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Entry version 105 (08 May 2019)
Sequence version 2 (20 May 2008)
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Protein

Callose synthase 1

Gene

CALS1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Involved in callose synthesis at the forming cell plate during cytokinesis. Not required for callose formation after wounding or pathogen attack. During plant growth and development, callose is found as a transitory component of the cell plate in dividing cells, is a major component of pollen mother cell walls and pollen tubes, and is found as a structural component of plasmodesmatal canals.1 Publication

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>This subsection of the ‘Function’ section describes regulatory mechanisms for enzymes, transporters or microbial transcription factors, and reports the components which regulate (by activation or inhibition) the reaction.<p><a href='/help/activity_regulation' target='_top'>More...</a></p>Activity regulationi

May be regulated by ROP1 through the interaction with UGT1.

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionGlycosyltransferase, Transferase
Biological processCell shape, Cell wall biogenesis/degradation

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
ARA:AT1G05570-MONOMER

Protein family/group databases

Carbohydrate-Active enZymes

More...
CAZyi
GT48 Glycosyltransferase Family 48

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Callose synthase 1 (EC:2.4.1.34)
Alternative name(s):
1,3-beta-glucan synthase
Protein GLUCAN SYNTHASE-LIKE 6
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:CALS1
Synonyms:GSL6
Ordered Locus Names:At1g05570
ORF Names:F3F20.1, T25N20.22
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 1

Organism-specific databases

Arabidopsis Information Portal

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Araporti
AT1G05570

The Arabidopsis Information Resource

More...
TAIRi
locus:2031938 AT1G05570

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the subcellular compartment where each non-membrane region of a membrane-spanning protein is found.<p><a href='/help/topo_dom' target='_top'>More...</a></p>Topological domaini1 – 481CytoplasmicSequence analysisAdd BLAST481
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei482 – 502HelicalSequence analysisAdd BLAST21
Topological domaini503 – 505ExtracellularSequence analysis3
Transmembranei506 – 526HelicalSequence analysisAdd BLAST21
Topological domaini527 – 552CytoplasmicSequence analysisAdd BLAST26
Transmembranei553 – 573HelicalSequence analysisAdd BLAST21
Topological domaini574 – 599ExtracellularSequence analysisAdd BLAST26
Transmembranei600 – 620HelicalSequence analysisAdd BLAST21
Topological domaini621 – 655CytoplasmicSequence analysisAdd BLAST35
Transmembranei656 – 676HelicalSequence analysisAdd BLAST21
Topological domaini677 – 712ExtracellularSequence analysisAdd BLAST36
Transmembranei713 – 733HelicalSequence analysisAdd BLAST21
Topological domaini734 – 1511CytoplasmicSequence analysisAdd BLAST778
Transmembranei1512 – 1532HelicalSequence analysisAdd BLAST21
Topological domaini1533 – 1560ExtracellularSequence analysisAdd BLAST28
Transmembranei1561 – 1581HelicalSequence analysisAdd BLAST21
Topological domaini1582 – 1591CytoplasmicSequence analysis10
Transmembranei1592 – 1612HelicalSequence analysisAdd BLAST21
Topological domaini1613 – 1655ExtracellularSequence analysisAdd BLAST43
Transmembranei1656 – 1676HelicalSequence analysisAdd BLAST21
Topological domaini1677 – 1682CytoplasmicSequence analysis6
Transmembranei1683 – 1703HelicalSequence analysisAdd BLAST21
Topological domaini1704 – 1755ExtracellularSequence analysisAdd BLAST52
Transmembranei1756 – 1776HelicalSequence analysisAdd BLAST21
Topological domaini1777 – 1787CytoplasmicSequence analysisAdd BLAST11
Transmembranei1788 – 1808HelicalSequence analysisAdd BLAST21
Topological domaini1809 – 1828ExtracellularSequence analysisAdd BLAST20
Transmembranei1829 – 1849HelicalSequence analysisAdd BLAST21
Topological domaini1850 – 1851CytoplasmicSequence analysis2
Transmembranei1852 – 1872HelicalSequence analysisAdd BLAST21
Topological domaini1873 – 1894ExtracellularSequence analysisAdd BLAST22
Transmembranei1895 – 1915HelicalSequence analysisAdd BLAST21
Topological domaini1916 – 1950CytoplasmicSequence analysisAdd BLAST35

Keywords - Cellular componenti

Cell membrane, Membrane

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003345731 – 1950Callose synthase 1Add BLAST1950

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi577N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9AUE0

PRoteomics IDEntifications database

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PRIDEi
Q9AUE0

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q9AUE0

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

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ExpressionAtlasi
Q9AUE0 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q9AUE0 AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts with UGT1 and phragmoplastin. May form a functional complex with UGT1, ROP1 and phragmoplastin.2 Publications

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
22301, 1 interactor

Protein interaction database and analysis system

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IntActi
Q9AUE0, 2 interactors

STRING: functional protein association networks

More...
STRINGi
3702.AT1G05570.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q9AUE0

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi7 – 12Poly-Pro6

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the glycosyltransferase 48 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

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eggNOGi
KOG0916 Eukaryota
ENOG410XQ8V LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000029513

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q9AUE0

KEGG Orthology (KO)

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KOi
K11000

Database of Orthologous Groups

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OrthoDBi
48442at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q9AUE0

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.25.40.270, 1 hit

Integrated resource of protein families, domains and functional sites

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InterProi
View protein in InterPro
IPR026953 CALS
IPR026899 FKS1-like_dom1
IPR003440 Glyco_trans_48
IPR023175 VPS_Vta1/CALS_N
IPR039431 Vta1/CALS_N

The PANTHER Classification System

More...
PANTHERi
PTHR12741:SF59 PTHR12741:SF59, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF14288 FKS1_dom1, 1 hit
PF02364 Glucan_synthase, 2 hits
PF04652 Vta1, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01205 FKS1_dom1, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 1 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoform i produced by alternative splicing. AlignAdd to basket
Note: A number of isoforms are produced. According to EST sequences.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Isoform 1 (identifier: Q9AUE0-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MAQRREPDPP PPQRRILRTQ TVGSLGEAML DSEVVPSSLV EIAPILRVAN
60 70 80 90 100
EVEASNPRVA YLCRFYAFEK AHRLDPTSSG RGVRQFKTAL LQRLERENET
110 120 130 140 150
TLAGRQKSDA REMQSFYQHY YKKYIQALLN AADKADRAQL TKAYQTAAVL
160 170 180 190 200
FEVLKAVNQT EDVEVADEIL ETHNKVEEKT QIYVPYNILP LDPDSQNQAI
210 220 230 240 250
MRLPEIQAAV AALRNTRGLP WTAGHKKKLD EDILDWLQSM FGFQKDNVLN
260 270 280 290 300
QREHLILLLA NVHIRQFPKP DQQPKLDDRA LTIVMKKLFR NYKKWCKYLG
310 320 330 340 350
RKSSLWLPTI QQEVQQRKLL YMGLYLLIWG EAANLRFMPE CLCYIYHHMA
360 370 380 390 400
FELYGMLAGS VSPMTGEHVK PAYGGEDEAF LQKVVTPIYQ TISKEAKRSR
410 420 430 440 450
GGKSKHSVWR NYDDLNEYFW SIRCFRLGWP MRADADFFCQ TAEELRLERS
460 470 480 490 500
EIKSNSGDRW MGKVNFVEIR SFWHIFRSFD RLWSFYILCL QAMIVIAWNG
510 520 530 540 550
SGELSAIFQG DVFLKVLSVF ITAAILKLAQ AVLDIALSWK ARHSMSLYVK
560 570 580 590 600
LRYVMKVGAA AVWVVVMAVT YAYSWKNASG FSQTIKNWFG GHSHNSPSLF
610 620 630 640 650
IVAILIYLSP NMLSALLFLF PFIRRYLERS DYKIMMLMMW WSQPRLYIGR
660 670 680 690 700
GMHESALSLF KYTMFWIVLL ISKLAFSYYA EIKPLVGPTK DIMRIHISVY
710 720 730 740 750
SWHEFFPHAK NNLGVVIALW SPVILVYFMD TQIWYAIVST LVGGLNGAFR
760 770 780 790 800
RLGEIRTLGM LRSRFQSIPG AFNDCLVPQD NSDDTKKKRF RATFSRKFDQ
810 820 830 840 850
LPSSKDKEAA RFAQMWNKII SSFREEDLIS DREMELLLVP YWSDPDLDLI
860 870 880 890 900
RWPPFLLASK IPIALDMAKD SNGKDRELKK RLAVDSYMTC AVRECYASFK
910 920 930 940 950
NLINYLVVGE REGQVINDIF SKIDEHIEKE TLITELNLSA LPDLYGQFVR
960 970 980 990 1000
LIEYLLENRE EDKDQIVIVL LNMLELVTRD IMEEEVPSLL ETAHNGSYVK
1010 1020 1030 1040 1050
YDVMTPLHQQ RKYFSQLRFP VYSQTEAWKE KIKRLHLLLT VKESAMDVPS
1060 1070 1080 1090 1100
NLEARRRLTF FSNSLFMDMP PAPKIRNMLS FSVLTPYFSE DVLFSIFGLE
1110 1120 1130 1140 1150
QQNEDGVSIL FYLQKIFPDE WTNFLERVKC GNEEELRARE DLEEELRLWA
1160 1170 1180 1190 1200
SYRGQTLTKT VRGMMYYRKA LELQAFLDMA KDEELLKGYK ALELTSEEAS
1210 1220 1230 1240 1250
KSGGSLWAQC QALADMKFTF VVSCQQYSIH KRSGDQRAKD ILRLMTTYPS
1260 1270 1280 1290 1300
IRVAYIDEVE QTHKESYKGT EEKIYYSALV KAAPQTKPMD SSESVQTLDQ
1310 1320 1330 1340 1350
LIYRIKLPGP AILGEGKPEN QNHAIIFTRG EGLQTIDMNQ DNYMEEAFKM
1360 1370 1380 1390 1400
RNLLQEFLEK HGGVRCPTIL GLREHIFTGS VSSLAWFMSN QENSFVTIGQ
1410 1420 1430 1440 1450
RVLASPLKVR FHYGHPDIFD RLFHLTRGGI CKASKVINLS EDIFAGFNST
1460 1470 1480 1490 1500
LREGNVTHHE YIQVGKGRDV GLNQISMFEA KIANGNGEQT LSRDLYRLGH
1510 1520 1530 1540 1550
RFDFFRMLSC YFTTIGFYFS TMLTVLTVYV FLYGRLYLVL SGLEEGLSSQ
1560 1570 1580 1590 1600
RAFRNNKPLE AALASQSFVQ IGFLMALPMM MEIGLERGFH NALIEFVLMQ
1610 1620 1630 1640 1650
LQLASVFFTF QLGTKTHYYG RTLFHGGAEY RGTGRGFVVF HAKFAENYRF
1660 1670 1680 1690 1700
YSRSHFVKGI ELMILLLVYQ IFGQSYRGVV TYILITVSIW FMVVTWLFAP
1710 1720 1730 1740 1750
FLFNPSGFEW QKIVDDWTDW NKWIYNRGGI GVPPEKSWES WWEKELEHLR
1760 1770 1780 1790 1800
HSGVRGITLE IFLALRFFIF QYGLVYHLST FKGKNQSFWV YGASWFVILF
1810 1820 1830 1840 1850
ILLIVKGLGV GRRRFSTNFQ LLFRIIKGLV FLTFVAILIT FLALPLITIK
1860 1870 1880 1890 1900
DLFICMLAFM PTGWGMLLIA QACKPLIQQL GIWSSVRTLA RGYEIVMGLL
1910 1920 1930 1940 1950
LFTPVAFLAW FPFVSEFQTR MLFNQAFSRG LQISRILGGQ RKDRSSKNKE
Length:1,950
Mass (Da):225,761
Last modified:May 20, 2008 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i25EA79B202BA7443
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F4I8T3F4I8T3_ARATH
Callose synthase 1
CALS1 ATGSL06, ATGSL6, callose synthase 1, GLUCAN SYNTHASE-LIKE 6, GSL06
1,909Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAD30609 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAF79729 differs from that shown. Reason: Erroneous gene model prediction.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti88T → A in AAK37413 (PubMed:11283334).Curated1
Sequence conflicti126Q → R in AAK37413 (PubMed:11283334).Curated1
Sequence conflicti560A → S in AAK37413 (PubMed:11283334).Curated1
Sequence conflicti725L → P in AAK37413 (PubMed:11283334).Curated1
Sequence conflicti1268 – 1270KGT → EGA in AAK37413 (PubMed:11283334).Curated3
Sequence conflicti1396V → A in BAF00852 (Ref. 4) Curated1
Sequence conflicti1653R → H in BAF00852 (Ref. 4) Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AF237733 mRNA Translation: AAK37413.1
AC005106 Genomic DNA Translation: AAF79729.1 Sequence problems.
AC007153 Genomic DNA Translation: AAD30609.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE27855.1
CP002684 Genomic DNA Translation: ANM60178.1
CP002684 Genomic DNA Translation: ANM60179.1
AK228963 mRNA Translation: BAF00852.1

Protein sequence database of the Protein Information Resource

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PIRi
E86189

NCBI Reference Sequences

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RefSeqi
NP_001322482.1, NM_001331555.1 [Q9AUE0-1]
NP_001322483.1, NM_001331556.1 [Q9AUE0-1]
NP_563743.2, NM_100436.5 [Q9AUE0-1]

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT1G05570.1; AT1G05570.1; AT1G05570 [Q9AUE0-1]
AT1G05570.3; AT1G05570.3; AT1G05570 [Q9AUE0-1]
AT1G05570.4; AT1G05570.4; AT1G05570 [Q9AUE0-1]

Database of genes from NCBI RefSeq genomes

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GeneIDi
837059

Gramene; a comparative resource for plants

More...
Gramenei
AT1G05570.1; AT1G05570.1; AT1G05570 [Q9AUE0-1]
AT1G05570.3; AT1G05570.3; AT1G05570 [Q9AUE0-1]
AT1G05570.4; AT1G05570.4; AT1G05570 [Q9AUE0-1]

KEGG: Kyoto Encyclopedia of Genes and Genomes

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KEGGi
ath:AT1G05570

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF237733 mRNA Translation: AAK37413.1
AC005106 Genomic DNA Translation: AAF79729.1 Sequence problems.
AC007153 Genomic DNA Translation: AAD30609.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE27855.1
CP002684 Genomic DNA Translation: ANM60178.1
CP002684 Genomic DNA Translation: ANM60179.1
AK228963 mRNA Translation: BAF00852.1
PIRiE86189
RefSeqiNP_001322482.1, NM_001331555.1 [Q9AUE0-1]
NP_001322483.1, NM_001331556.1 [Q9AUE0-1]
NP_563743.2, NM_100436.5 [Q9AUE0-1]

3D structure databases

SMRiQ9AUE0
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi22301, 1 interactor
IntActiQ9AUE0, 2 interactors
STRINGi3702.AT1G05570.1

Protein family/group databases

CAZyiGT48 Glycosyltransferase Family 48

PTM databases

iPTMnetiQ9AUE0

Proteomic databases

PaxDbiQ9AUE0
PRIDEiQ9AUE0

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G05570.1; AT1G05570.1; AT1G05570 [Q9AUE0-1]
AT1G05570.3; AT1G05570.3; AT1G05570 [Q9AUE0-1]
AT1G05570.4; AT1G05570.4; AT1G05570 [Q9AUE0-1]
GeneIDi837059
GrameneiAT1G05570.1; AT1G05570.1; AT1G05570 [Q9AUE0-1]
AT1G05570.3; AT1G05570.3; AT1G05570 [Q9AUE0-1]
AT1G05570.4; AT1G05570.4; AT1G05570 [Q9AUE0-1]
KEGGiath:AT1G05570

Organism-specific databases

AraportiAT1G05570
TAIRilocus:2031938 AT1G05570

Phylogenomic databases

eggNOGiKOG0916 Eukaryota
ENOG410XQ8V LUCA
HOGENOMiHOG000029513
InParanoidiQ9AUE0
KOiK11000
OrthoDBi48442at2759
PhylomeDBiQ9AUE0

Enzyme and pathway databases

BioCyciARA:AT1G05570-MONOMER

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q9AUE0

Gene expression databases

ExpressionAtlasiQ9AUE0 baseline and differential
GenevisibleiQ9AUE0 AT

Family and domain databases

Gene3Di1.25.40.270, 1 hit
InterProiView protein in InterPro
IPR026953 CALS
IPR026899 FKS1-like_dom1
IPR003440 Glyco_trans_48
IPR023175 VPS_Vta1/CALS_N
IPR039431 Vta1/CALS_N
PANTHERiPTHR12741:SF59 PTHR12741:SF59, 1 hit
PfamiView protein in Pfam
PF14288 FKS1_dom1, 1 hit
PF02364 Glucan_synthase, 2 hits
PF04652 Vta1, 1 hit
SMARTiView protein in SMART
SM01205 FKS1_dom1, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCALS1_ARATH
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9AUE0
Secondary accession number(s): Q0WPU7, Q9LR43, Q9SYJ7
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: May 20, 2008
Last modified: May 8, 2019
This is version 105 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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