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Entry version 146 (26 Feb 2020)
Sequence version 1 (01 Jun 2001)
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Protein

Respirasome Complex Assembly Factor 1

Gene

RAB5IF

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Acts as an assembly factor for mitochondrial respiratory complexes.1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Respirasome Complex Assembly Factor 11 Publication
Alternative name(s):
Rab5-interacting proteinImported
Short name:
RIP5Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:RAB5IFImported
Synonyms:C20orf24Imported, RCAF11 Publication
ORF Names:PNAS-11
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 20

Organism-specific databases

Human Gene Nomenclature Database

More...
HGNCi
HGNC:15870 RAB5IF

neXtProt; the human protein knowledge platform

More...
neXtProti
NX_Q9BUV8

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei45 – 64HelicalSequence analysisAdd BLAST20
Transmembranei68 – 90HelicalSequence analysisAdd BLAST23

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Membrane, Mitochondrion, Mitochondrion inner membrane

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

Open Targets

More...
OpenTargetsi
ENSG00000101084

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...
PharmGKBi
PA25740

Miscellaneous databases

Pharos NIH Druggable Genome Knowledgebase

More...
Pharosi
Q9BUV8 Tdark

Polymorphism and mutation databases

BioMuta curated single-nucleotide variation and disease association database

More...
BioMutai
C20orf24

Domain mapping of disease mutations (DMDM)

More...
DMDMi
24211596

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000794151 – 137Respirasome Complex Assembly Factor 1Add BLAST137

Proteomic databases

jPOST - Japan Proteome Standard Repository/Database

More...
jPOSTi
Q9BUV8

MassIVE - Mass Spectrometry Interactive Virtual Environment

More...
MassIVEi
Q9BUV8

MaxQB - The MaxQuant DataBase

More...
MaxQBi
Q9BUV8

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9BUV8

PeptideAtlas

More...
PeptideAtlasi
Q9BUV8

PRoteomics IDEntifications database

More...
PRIDEi
Q9BUV8

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
63658
79136 [Q9BUV8-1]
79137 [Q9BUV8-2]
79138 [Q9BUV8-3]
79139 [Q9BUV8-4]

Consortium for Top Down Proteomics

More...
TopDownProteomicsi
Q9BUV8-2 [Q9BUV8-2]
Q9BUV8-4 [Q9BUV8-4]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q9BUV8

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q9BUV8

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Expressed in embryonic stem cells and differentiated neuronal cells.1 Publication

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSG00000101084 Expressed in lower esophagus mucosa and 88 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q9BUV8 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q9BUV8 HS

Organism-specific databases

Human Protein Atlas

More...
HPAi
HPA057387

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts with NDUFS3, NDUFA4, NDUFV1, NDUFA9 and NDUFS8 of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) (PubMed:31536960).

Interacts with UQCRC2 of the ubiquinol-cytochrome c reductase complex (Complex III) (PubMed:31536960).

Interacts with COX5A and COX7C of the cytochrome c oxidase complex (Complex IV) (PubMed:31536960).

1 Publication

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
121015, 37 interactors

Protein interaction database and analysis system

More...
IntActi
Q9BUV8, 12 interactors

Molecular INTeraction database

More...
MINTi
Q9BUV8

STRING: functional protein association networks

More...
STRINGi
9606.ENSP00000341213

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
Q9BUV8 protein

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG3415 Eukaryota
ENOG41129XV LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00390000004786

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_120704_1_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q9BUV8

Identification of Orthologs from Complete Genome Data

More...
OMAi
WGLIPLK

Database of Orthologous Groups

More...
OrthoDBi
1562107at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q9BUV8

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR010742 Rab5ip
IPR029008 Rab5IP_fam

The PANTHER Classification System

More...
PANTHERi
PTHR12906 PTHR12906, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF07019 Rab5ip, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (5+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 5 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Note: Experimental confirmation may be lacking for some isoforms.

This entry has 5 described isoforms and 1 potential isoform that is computationally mapped.Show allAlign All

Isoform 1 (identifier: Q9BUV8-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MSGGRRKEEP PQPQLANGAL KVSVWSKVLR SDAAWEDKDE FLDVIYWFRQ
60 70 80 90 100
IIAVVLGVIW GVLPLRGFLG IAGFCLINAG VLYLYFSNYL QIDEEEYGGT
110 120 130
WELTKEGFMT SFALFMVCVA DSFTTGHLDH LLHCHPL
Length:137
Mass (Da):15,487
Last modified:June 1, 2001 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i4DC7A8E5D61B4C57
GO
Isoform 2 (identifier: Q9BUV8-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     118-137: CVADSFTTGHLDHLLHCHPL → IWIIFYTAIHYD

Show »
Length:129
Mass (Da):14,825
Checksum:iDA8C4AC79B9AFD22
GO
Isoform 3 (identifier: Q9BUV8-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     118-127: CVADSFTTGH → I

Show »
Length:128
Mass (Da):14,581
Checksum:iBB48F128EAA15C26
GO
Isoform 4 (identifier: Q9BUV8-4) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     74-137: FCLINAGVLY...LDHLLHCHPL → KGHCCSGAVCVCDD

Note: May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay.Curated
Show »
Length:87
Mass (Da):9,530
Checksum:i77A8B6359FD3660A
GO
Isoform 5 (identifier: Q9BUV8-5) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     74-137: FCLINAGVLY...LDHLLHCHPL → SFGSSFTLPS...ASVFSARVVT

Show »
Length:143
Mass (Da):15,893
Checksum:i51AE78E40CF4F979
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1W2PS95A0A1W2PS95_HUMAN
Uncharacterized protein RAB5IF
RAB5IF
117Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti15 – 33LANGA…LRSDA → PWANGASKSPSGVRCCGRR in AAB50849 (PubMed:8824393).CuratedAdd BLAST19
Sequence conflicti95 – 100EEYGGT → GRILVAR in AAK07515 (Ref. 2) Curated6
Sequence conflicti100T → Q in AAB50849 (PubMed:8824393).Curated1
Sequence conflicti110T → P in AAB50849 (PubMed:8824393).Curated1
Sequence conflicti114 – 137LFMVC…HCHPL → IVHGHLLLLFTSHPYSMMVS DSK in AAB50849 (PubMed:8824393).CuratedAdd BLAST24
Sequence conflicti137L → FIT in AAK07515 (Ref. 2) Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_00379574 – 137FCLIN…HCHPL → KGHCCSGAVCVCDD in isoform 4. 1 PublicationAdd BLAST64
Alternative sequenceiVSP_04723374 – 137FCLIN…HCHPL → SFGSSFTLPSIMTDGVQLPS APYPVQRTLLITAQELDRWG TPAPWNLEDPCFLDRESVCW ASVFSARVVT in isoform 5. CuratedAdd BLAST64
Alternative sequenceiVSP_003796118 – 137CVADS…HCHPL → IWIIFYTAIHYD in isoform 2. 1 PublicationAdd BLAST20
Alternative sequenceiVSP_003797118 – 127CVADSFTTGH → I in isoform 3. 1 Publication10

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AF112213 mRNA Translation: AAF17201.1
AF274936 mRNA Translation: AAK07515.1
AL050318 Genomic DNA No translation available.
CH471077 Genomic DNA Translation: EAW76122.1
CH471077 Genomic DNA Translation: EAW76120.1
CH471077 Genomic DNA Translation: EAW76123.1
CH471077 Genomic DNA Translation: EAW76124.1
BC001871 mRNA Translation: AAH01871.1
BC004446 mRNA Translation: AAH04446.1
S83364 mRNA Translation: AAB50849.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS13279.1 [Q9BUV8-5]
CCDS13280.1 [Q9BUV8-2]
CCDS56190.1 [Q9BUV8-1]

NCBI Reference Sequences

More...
RefSeqi
NP_001186463.1, NM_001199534.1 [Q9BUV8-1]
NP_061328.1, NM_018840.4 [Q9BUV8-2]
NP_955777.1, NM_199483.2 [Q9BUV8-5]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENST00000342422; ENSP00000341213; ENSG00000101084 [Q9BUV8-5]
ENST00000344795; ENSP00000340164; ENSG00000101084 [Q9BUV8-2]
ENST00000373852; ENSP00000362958; ENSG00000101084 [Q9BUV8-1]
ENST00000483815; ENSP00000432510; ENSG00000101084 [Q9BUV8-4]
ENST00000492721; ENSP00000435871; ENSG00000101084 [Q9BUV8-4]

Database of genes from NCBI RefSeq genomes

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GeneIDi
55969

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
hsa:55969

UCSC genome browser

More...
UCSCi
uc002xfq.3 human [Q9BUV8-1]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF112213 mRNA Translation: AAF17201.1
AF274936 mRNA Translation: AAK07515.1
AL050318 Genomic DNA No translation available.
CH471077 Genomic DNA Translation: EAW76122.1
CH471077 Genomic DNA Translation: EAW76120.1
CH471077 Genomic DNA Translation: EAW76123.1
CH471077 Genomic DNA Translation: EAW76124.1
BC001871 mRNA Translation: AAH01871.1
BC004446 mRNA Translation: AAH04446.1
S83364 mRNA Translation: AAB50849.1
CCDSiCCDS13279.1 [Q9BUV8-5]
CCDS13280.1 [Q9BUV8-2]
CCDS56190.1 [Q9BUV8-1]
RefSeqiNP_001186463.1, NM_001199534.1 [Q9BUV8-1]
NP_061328.1, NM_018840.4 [Q9BUV8-2]
NP_955777.1, NM_199483.2 [Q9BUV8-5]

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

BioGridi121015, 37 interactors
IntActiQ9BUV8, 12 interactors
MINTiQ9BUV8
STRINGi9606.ENSP00000341213

PTM databases

iPTMnetiQ9BUV8
PhosphoSitePlusiQ9BUV8

Polymorphism and mutation databases

BioMutaiC20orf24
DMDMi24211596

Proteomic databases

jPOSTiQ9BUV8
MassIVEiQ9BUV8
MaxQBiQ9BUV8
PaxDbiQ9BUV8
PeptideAtlasiQ9BUV8
PRIDEiQ9BUV8
ProteomicsDBi63658
79136 [Q9BUV8-1]
79137 [Q9BUV8-2]
79138 [Q9BUV8-3]
79139 [Q9BUV8-4]
TopDownProteomicsiQ9BUV8-2 [Q9BUV8-2]
Q9BUV8-4 [Q9BUV8-4]

Protocols and materials databases

The DNASU plasmid repository

More...
DNASUi
55969

Genome annotation databases

EnsembliENST00000342422; ENSP00000341213; ENSG00000101084 [Q9BUV8-5]
ENST00000344795; ENSP00000340164; ENSG00000101084 [Q9BUV8-2]
ENST00000373852; ENSP00000362958; ENSG00000101084 [Q9BUV8-1]
ENST00000483815; ENSP00000432510; ENSG00000101084 [Q9BUV8-4]
ENST00000492721; ENSP00000435871; ENSG00000101084 [Q9BUV8-4]
GeneIDi55969
KEGGihsa:55969
UCSCiuc002xfq.3 human [Q9BUV8-1]

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
55969

GeneCards: human genes, protein and diseases

More...
GeneCardsi
RAB5IF
HGNCiHGNC:15870 RAB5IF
HPAiHPA057387
neXtProtiNX_Q9BUV8
OpenTargetsiENSG00000101084
PharmGKBiPA25740

GenAtlas: human gene database

More...
GenAtlasi
Search...

Phylogenomic databases

eggNOGiKOG3415 Eukaryota
ENOG41129XV LUCA
GeneTreeiENSGT00390000004786
HOGENOMiCLU_120704_1_0_1
InParanoidiQ9BUV8
OMAiWGLIPLK
OrthoDBi1562107at2759
PhylomeDBiQ9BUV8

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
C20orf24 human

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

More...
GenomeRNAii
55969
PharosiQ9BUV8 Tdark

Protein Ontology

More...
PROi
PR:Q9BUV8
RNActiQ9BUV8 protein

Gene expression databases

BgeeiENSG00000101084 Expressed in lower esophagus mucosa and 88 other tissues
ExpressionAtlasiQ9BUV8 baseline and differential
GenevisibleiQ9BUV8 HS

Family and domain databases

InterProiView protein in InterPro
IPR010742 Rab5ip
IPR029008 Rab5IP_fam
PANTHERiPTHR12906 PTHR12906, 1 hit
PfamiView protein in Pfam
PF07019 Rab5ip, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiRCAF1_HUMAN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9BUV8
Secondary accession number(s): E1P5U0
, O00605, Q5QPG6, Q5QPG7, Q9BT03, Q9BZU7, Q9UI05
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 19, 2002
Last sequence update: June 1, 2001
Last modified: February 26, 2020
This is version 146 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Human chromosome 20
    Human chromosome 20: entries, gene names and cross-references to MIM
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