UniProtKB - Q9BL19 (RL17_CAEEL)
Protein
60S ribosomal protein L17
Gene
rpl-17
Organism
Caenorhabditis elegans
Status
Functioni
GO - Molecular functioni
- structural constituent of ribosome Source: GO_Central
GO - Biological processi
- cytoplasmic translation Source: GO_Central
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein |
Enzyme and pathway databases
Reactomei | R-CEL-156827, L13a-mediated translational silencing of Ceruloplasmin expression R-CEL-1799339, SRP-dependent cotranslational protein targeting to membrane R-CEL-72689, Formation of a pool of free 40S subunits R-CEL-72706, GTP hydrolysis and joining of the 60S ribosomal subunit R-CEL-975956, Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) R-CEL-975957, Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) |
Names & Taxonomyi
Protein namesi | Recommended name: 60S ribosomal protein L17 |
Gene namesi | Name:rpl-17 ORF Names:Y48G8AL.8 |
Organismi | Caenorhabditis elegans |
Taxonomic identifieri | 6239 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditina › Rhabditomorpha › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis |
Proteomesi |
|
Organism-specific databases
WormBasei | Y48G8AL.8 ; CE22195 ; WBGene00004429 ; rpl-17 |
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000323400 | 1 – 187 | 60S ribosomal protein L17Add BLAST | 187 |
Proteomic databases
EPDi | Q9BL19 |
PaxDbi | Q9BL19 |
PeptideAtlasi | Q9BL19 |
Expressioni
Gene expression databases
Bgeei | WBGene00004429, Expressed in material anatomical entity and 5 other tissues |
Interactioni
Protein-protein interaction databases
BioGRIDi | 37191, 96 interactors |
DIPi | DIP-26651N |
STRINGi | 6239.Y48G8AL.8a |
Family & Domainsi
Sequence similaritiesi
Belongs to the universal ribosomal protein uL22 family.Curated
Phylogenomic databases
eggNOGi | KOG3353, Eukaryota |
GeneTreei | ENSGT00950000183010 |
HOGENOMi | CLU_083987_0_1_1 |
InParanoidi | Q9BL19 |
OMAi | ANAEYKG |
OrthoDBi | 1362349at2759 |
PhylomeDBi | Q9BL19 |
Family and domain databases
CDDi | cd00336, Ribosomal_L22, 1 hit |
Gene3Di | 3.90.470.10, 1 hit |
HAMAPi | MF_01331_A, Ribosomal_L22_A, 1 hit |
InterProi | View protein in InterPro IPR001063, Ribosomal_L22 IPR018260, Ribosomal_L22/L17_CS IPR005721, Ribosomal_L22/L17_euk/arc IPR036394, Ribosomal_L22/L17_sf |
PANTHERi | PTHR11593, PTHR11593, 1 hit |
Pfami | View protein in Pfam PF00237, Ribosomal_L22, 1 hit |
SUPFAMi | SSF54843, SSF54843, 1 hit |
TIGRFAMsi | TIGR01038, uL22_arch_euk, 1 hit |
PROSITEi | View protein in PROSITE PS00464, RIBOSOMAL_L22, 1 hit |
s (2)i Sequence
Sequence statusi: Complete.
This entry describes 2 produced by isoformsialternative splicing. AlignAdd to basketIsoform a (identifier: Q9BL19-1) [UniParc]FASTAAdd to basket
This isoform has been chosen as the sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. canonicali
10 20 30 40 50
MTKVHYSRAP ENSTKSCKAR GSDLRVHFKN THEAAMALRG MPLRRAQAFL
60 70 80 90 100
NHVKEHKEIV PFRRFHGGIG RAAQTKQWNT TQGRWPVKSA DFLLDLLKNA
110 120 130 140 150
ESNAEYKGLD VDHLVIEHIN VQRAAKLRRR TYRAHGRINP YMSSPCHIEV
160 170 180
ILAEKEDVVS KPTDDAAPKV KKESKRKQRR QLARGEF
Alternative sequence
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Alternative sequenceiVSP_032019 | 66 – 93 | Missing in isoform b. CuratedAdd BLAST | 28 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | FO081800 Genomic DNA Translation: CCD73463.1 FO081800 Genomic DNA Translation: CCD73464.1 |
RefSeqi | NP_740781.1, NM_170799.4 [Q9BL19-1] |
Genome annotation databases
EnsemblMetazoai | Y48G8AL.8.1; Y48G8AL.8.1; WBGene00004429 [Q9BL19-1] |
GeneIDi | 171692 |
KEGGi | cel:CELE_Y48G8AL.8 |
UCSCi | Y48G8AL.8b, c. elegans [Q9BL19-1] |
Keywords - Coding sequence diversityi
Alternative splicingSimilar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | FO081800 Genomic DNA Translation: CCD73463.1 FO081800 Genomic DNA Translation: CCD73464.1 |
RefSeqi | NP_740781.1, NM_170799.4 [Q9BL19-1] |
3D structure databases
SMRi | Q9BL19 |
ModBasei | Search... |
Protein-protein interaction databases
BioGRIDi | 37191, 96 interactors |
DIPi | DIP-26651N |
STRINGi | 6239.Y48G8AL.8a |
Proteomic databases
EPDi | Q9BL19 |
PaxDbi | Q9BL19 |
PeptideAtlasi | Q9BL19 |
Genome annotation databases
EnsemblMetazoai | Y48G8AL.8.1; Y48G8AL.8.1; WBGene00004429 [Q9BL19-1] |
GeneIDi | 171692 |
KEGGi | cel:CELE_Y48G8AL.8 |
UCSCi | Y48G8AL.8b, c. elegans [Q9BL19-1] |
Organism-specific databases
CTDi | 171692 |
WormBasei | Y48G8AL.8 ; CE22195 ; WBGene00004429 ; rpl-17 |
Phylogenomic databases
eggNOGi | KOG3353, Eukaryota |
GeneTreei | ENSGT00950000183010 |
HOGENOMi | CLU_083987_0_1_1 |
InParanoidi | Q9BL19 |
OMAi | ANAEYKG |
OrthoDBi | 1362349at2759 |
PhylomeDBi | Q9BL19 |
Enzyme and pathway databases
Reactomei | R-CEL-156827, L13a-mediated translational silencing of Ceruloplasmin expression R-CEL-1799339, SRP-dependent cotranslational protein targeting to membrane R-CEL-72689, Formation of a pool of free 40S subunits R-CEL-72706, GTP hydrolysis and joining of the 60S ribosomal subunit R-CEL-975956, Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) R-CEL-975957, Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) |
Miscellaneous databases
PROi | PR:Q9BL19 |
Gene expression databases
Bgeei | WBGene00004429, Expressed in material anatomical entity and 5 other tissues |
Family and domain databases
CDDi | cd00336, Ribosomal_L22, 1 hit |
Gene3Di | 3.90.470.10, 1 hit |
HAMAPi | MF_01331_A, Ribosomal_L22_A, 1 hit |
InterProi | View protein in InterPro IPR001063, Ribosomal_L22 IPR018260, Ribosomal_L22/L17_CS IPR005721, Ribosomal_L22/L17_euk/arc IPR036394, Ribosomal_L22/L17_sf |
PANTHERi | PTHR11593, PTHR11593, 1 hit |
Pfami | View protein in Pfam PF00237, Ribosomal_L22, 1 hit |
SUPFAMi | SSF54843, SSF54843, 1 hit |
TIGRFAMsi | TIGR01038, uL22_arch_euk, 1 hit |
PROSITEi | View protein in PROSITE PS00464, RIBOSOMAL_L22, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | RL17_CAEEL | |
Accessioni | Q9BL19Primary (citable) accession number: Q9BL19 Secondary accession number(s): Q8WTK4 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | March 18, 2008 |
Last sequence update: | June 1, 2001 | |
Last modified: | April 7, 2021 | |
This is version 133 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Caenorhabditis annotation project |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Ribosomal proteins
Ribosomal proteins families and list of entries - Caenorhabditis elegans
Caenorhabditis elegans: entries, gene names and cross-references to WormBase - SIMILARITY comments
Index of protein domains and families