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Entry version 147 (08 May 2019)
Sequence version 1 (01 Jun 2001)
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Protein

Transcriptional adapter ADA2b

Gene

ADA2B

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Required for the function of some acidic activation domains, which activate transcription from a distant site. The exact mechanism of action is not yet known (By similarity). ADA2 stimulates the acetyltransferase activity of GCN5 on free histones or nucleosomes, probably by opening up the promoter region. Mediates auxin and cytokinin signals in the control of cell proliferation and might be involved in repression of a freezing tolerance pathway at warm temperature (PubMed:12615937, PubMed:12747832). Involved in the positive regulation of salt-induced gene expression by maintaining locus-specific acetylation of histones H4 and H3 (PubMed:21193996).By similarity3 Publications

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section specifies the position(s) and type(s) of zinc fingers within the protein.<p><a href='/help/zn_fing' target='_top'>More...</a></p>Zinc fingeri41 – 88ZZ-typePROSITE-ProRule annotationAdd BLAST48

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

  • chromatin binding Source: GO_Central
  • DNA binding Source: UniProtKB-KW
  • transcription coactivator activity Source: TAIR
  • zinc ion binding Source: InterPro

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionDNA-binding
Biological processStress response, Transcription, Transcription regulation
LigandMetal-binding, Zinc

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Transcriptional adapter ADA2b
Short name:
AtADA2b
Alternative name(s):
Protein PROPORZ 1
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:ADA2B
Synonyms:PRZ1
Ordered Locus Names:At4g16420
ORF Names:dl4235c
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 4

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT4G16420

The Arabidopsis Information Resource

More...
TAIRi
locus:2130609 AT4G16420

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the ‘Pathology and Biotech’ section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

Plants have pleiotropic effects on plant growth and development, including dwarf size, aberrant root development, and short petals and stamens in flowers. ADA2a cannot rescue any of the mutant phenotypes.2 Publications

Mutagenesis

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/manual/pathology_and_biotech_section">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi216K → A or R: No phenotypic effect. 1 Publication1

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002697511 – 487Transcriptional adapter ADA2bAdd BLAST487

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei216N6-acetyllysine; by GCN51 Publication1

<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM/processing</a> section describes post-translational modifications (PTMs). This subsection <strong>complements</strong> the information provided at the sequence level or describes modifications for which <strong>position-specific data is not yet available</strong>.<p><a href='/help/post-translational_modification' target='_top'>More...</a></p>Post-translational modificationi

Acetylated in vitro by GCN5, but acetylation is not essential for biological activity.1 Publication

Keywords - PTMi

Acetylation

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9ATB4

PRoteomics IDEntifications database

More...
PRIDEi
Q9ATB4

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q9ATB4

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Expressed in roots, leaves, stems, flowers and siliques, with the strongest activity in the meristematic zones.2 Publications

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q9ATB4 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q9ATB4 AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts in vitro with the HAT domain of GCN5 and with the DNA-binding domain of the transcriptional activator DREB1B/CBF1 (PubMed:11266554, PubMed:16603259). Interacts with BZIP11 (PubMed:24861440).3 Publications

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

WithEntry#Exp.IntActNotes
HAG1Q9AR195EBI-979237,EBI-979271

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
12629, 7 interactors

Protein interaction database and analysis system

More...
IntActi
Q9ATB4, 2 interactors

STRING: functional protein association networks

More...
STRINGi
3702.AT4G16420.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q9ATB4

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini100 – 152SANTPROSITE-ProRule annotationAdd BLAST53
Domaini401 – 487SWIRMPROSITE-ProRule annotationAdd BLAST87

<p>This subsection of the ‘Family and domains’ section provides general information on the biological role of a domain. The term ‘domain’ is intended here in its wide acceptation, it may be a structural domain, a transmembrane region or a functional domain. Several domains are described in this subsection.<p><a href='/help/domain_cc' target='_top'>More...</a></p>Domaini

The middle domain of ADA2b is sufficient for interaction with the HAT catalytic domain of GCN5.

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri41 – 88ZZ-typePROSITE-ProRule annotationAdd BLAST48

Keywords - Domaini

Zinc-finger

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG0457 Eukaryota
COG5114 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000163455

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q9ATB4

KEGG Orthology (KO)

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KOi
K11314

Identification of Orthologs from Complete Genome Data

More...
OMAi
CHEYDLC

Database of Orthologous Groups

More...
OrthoDBi
812864at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q9ATB4

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00167 SANT, 1 hit
cd02335 ZZ_ADA2, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR041983 ADA2-like_ZZ
IPR016827 Ada2/TADA2
IPR034318 ADA2_plants
IPR009057 Homeobox-like_sf
IPR001005 SANT/Myb
IPR017884 SANT_dom
IPR007526 SWIRM
IPR000433 Znf_ZZ

The PANTHER Classification System

More...
PANTHERi
PTHR12374:SF52 PTHR12374:SF52, 1 hit

Pfam protein domain database

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Pfami
View protein in Pfam
PF00249 Myb_DNA-binding, 1 hit
PF00569 ZZ, 1 hit

PIRSF; a whole-protein classification database

More...
PIRSFi
PIRSF025024 Transcriptional_adaptor_2, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

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SMARTi
View protein in SMART
SM00717 SANT, 1 hit
SM00291 ZnF_ZZ, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF46689 SSF46689, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51293 SANT, 1 hit
PS50934 SWIRM, 1 hit
PS01357 ZF_ZZ_1, 1 hit
PS50135 ZF_ZZ_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 3 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: Q9ATB4-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MGRSRGNFQN FEDPTQRTRK KKNAANVENF ESTSLVPGAE GGGKYNCDYC
60 70 80 90 100
QKDITGKIRI KCAVCPDFDL CIECMSVGAE ITPHKCDHPY RVMGNLTFPL
110 120 130 140 150
ICPDWSADDE MLLLEGLEIY GLGNWAEVAE HVGTKSKEQC LEHYRNIYLN
160 170 180 190 200
SPFFPLPDMS HVAGKNRKEL QAMAKGRIDD KKAEQNMKEE YPFSPPKVKV
210 220 230 240 250
EDTQKESFVD RSFGGKKPVS TSVNNSLVEL SNYNQKREEF DPEYDNDAEQ
260 270 280 290 300
LLAEMEFKEN DTPEEHELKL RVLRIYSKRL DERKRRKEFI IERNLLYPNP
310 320 330 340 350
FEKDLSQEEK VQCRRLDVFM RFHSKEEHDE LLRNVVSEYR MVKRLKDLKE
360 370 380 390 400
AQVAGCRSTA EAERYLGRKR KRENEEGMNR GKESGQFGQI AGEMGSRPPV
410 420 430 440 450
QASSSYVNDL DLIGFTESQL LSESEKRLCS EVKLVPPVYL QMQQVMSHEI
460 470 480
FKGNVTKKSD AYSLFKIDPT KVDRVYDMLV KKGIAQL
Length:487
Mass (Da):56,186
Last modified:June 1, 2001 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i51914B5A31724CDC
GO
Isoform 2 (identifier: Q9ATB4-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     206-209: Missing.

Note: Derived from EST data. No experimental confirmation available.
Show »
Length:483
Mass (Da):55,723
Checksum:i1345D5FFC915CAF7
GO
Isoform 3 (identifier: Q9ATB4-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     183-183: Missing.

Note: Derived from EST data. No experimental confirmation available.
Show »
Length:486
Mass (Da):56,115
Checksum:i601194DE28A66019
GO

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence CAB10418 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence CAB78684 differs from that shown. Reason: Erroneous gene model prediction.Curated

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_022095183Missing in isoform 3. 1 Publication1
Alternative sequenceiVSP_022096206 – 209Missing in isoform 2. 1 Publication4

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AF338770 mRNA Translation: AAK31320.1
Z97341 Genomic DNA Translation: CAB10418.1 Sequence problems.
AL161544 Genomic DNA Translation: CAB78684.1 Sequence problems.
CP002687 Genomic DNA Translation: AEE83744.1
CP002687 Genomic DNA Translation: AEE83745.1
CP002687 Genomic DNA Translation: AEE83746.1
AY143911 mRNA Translation: AAN28850.1
AY050348 mRNA Translation: AAK91365.1
BX827435 mRNA No translation available.
BX827480 mRNA No translation available.

Protein sequence database of the Protein Information Resource

More...
PIRi
H71430

NCBI Reference Sequences

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RefSeqi
NP_567495.1, NM_117737.5 [Q9ATB4-1]
NP_974560.1, NM_202831.3 [Q9ATB4-2]
NP_974561.1, NM_202832.2 [Q9ATB4-3]

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT4G16420.1; AT4G16420.1; AT4G16420 [Q9ATB4-1]
AT4G16420.2; AT4G16420.2; AT4G16420 [Q9ATB4-2]
AT4G16420.3; AT4G16420.3; AT4G16420 [Q9ATB4-3]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
827336

Gramene; a comparative resource for plants

More...
Gramenei
AT4G16420.1; AT4G16420.1; AT4G16420 [Q9ATB4-1]
AT4G16420.2; AT4G16420.2; AT4G16420 [Q9ATB4-2]
AT4G16420.3; AT4G16420.3; AT4G16420 [Q9ATB4-3]

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT4G16420

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF338770 mRNA Translation: AAK31320.1
Z97341 Genomic DNA Translation: CAB10418.1 Sequence problems.
AL161544 Genomic DNA Translation: CAB78684.1 Sequence problems.
CP002687 Genomic DNA Translation: AEE83744.1
CP002687 Genomic DNA Translation: AEE83745.1
CP002687 Genomic DNA Translation: AEE83746.1
AY143911 mRNA Translation: AAN28850.1
AY050348 mRNA Translation: AAK91365.1
BX827435 mRNA No translation available.
BX827480 mRNA No translation available.
PIRiH71430
RefSeqiNP_567495.1, NM_117737.5 [Q9ATB4-1]
NP_974560.1, NM_202831.3 [Q9ATB4-2]
NP_974561.1, NM_202832.2 [Q9ATB4-3]

3D structure databases

SMRiQ9ATB4
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi12629, 7 interactors
IntActiQ9ATB4, 2 interactors
STRINGi3702.AT4G16420.1

PTM databases

iPTMnetiQ9ATB4

Proteomic databases

PaxDbiQ9ATB4
PRIDEiQ9ATB4

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G16420.1; AT4G16420.1; AT4G16420 [Q9ATB4-1]
AT4G16420.2; AT4G16420.2; AT4G16420 [Q9ATB4-2]
AT4G16420.3; AT4G16420.3; AT4G16420 [Q9ATB4-3]
GeneIDi827336
GrameneiAT4G16420.1; AT4G16420.1; AT4G16420 [Q9ATB4-1]
AT4G16420.2; AT4G16420.2; AT4G16420 [Q9ATB4-2]
AT4G16420.3; AT4G16420.3; AT4G16420 [Q9ATB4-3]
KEGGiath:AT4G16420

Organism-specific databases

AraportiAT4G16420
TAIRilocus:2130609 AT4G16420

Phylogenomic databases

eggNOGiKOG0457 Eukaryota
COG5114 LUCA
HOGENOMiHOG000163455
InParanoidiQ9ATB4
KOiK11314
OMAiCHEYDLC
OrthoDBi812864at2759
PhylomeDBiQ9ATB4

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q9ATB4

Gene expression databases

ExpressionAtlasiQ9ATB4 baseline and differential
GenevisibleiQ9ATB4 AT

Family and domain databases

CDDicd00167 SANT, 1 hit
cd02335 ZZ_ADA2, 1 hit
InterProiView protein in InterPro
IPR041983 ADA2-like_ZZ
IPR016827 Ada2/TADA2
IPR034318 ADA2_plants
IPR009057 Homeobox-like_sf
IPR001005 SANT/Myb
IPR017884 SANT_dom
IPR007526 SWIRM
IPR000433 Znf_ZZ
PANTHERiPTHR12374:SF52 PTHR12374:SF52, 1 hit
PfamiView protein in Pfam
PF00249 Myb_DNA-binding, 1 hit
PF00569 ZZ, 1 hit
PIRSFiPIRSF025024 Transcriptional_adaptor_2, 1 hit
SMARTiView protein in SMART
SM00717 SANT, 1 hit
SM00291 ZnF_ZZ, 1 hit
SUPFAMiSSF46689 SSF46689, 2 hits
PROSITEiView protein in PROSITE
PS51293 SANT, 1 hit
PS50934 SWIRM, 1 hit
PS01357 ZF_ZZ_1, 1 hit
PS50135 ZF_ZZ_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiTAD2B_ARATH
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9ATB4
Secondary accession number(s): O23486, Q3EA06, Q3EA07
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 9, 2007
Last sequence update: June 1, 2001
Last modified: May 8, 2019
This is version 147 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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