 1.25.40.10, 5 hits |
InterProi | View protein in InterPro IPR002885, Pentatricopeptide_repeat IPR011990, TPR-like_helical_dom_sf |
Pfami | View protein in Pfam PF01535, PPR, 7 hits |
TIGRFAMsi | TIGR00756, PPR, 4 hits |
PROSITEi | View protein in PROSITE PS51375, PPR, 10 hits |
i Sequence
Sequence statusi: Complete.
Q9C7V5-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MASQTQLRLI IYEFTRKIQT RLNTQKLHSF VTKSKLARDP YFATQLARFY
60 70 80 90 100
ALNDDLISAR KLFDVFPERS VFLWNSIIRA YAKAHQFTTV LSLFSQILRS
110 120 130 140 150
DTRPDNFTYA CLARGFSESF DTKGLRCIHG IAIVSGLGFD QICGSAIVKA
160 170 180 190 200
YSKAGLIVEA SKLFCSIPDP DLALWNVMIL GYGCCGFWDK GINLFNLMQH
210 220 230 240 250
RGHQPNCYTM VALTSGLIDP SLLLVAWSVH AFCLKINLDS HSYVGCALVN
260 270 280 290 300
MYSRCMCIAS ACSVFNSISE PDLVACSSLI TGYSRCGNHK EALHLFAELR
310 320 330 340 350
MSGKKPDCVL VAIVLGSCAE LSDSVSGKEV HSYVIRLGLE LDIKVCSALI
360 370 380 390 400
DMYSKCGLLK CAMSLFAGIP EKNIVSFNSL ILGLGLHGFA STAFEKFTEI
410 420 430 440 450
LEMGLIPDEI TFSALLCTCC HSGLLNKGQE IFERMKSEFG IEPQTEHYVY
460 470 480 490 500
MVKLMGMAGK LEEAFEFVMS LQKPIDSGIL GALLSCCEVH ENTHLAEVVA
510 520 530 540 550
ENIHKNGEER RSVYKVMLSN VYARYGRWDE VERLRDGISE SYGGKLPGIS
WF
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC066689 Genomic DNA Translation: AAG51720.1 CP002684 Genomic DNA Translation: AEE34225.1 |
PIRi | A96667 |
RefSeqi | NP_176613.1, NM_105105.1 |
Genome annotation databases
EnsemblPlantsi | AT1G64310.1; AT1G64310.1; AT1G64310 |
GeneIDi | 842737 |
Gramenei | AT1G64310.1; AT1G64310.1; AT1G64310 |
KEGGi | ath:AT1G64310 |
Similar proteinsi
Cross-referencesi
Web resourcesi
Pentatricopeptide repeat proteins |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC066689 Genomic DNA Translation: AAG51720.1 CP002684 Genomic DNA Translation: AEE34225.1 |
PIRi | A96667 |
RefSeqi | NP_176613.1, NM_105105.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
PTM databases
iPTMneti | Q9C7V5 |
Proteomic databases
PaxDbi | Q9C7V5 |
PRIDEi | Q9C7V5 |
ProteomicsDBi | 249058 |
Genome annotation databases
EnsemblPlantsi | AT1G64310.1; AT1G64310.1; AT1G64310 |
GeneIDi | 842737 |
Gramenei | AT1G64310.1; AT1G64310.1; AT1G64310 |
KEGGi | ath:AT1G64310 |
Organism-specific databases
Araporti | AT1G64310 |
TAIRi | locus:2014270, AT1G64310 |
Phylogenomic databases
eggNOGi | KOG4197, Eukaryota |
HOGENOMi | CLU_002706_37_2_1 |
InParanoidi | Q9C7V5 |
OMAi | TEHYVYI |
OrthoDBi | 1344243at2759 |
PhylomeDBi | Q9C7V5 |
Miscellaneous databases
PROi | PR:Q9C7V5 |
Gene expression databases
ExpressionAtlasi | Q9C7V5, baseline and differential |
Genevisiblei | Q9C7V5, AT |
Family and domain databases
Gene3Di | 1.25.40.10, 5 hits |
InterProi | View protein in InterPro IPR002885, Pentatricopeptide_repeat IPR011990, TPR-like_helical_dom_sf |
Pfami | View protein in Pfam PF01535, PPR, 7 hits |
TIGRFAMsi | TIGR00756, PPR, 4 hits |
PROSITEi | View protein in PROSITE PS51375, PPR, 10 hits |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | PP104_ARATH | |
Accessioni | Q9C7V5Primary (citable) accession number: Q9C7V5 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | July 1, 2008 |
Last sequence update: | June 1, 2001 | |
Last modified: | December 2, 2020 | |
This is version 103 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Plant Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Arabidopsis thaliana
Arabidopsis thaliana: entries and gene names - SIMILARITY comments
Index of protein domains and families