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UniProtKB - Q9C0Z1 (YKM1_SCHPO)
Protein
Uncharacterized transcriptional regulatory protein PB24D3.01
Gene
SPAPB24D3.01
Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Functioni
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
DNA bindingi | 11 – 38 | Zn(2)-C6 fungal-typePROSITE-ProRule annotationAdd BLAST | 28 |
GO - Molecular functioni
- DNA-binding transcription factor activity, RNA polymerase II-specific Source: PomBase
- RNA polymerase II cis-regulatory region sequence-specific DNA binding Source: PomBase
- zinc ion binding Source: PomBase
GO - Biological processi
- regulation of transcription by RNA polymerase II Source: PomBase
- transcription, DNA-templated Source: InterPro
Keywordsi
Molecular function | DNA-binding |
Biological process | Transcription, Transcription regulation |
Ligand | Metal-binding, Zinc |
Names & Taxonomyi
Protein namesi | Recommended name: Uncharacterized transcriptional regulatory protein PB24D3.01 |
Gene namesi | ORF Names:SPAPB24D3.01, SPAPB2C8.02 |
Organismi | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) |
Taxonomic identifieri | 284812 [NCBI] |
Taxonomic lineagei | Eukaryota › Fungi › Dikarya › Ascomycota › Taphrinomycotina › Schizosaccharomycetes › Schizosaccharomycetales › Schizosaccharomycetaceae › Schizosaccharomyces › |
Proteomesi |
|
Organism-specific databases
PomBasei | SPAPB24D3.01 |
VEuPathDBi | FungiDB:SPAPB24D3.01 |
Subcellular locationi
Nucleus
- Nucleus PROSITE-ProRule annotation1 Publication
Other locations
- Membrane Curated; Single-pass membrane protein Curated
Nucleus
- nucleus Source: PomBase
Other locations
- chromatin Source: PomBase
- integral component of membrane Source: UniProtKB-KW
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 503 – 523 | HelicalSequence analysisAdd BLAST | 21 |
Keywords - Cellular componenti
Membrane, NucleusPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000115012 | 1 – 594 | Uncharacterized transcriptional regulatory protein PB24D3.01Add BLAST | 594 |
Proteomic databases
MaxQBi | Q9C0Z1 |
PaxDbi | Q9C0Z1 |
PTM databases
iPTMneti | Q9C0Z1 |
Interactioni
Protein-protein interaction databases
BioGRIDi | 280558, 1 interactor |
STRINGi | 4896.SPAPB24D3.01.1 |
Family & Domainsi
Keywords - Domaini
Transmembrane, Transmembrane helixPhylogenomic databases
eggNOGi | ENOG502S2DS, Eukaryota |
HOGENOMi | CLU_458675_0_0_1 |
InParanoidi | Q9C0Z1 |
PhylomeDBi | Q9C0Z1 |
Family and domain databases
CDDi | cd00067, GAL4, 1 hit |
Gene3Di | 4.10.240.10, 1 hit |
InterProi | View protein in InterPro IPR007219, Transcription_factor_dom_fun IPR001138, Zn2-C6_fun-type_DNA-bd IPR036864, Zn2-C6_fun-type_DNA-bd_sf |
Pfami | View protein in Pfam PF04082, Fungal_trans, 1 hit PF00172, Zn_clus, 1 hit |
SMARTi | View protein in SMART SM00906, Fungal_trans, 1 hit SM00066, GAL4, 1 hit |
SUPFAMi | SSF57701, SSF57701, 1 hit |
PROSITEi | View protein in PROSITE PS00463, ZN2_CY6_FUNGAL_1, 1 hit PS50048, ZN2_CY6_FUNGAL_2, 1 hit |
i Sequence
Sequence statusi: Complete.
Q9C0Z1-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MTSVEKASKA CELCRRKKIR CNRELPSCQN CIVYQEECHY SKRLKRSYSA
60 70 80 90 100
TKKKNGNPVL ESAIPSLSPS PSIENGSAML NSDITSLSNR IFKVEEKLDL
110 120 130 140 150
ILSLLKNSSE PLDRTERKDF PSLAMQIRDA NSLVNTKLKE YSRRFELPSQ
160 170 180 190 200
KTSFDDLFSS TFPNFDAAFK DIPDKEWAFE NVQWYFRYIN CWWPVFYEKD
210 220 230 240 250
FMDEYECLYR DRNQVKGAWL VSFYSVLALA ASRSKAGKDQ KLAESFFSTS
260 270 280 290 300
WYLIQKPGFF LTPQLEKIQA LLIMIQFAAH VSLHTLCKAL CGQACLMIRD
310 320 330 340 350
LNLHRESANA DFSNKDAELR RRVFWICYIF EITTSLVFGT PSVLSDMDID
360 370 380 390 400
CEHPNYEYGR YFSEMPTGDL IFSSEVSLTI LKNEVRTKVY SRTNTSNARN
410 420 430 440 450
REKAIWQIHE KLLCWERALP IELRQYFIAL TENAQIYEEL DFEKQRLFSA
460 470 480 490 500
CIEVYLSYCN TLIFLHRLNE SVEGANICLD TARRAINVLK FFFIIPIAKN
510 520 530 540 550
VCYLWVFLYC PFTPFLVLFS NIVNGKEPST DIAFEDLNRM YSVNRFFVKL
560 570 580 590
RDIGGDLAEK LASVTENFIH AAENYFAVQP AFMADAFDFA SFLT
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CU329670 Genomic DNA Translation: CAC36909.2 |
RefSeqi | XP_001713074.1, XM_001713022.2 |
Genome annotation databases
EnsemblFungii | SPAPB24D3.01.1; SPAPB24D3.01.1:pep; SPAPB24D3.01 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CU329670 Genomic DNA Translation: CAC36909.2 |
RefSeqi | XP_001713074.1, XM_001713022.2 |
3D structure databases
SMRi | Q9C0Z1 |
ModBasei | Search... |
Protein-protein interaction databases
BioGRIDi | 280558, 1 interactor |
STRINGi | 4896.SPAPB24D3.01.1 |
PTM databases
iPTMneti | Q9C0Z1 |
Proteomic databases
MaxQBi | Q9C0Z1 |
PaxDbi | Q9C0Z1 |
Genome annotation databases
EnsemblFungii | SPAPB24D3.01.1; SPAPB24D3.01.1:pep; SPAPB24D3.01 |
Organism-specific databases
PomBasei | SPAPB24D3.01 |
VEuPathDBi | FungiDB:SPAPB24D3.01 |
Phylogenomic databases
eggNOGi | ENOG502S2DS, Eukaryota |
HOGENOMi | CLU_458675_0_0_1 |
InParanoidi | Q9C0Z1 |
PhylomeDBi | Q9C0Z1 |
Miscellaneous databases
PROi | PR:Q9C0Z1 |
Family and domain databases
CDDi | cd00067, GAL4, 1 hit |
Gene3Di | 4.10.240.10, 1 hit |
InterProi | View protein in InterPro IPR007219, Transcription_factor_dom_fun IPR001138, Zn2-C6_fun-type_DNA-bd IPR036864, Zn2-C6_fun-type_DNA-bd_sf |
Pfami | View protein in Pfam PF04082, Fungal_trans, 1 hit PF00172, Zn_clus, 1 hit |
SMARTi | View protein in SMART SM00906, Fungal_trans, 1 hit SM00066, GAL4, 1 hit |
SUPFAMi | SSF57701, SSF57701, 1 hit |
PROSITEi | View protein in PROSITE PS00463, ZN2_CY6_FUNGAL_1, 1 hit PS50048, ZN2_CY6_FUNGAL_2, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | YKM1_SCHPO | |
Accessioni | Q9C0Z1Primary (citable) accession number: Q9C0Z1 Secondary accession number(s): Q9C0Y1 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | May 16, 2003 |
Last sequence update: | May 16, 2003 | |
Last modified: | April 7, 2021 | |
This is version 116 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Fungal Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Schizosaccharomyces pombe
Schizosaccharomyces pombe: entries and gene names