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Protein

Uncharacterized protein C1orf50

Gene

C1orf50

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • identical protein binding Source: IntAct

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C1orf50
Gene namesi
Name:C1orf50
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 1

Organism-specific databases

EuPathDBiHostDB:ENSG00000164008.13
HGNCiHGNC:28795 C1orf50
neXtProtiNX_Q9BV19

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA134861089

Polymorphism and mutation databases

BioMutaiC1orf50
DMDMi223590163

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002511891 – 199Uncharacterized protein C1orf50Add BLAST199

Proteomic databases

EPDiQ9BV19
MaxQBiQ9BV19
PaxDbiQ9BV19
PeptideAtlasiQ9BV19
PRIDEiQ9BV19
ProteomicsDBi79151

PTM databases

iPTMnetiQ9BV19
PhosphoSitePlusiQ9BV19

Expressioni

Gene expression databases

BgeeiENSG00000164008 Expressed in 216 organ(s), highest expression level in amniotic fluid
CleanExiHS_C1orf50
GenevisibleiQ9BV19 HS

Organism-specific databases

HPAiHPA030236

Interactioni

Binary interactionsi

GO - Molecular functioni

Protein-protein interaction databases

BioGridi122528, 7 interactors
IntActiQ9BV19, 15 interactors
MINTiQ9BV19
STRINGi9606.ENSP00000361603

Structurei

3D structure databases

ProteinModelPortaliQ9BV19
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili71 – 101Sequence analysisAdd BLAST31

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiENOG410IE7Q Eukaryota
ENOG4111ERT LUCA
GeneTreeiENSGT00390000003084
HOGENOMiHOG000230218
HOVERGENiHBG080112
InParanoidiQ9BV19
OMAiPMRVSMH
OrthoDBiEOG091G0N15
PhylomeDBiQ9BV19
TreeFamiTF105992

Family and domain databases

InterProiView protein in InterPro
IPR019534 DUF2452
PANTHERiPTHR14553 PTHR14553, 1 hit
PfamiView protein in Pfam
PF10504 DUF2452, 1 hit

Sequencei

Sequence statusi: Complete.

Q9BV19-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEDAAAPGRT EGVLERQGAP PAAGQGGALV ELTPTPGGLA LVSPYHTHRA
60 70 80 90 100
GDPLDLVALA EQVQKADEFI RANATNKLTV IAEQIQHLQE QARKVLEDAH
110 120 130 140 150
RDANLHHVAC NIVKKPGNIY YLYKRESGQQ YFSIISPKEW GTSCPHDFLG
160 170 180 190
AYKLQHDLSW TPYEDIEKQD AKISMMDTLL SQSVALPPCT EPNFQGLTH
Length:199
Mass (Da):21,877
Last modified:February 10, 2009 - v2
Checksum:i499A0179C042E39D
GO

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_054409178T → M1 PublicationCorresponds to variant dbSNP:rs11548275Ensembl.1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC098484 Genomic DNA No translation available.
BC001508 mRNA Translation: AAH01508.1
BC001711 mRNA Translation: AAH01711.1
CCDSiCCDS473.1
RefSeqiNP_077002.2, NM_024097.3
UniGeneiHs.148845

Genome annotation databases

EnsembliENST00000372525; ENSP00000361603; ENSG00000164008
GeneIDi79078
KEGGihsa:79078
UCSCiuc001cia.5 human

Keywords - Coding sequence diversityi

Polymorphism

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC098484 Genomic DNA No translation available.
BC001508 mRNA Translation: AAH01508.1
BC001711 mRNA Translation: AAH01711.1
CCDSiCCDS473.1
RefSeqiNP_077002.2, NM_024097.3
UniGeneiHs.148845

3D structure databases

ProteinModelPortaliQ9BV19
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi122528, 7 interactors
IntActiQ9BV19, 15 interactors
MINTiQ9BV19
STRINGi9606.ENSP00000361603

PTM databases

iPTMnetiQ9BV19
PhosphoSitePlusiQ9BV19

Polymorphism and mutation databases

BioMutaiC1orf50
DMDMi223590163

Proteomic databases

EPDiQ9BV19
MaxQBiQ9BV19
PaxDbiQ9BV19
PeptideAtlasiQ9BV19
PRIDEiQ9BV19
ProteomicsDBi79151

Protocols and materials databases

DNASUi79078
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000372525; ENSP00000361603; ENSG00000164008
GeneIDi79078
KEGGihsa:79078
UCSCiuc001cia.5 human

Organism-specific databases

CTDi79078
EuPathDBiHostDB:ENSG00000164008.13
GeneCardsiC1orf50
HGNCiHGNC:28795 C1orf50
HPAiHPA030236
neXtProtiNX_Q9BV19
PharmGKBiPA134861089
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IE7Q Eukaryota
ENOG4111ERT LUCA
GeneTreeiENSGT00390000003084
HOGENOMiHOG000230218
HOVERGENiHBG080112
InParanoidiQ9BV19
OMAiPMRVSMH
OrthoDBiEOG091G0N15
PhylomeDBiQ9BV19
TreeFamiTF105992

Miscellaneous databases

ChiTaRSiC1orf50 human
GenomeRNAii79078
PROiPR:Q9BV19

Gene expression databases

BgeeiENSG00000164008 Expressed in 216 organ(s), highest expression level in amniotic fluid
CleanExiHS_C1orf50
GenevisibleiQ9BV19 HS

Family and domain databases

InterProiView protein in InterPro
IPR019534 DUF2452
PANTHERiPTHR14553 PTHR14553, 1 hit
PfamiView protein in Pfam
PF10504 DUF2452, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiCA050_HUMAN
AccessioniPrimary (citable) accession number: Q9BV19
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 3, 2006
Last sequence update: February 10, 2009
Last modified: September 12, 2018
This is version 116 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 1
    Human chromosome 1: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
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Main funding by: National Institutes of Health

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