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Protein

Transcription factor bHLH96

Gene

BHLH96

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • DNA binding Source: UniProtKB-KW
  • DNA-binding transcription factor activity Source: TAIR
  • protein dimerization activity Source: InterPro

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Transcription factor bHLH96
Alternative name(s):
Basic helix-loop-helix protein 96
Short name:
AtbHLH96
Short name:
bHLH 96
Transcription factor EN 15
bHLH transcription factor bHLH096
Gene namesi
Name:BHLH96
Synonyms:EN15
Ordered Locus Names:At1g72210
ORF Names:T9N14.4
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G72210
TAIRilocus:2207061 AT1G72210

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003587871 – 320Transcription factor bHLH96Add BLAST320

Proteomic databases

PaxDbiQ9C7T4

Expressioni

Tissue specificityi

Expressed constitutively in roots, leaves, stems, and flowers.1 Publication

Gene expression databases

ExpressionAtlasiQ9C7T4 baseline and differential

Interactioni

Subunit structurei

Homodimer.Curated

Binary interactionsi

GO - Molecular functioni

Protein-protein interaction databases

BioGridi28773, 3 interactors
IntActiQ9C7T4, 56 interactors
STRINGi3702.AT1G72210.1

Structurei

3D structure databases

ProteinModelPortaliQ9C7T4
SMRiQ9C7T4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini122 – 173bHLHPROSITE-ProRule annotationAdd BLAST52
Domaini244 – 320ACTPROSITE-ProRule annotationAdd BLAST77

Phylogenomic databases

eggNOGiENOG410IWF3 Eukaryota
ENOG410YF8H LUCA
HOGENOMiHOG000238962
InParanoidiQ9C7T4
OMAiMPPSYAH
OrthoDBiEOG09360LG6
PhylomeDBiQ9C7T4

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR002912 ACT_dom
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
PfamiView protein in Pfam
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS51671 ACT, 1 hit
PS50888 BHLH, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q9C7T4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MALEAVVYPQ DPFSYISCKD FPFYDLYFQE EEDQDPQDTK NNIKLGQGQG
60 70 80 90 100
HGFASNNYNG RTGDYSDDYN YNEEDLQWPR DLPYGSAVDT ESQPPPSDVA
110 120 130 140 150
AGGGRRKRRR TRSSKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP
160 170 180 190 200
PYYAQRGDQA SIVGGAINYL KELEHHLQSM EPPVKTATED TGAGHDQTKT
210 220 230 240 250
TSASSSGPFS DFFAFPQYSN RPTSAAAAEG MAEIEVTMVE SHASLKILAK
260 270 280 290 300
KRPRQLLKLV SSIQSLRLTL LHLNVTTRDD SVLYSISVKV EEGSQLNTVE
310 320
DIAAAVNQIL RRIEEESSFS
Length:320
Mass (Da):35,972
Last modified:June 1, 2001 - v1
Checksum:iFCF1F34C1B18D3FB
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1P8ANA4A0A1P8ANA4_ARATH
Basic helix-loop-helix (BHLH) DNA-b...
bHLH096 bHLH96, At1g72210, T9N14.4, T9N14_4
309Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ459771 mRNA Translation: CAD30833.1
AC067754 Genomic DNA Translation: AAG51804.1
CP002684 Genomic DNA Translation: AEE35289.1
BT003871 mRNA Translation: AAO41920.1
BT006086 mRNA Translation: AAP04071.1
PIRiF96745
RefSeqiNP_177366.1, NM_105880.4
UniGeneiAt.35130

Genome annotation databases

EnsemblPlantsiAT1G72210.1; AT1G72210.1; AT1G72210
GeneIDi843553
GrameneiAT1G72210.1; AT1G72210.1; AT1G72210
KEGGiath:AT1G72210

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ459771 mRNA Translation: CAD30833.1
AC067754 Genomic DNA Translation: AAG51804.1
CP002684 Genomic DNA Translation: AEE35289.1
BT003871 mRNA Translation: AAO41920.1
BT006086 mRNA Translation: AAP04071.1
PIRiF96745
RefSeqiNP_177366.1, NM_105880.4
UniGeneiAt.35130

3D structure databases

ProteinModelPortaliQ9C7T4
SMRiQ9C7T4
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi28773, 3 interactors
IntActiQ9C7T4, 56 interactors
STRINGi3702.AT1G72210.1

Proteomic databases

PaxDbiQ9C7T4

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G72210.1; AT1G72210.1; AT1G72210
GeneIDi843553
GrameneiAT1G72210.1; AT1G72210.1; AT1G72210
KEGGiath:AT1G72210

Organism-specific databases

AraportiAT1G72210
TAIRilocus:2207061 AT1G72210

Phylogenomic databases

eggNOGiENOG410IWF3 Eukaryota
ENOG410YF8H LUCA
HOGENOMiHOG000238962
InParanoidiQ9C7T4
OMAiMPPSYAH
OrthoDBiEOG09360LG6
PhylomeDBiQ9C7T4

Miscellaneous databases

PROiPR:Q9C7T4

Gene expression databases

ExpressionAtlasiQ9C7T4 baseline and differential

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR002912 ACT_dom
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
PfamiView protein in Pfam
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS51671 ACT, 1 hit
PS50888 BHLH, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiBH096_ARATH
AccessioniPrimary (citable) accession number: Q9C7T4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 16, 2008
Last sequence update: June 1, 2001
Last modified: October 10, 2018
This is version 110 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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