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Entry version 149 (18 Sep 2019)
Sequence version 1 (01 Jun 2001)
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Protein
Submitted name:

AFaDin (Actin filament binding protein) homolog

Gene

afd-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

SignaLink: a signaling pathway resource with multi-layered regulatory networks

More...
SignaLinki
Q9BIC1

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
AFaDin (Actin filament binding protein) homologImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:afd-1Imported
ORF Names:CELE_W03F11.6Imported, W03F11.6Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiCaenorhabditis elegansImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri6239 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditinaRhabditomorphaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001940 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome I

Organism-specific databases

WormBase

More...
WormBasei
W03F11.6a ; CE26729 ; WBGene00021009 ; afd-1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

Encyclopedia of Proteome Dynamics

More...
EPDi
Q9BIC1

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9BIC1

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
WBGene00021009 Expressed in 5 organ(s), highest expression level in multi-cellular organism

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q9BIC1 baseline

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

WithEntry#Exp.IntActNotes
csc-1O459522EBI-317844,EBI-328477

GO - Molecular functioni

Protein-protein interaction databases

Database of interacting proteins

More...
DIPi
DIP-25922N

Protein interaction database and analysis system

More...
IntActi
Q9BIC1, 24 interactors

STRING: functional protein association networks

More...
STRINGi
6239.W03F11.6a

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q9BIC1

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini34 – 128Ras-associatingInterPro annotationAdd BLAST95
Domaini215 – 320Ras-associatingInterPro annotationAdd BLAST106
Domaini610 – 841DiluteInterPro annotationAdd BLAST232
Domaini970 – 1055PDZInterPro annotationAdd BLAST86

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni144 – 175DisorderedSequence analysisAdd BLAST32
Regioni1061 – 1236DisorderedSequence analysisAdd BLAST176
Regioni1283 – 1313DisorderedSequence analysisAdd BLAST31
Regioni1597 – 1658DisorderedSequence analysisAdd BLAST62

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1061 – 1078PolarSequence analysisAdd BLAST18
Compositional biasi1099 – 1150PolarSequence analysisAdd BLAST52
Compositional biasi1176 – 1199PolarSequence analysisAdd BLAST24
Compositional biasi1210 – 1226PolarSequence analysisAdd BLAST17
Compositional biasi1634 – 1658PolarSequence analysisAdd BLAST25

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1892 Eukaryota
ENOG410XR0S LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000155237

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q9BIC1

Database of Orthologous Groups

More...
OrthoDBi
185439at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q9BIC1

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00060 FHA, 1 hit
cd15471 Myo5p-like_CBD_afadin, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR037977 CBD_Afadin
IPR002710 Dilute_dom
IPR000253 FHA_dom
IPR001478 PDZ
IPR036034 PDZ_sf
IPR000159 RA_dom
IPR008984 SMAD_FHA_dom_sf
IPR029071 Ubiquitin-like_domsf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01843 DIL, 1 hit
PF00498 FHA, 1 hit
PF00595 PDZ, 1 hit
PF00788 RA, 2 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01132 DIL, 1 hit
SM00228 PDZ, 1 hit
SM00314 RA, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF49879 SSF49879, 1 hit
SSF50156 SSF50156, 1 hit
SSF54236 SSF54236, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51126 DILUTE, 1 hit
PS50106 PDZ, 1 hit
PS50200 RA, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 14 potential isoforms that are computationally mapped.Show allAlign All

Q9BIC1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVSEREQLAC LVQQWNENRL DLFHLSYPTE DLEVEGVMRF YFQDGGEKVL
60 70 80 90 100
TKCVRVSSTA TTRAVVDALS EKFLPDLKML SNDTYSLWEV HENGEERKLL
110 120 130 140 150
DEEKPLVVQL QWHKDDREGR FLLKKDAAPP VSLLNLQEAD QKNTRFAKKK
160 170 180 190 200
DKEPKKKNQK NFVQVNGGRE EAQSQDDIYK QVPFNTFTRT ISNPEAVMRK
210 220 230 240 250
RREKKLETKL KEMMFGGSLK VYGGEIVPTR PYVSILAEIN ENADRILGAA
260 270 280 290 300
LEKYGLEHSK DDFILVEVSN DDDRKSMSDL REIDGRPIPP TECPLFEMTA
310 320 330 340 350
RSGNGENGFD SFLAIKRKPH DYQVPSTSVV APSSVTLPMS PLTSLPPQIH
360 370 380 390 400
NLPVLIVMNN DGHLSTHRIT LHEGVTEVGS DSQMSNFSQH NIYLDGPDIR
410 420 430 440 450
GRHAAIAFME GVVTLTPSTR DAYLEVNGHQ LMQTEILRDG DHIRIGADHS
460 470 480 490 500
FKFSTSSSQA NQINSTNISN SNQRHFQQQT FYPEMADSRA STARCAPSDY
510 520 530 540 550
CSLPQQNDYY PPSMSGSSVS SSRQEDLMMH SNNNILPPYS TKSAQEPLQL
560 570 580 590 600
PLSIQIGDYN VWDFLAEVMS NRAATSSEMS TFRLSPAYSL YLALRSFHTH
610 620 630 640 650
NKPYSVQFFS RIESNFKQIA QECSSKDDLI FWLANASEFN HLVERDTELK
660 670 680 690 700
ASRYGKISVE IERIFRRLVA VLQSVIRPAA RALLDIHLND HDATGDVIHL
710 720 730 740 750
LDTTMRQARI CGLNAALTIQ LCGHLLHMVN AFVFNSLVSV NLPAAQLNTR
760 770 780 790 800
LGKCLQYRIE SIHRFCERMG VEMAAECHLD RSRQAANLLA TQKNDVAALG
810 820 830 840 850
STCYKLNSLQ VVHILSGFEP DDGEIPCDDD VVDRICRLAE KQADKLTLED
860 870 880 890 900
GQRVTLEESD ELNLPFLIPQ DGYFVEQFRT VPDGLWQYLQ QLQHRRLCHT
910 920 930 940 950
VSLTPAPPAA MTHSMHAMHI GASDAHYHQH QHQQQQNPIV RSVSQTTLTS
960 970 980 990 1000
IPTTQFGDSF GSAVSDTISK VTLRKNGGGI GLSIVAAQGV GDRQMGIYVK
1010 1020 1030 1040 1050
KVVEGTPAAH DGRLETGDQL LSVNGHSLIG ISQEDAARLM TQSGNEVHFD
1060 1070 1080 1090 1100
VRKRAAHRNG LSNWLGSQTP TTSNFIAPSP STVPPPSYSH VGRTPSYDGQ
1110 1120 1130 1140 1150
PPPSYNHRNG GASGAGGSSG RNSAFVAPLS NSSSNASSSH MQQHYAHHNM
1160 1170 1180 1190 1200
MHNGNLSAAP GAPAGDPKHY RSSSASDLQH DPNASFSQSS MTGSARSSVF
1210 1220 1230 1240 1250
DKLPSHYRHS TRPTVIQPTR PSAQSPSALR KAAAASPVSN LYRPTSASNL
1260 1270 1280 1290 1300
FAPPRNSGGL VGYSSNAARE STQDIHRALN DLELNSPLAR STPNEEYRIP
1310 1320 1330 1340 1350
PPRVPTVTST SSNYAPLHSI RPASMYGYQS PSSSTTVIPA PKGVASSSNN
1360 1370 1380 1390 1400
TSPRVNVTLG GALSSSRSHN SLSQEPAIVI RPVDLNMPKA TPPASIRGAV
1410 1420 1430 1440 1450
PTAITQALQL QPNGGGAVLR QVRPASGLRE RLQDADVRNL EKTNTALMSY
1460 1470 1480 1490 1500
EAVNEELDRL DAKQNTMTID EQRRYRELLN VVAEQSRARK LLSEIRSPPT
1510 1520 1530 1540 1550
SYQEREIPIH VQKEQQQHRR ETVIDDIPHS SSSVENVSPV SPPESRKVQF
1560 1570 1580 1590 1600
IDEVVQYQTP TSGANHAFFD DVPVLDSPGI VGTNEIYRDP RQRRLNELQD
1610 1620 1630 1640 1650
RNRSSENGAA DGAKLGFRDK QRLFARQIGE DTAPRQRMNE SSAQRLIETD

IAATPQKP
Length:1,658
Mass (Da):183,637
Last modified:June 1, 2001 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i53245915B8B302B7
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 14 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q86NJ4Q86NJ4_CAEEL
AFaDin (Actin filament binding prot...
afd-1 CELE_W03F11.6, W03F11.6
1,660Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A2C9C357A0A2C9C357_CAEEL
AFaDin (Actin filament binding prot...
afd-1 CELE_W03F11.6, W03F11.6
1,498Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
Q86NJ3Q86NJ3_CAEEL
AFaDin (Actin filament binding prot...
afd-1 CELE_W03F11.6, W03F11.6
1,562Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
X5LPT9X5LPT9_CAEEL
AFaDin (Actin filament binding prot...
afd-1 CELE_W03F11.6, W03F11.6
1,564Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
Q9BIC0Q9BIC0_CAEEL
AFaDin (Actin filament binding prot...
afd-1 CELE_W03F11.6, W03F11.6
678Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
M1ZJY5M1ZJY5_CAEEL
AFaDin (Actin filament binding prot...
afd-1 CELE_W03F11.6, W03F11.6
1,252Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
X5LV54X5LV54_CAEEL
AFaDin (Actin filament binding prot...
afd-1 CELE_W03F11.6, W03F11.6
1,224Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
X5M8U5X5M8U5_CAEEL
AFaDin (Actin filament binding prot...
afd-1 CELE_W03F11.6, W03F11.6
1,320Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
X5M5P8X5M5P8_CAEEL
AFaDin (Actin filament binding prot...
afd-1 CELE_W03F11.6, W03F11.6
1,286Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
X5LX73X5LX73_CAEEL
AFaDin (Actin filament binding prot...
afd-1 CELE_W03F11.6, W03F11.6
1,131Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
There are more potential isoformsShow all

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
BX284601 Genomic DNA Translation: CCD69313.1

NCBI Reference Sequences

More...
RefSeqi
NP_490938.3, NM_058537.4

Genome annotation databases

Ensembl metazoan genome annotation project

More...
EnsemblMetazoai
W03F11.6a.1; W03F11.6a.1; WBGene00021009

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
171776

UCSC genome browser

More...
UCSCi
W03F11.6d c. elegans

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA Translation: CCD69313.1
RefSeqiNP_490938.3, NM_058537.4

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...
PDBei

Protein Data Bank RCSB

More...
RCSB PDBi

Protein Data Bank Japan

More...
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2M4NNMR-A214-320[»]
SMRiQ9BIC1
ModBaseiSearch...

Protein-protein interaction databases

DIPiDIP-25922N
IntActiQ9BIC1, 24 interactors
STRINGi6239.W03F11.6a

Proteomic databases

EPDiQ9BIC1
PaxDbiQ9BIC1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiW03F11.6a.1; W03F11.6a.1; WBGene00021009
GeneIDi171776
UCSCiW03F11.6d c. elegans

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
171776
WormBaseiW03F11.6a ; CE26729 ; WBGene00021009 ; afd-1

Phylogenomic databases

eggNOGiKOG1892 Eukaryota
ENOG410XR0S LUCA
GeneTreeiENSGT00940000155237
InParanoidiQ9BIC1
OrthoDBi185439at2759
PhylomeDBiQ9BIC1

Enzyme and pathway databases

SignaLinkiQ9BIC1

Gene expression databases

BgeeiWBGene00021009 Expressed in 5 organ(s), highest expression level in multi-cellular organism
ExpressionAtlasiQ9BIC1 baseline

Family and domain databases

CDDicd00060 FHA, 1 hit
cd15471 Myo5p-like_CBD_afadin, 1 hit
InterProiView protein in InterPro
IPR037977 CBD_Afadin
IPR002710 Dilute_dom
IPR000253 FHA_dom
IPR001478 PDZ
IPR036034 PDZ_sf
IPR000159 RA_dom
IPR008984 SMAD_FHA_dom_sf
IPR029071 Ubiquitin-like_domsf
PfamiView protein in Pfam
PF01843 DIL, 1 hit
PF00498 FHA, 1 hit
PF00595 PDZ, 1 hit
PF00788 RA, 2 hits
SMARTiView protein in SMART
SM01132 DIL, 1 hit
SM00228 PDZ, 1 hit
SM00314 RA, 2 hits
SUPFAMiSSF49879 SSF49879, 1 hit
SSF50156 SSF50156, 1 hit
SSF54236 SSF54236, 2 hits
PROSITEiView protein in PROSITE
PS51126 DILUTE, 1 hit
PS50106 PDZ, 1 hit
PS50200 RA, 2 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ9BIC1_CAEEL
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9BIC1
Secondary accession number(s): Q9N400
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: September 18, 2019
This is version 149 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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