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Protein

ELKS/Rab6-interacting/CAST family member 1

Gene

Erc1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Regulatory subunit of the IKK complex. Probably recruits IkappaBalpha/NFKBIA to the complex (By similarity). May be involved in the organization of the cytomatrix at the nerve terminals active zone (CAZ) which regulates neurotransmitter release. May be involved in vesicle trafficking at the CAZ. May be involved in Rab-6 regulated endosomes to Golgi transport.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processProtein transport, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
ELKS/Rab6-interacting/CAST family member 1
Short name:
ERC-1
Alternative name(s):
CAZ-associated structural protein 2
Short name:
CAST2
Rab6-interacting protein 2
Gene namesi
Name:Erc1
Synonyms:Cast2, Kiaa1081, Rab6ip2
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 6

Organism-specific databases

MGIiMGI:2151013 Erc1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Golgi apparatus, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000971771 – 1120ELKS/Rab6-interacting/CAST family member 1Add BLAST1120

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei10N6-acetyllysineCombined sources1
Modified residuei17PhosphoserineBy similarity1
Modified residuei21PhosphoserineCombined sources1
Modified residuei37PhosphoserineBy similarity1
Modified residuei38PhosphothreonineBy similarity1
Modified residuei55PhosphoserineCombined sources1
Modified residuei75PhosphoserineCombined sources1
Modified residuei94PhosphoserineBy similarity1
Modified residuei824PhosphoserineCombined sources1
Modified residuei1009PhosphoserineBy similarity1
Modified residuei1050PhosphothreonineBy similarity1
Isoform 2 (identifier: Q99MI1-2)
Modified residuei965PhosphoserineCombined sources1

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

EPDiQ99MI1
PaxDbiQ99MI1
PeptideAtlasiQ99MI1
PRIDEiQ99MI1

PTM databases

iPTMnetiQ99MI1
PhosphoSitePlusiQ99MI1

Expressioni

Tissue specificityi

Widely expressed.1 Publication

Gene expression databases

BgeeiENSMUSG00000030172 Expressed in 255 organ(s), highest expression level in brain
CleanExiMM_ERC1
ExpressionAtlasiQ99MI1 baseline and differential
GenevisibleiQ99MI1 MM

Interactioni

Subunit structurei

Interacts with the GTB-bound forms of RAB6A isoform 1 and isoform 2 and with RAB6B. The interaction was strongest with RAB6B, followed by RAB6A isoform 2 and weakest with RAB6A isoform 1. Part of a complex with CHUK, IKBKB and IKBKG. Interacts with CHUK, IKBKB and IKBKG. The interaction with IKBKG is independent of CHUK and IKBKB. Interacts with NFKBIA (By similarity). Isoform 2 interacts through its C-terminus with the PDZ domains of RIMS1 and RIMS2. Interacts with ERC2/CAST1 (By similarity).By similarity

GO - Molecular functioni

Protein-protein interaction databases

BioGridi226265, 5 interactors
IntActiQ99MI1, 11 interactors
MINTiQ99MI1
STRINGi10090.ENSMUSP00000032279

Structurei

3D structure databases

ProteinModelPortaliQ99MI1
SMRiQ99MI1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1050 – 1112FIP-RBDPROSITE-ProRule annotationAdd BLAST63

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili144 – 992Sequence analysisAdd BLAST849
Coiled coili1060 – 1104Sequence analysisAdd BLAST45

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiKOG4809 Eukaryota
ENOG410Y4GU LUCA
GeneTreeiENSGT00650000093320
HOGENOMiHOG000236353
HOVERGENiHBG051496
InParanoidiQ99MI1
KOiK16072
PhylomeDBiQ99MI1

Family and domain databases

InterProiView protein in InterPro
IPR019323 ELKS/CAST
IPR037245 FIP-RBD_C_sf
IPR019018 Rab-bd_FIP-RBD
PfamiView protein in Pfam
PF10174 Cast, 3 hits
PF09457 RBD-FIP, 1 hit
SUPFAMiSSF144270 SSF144270, 1 hit
PROSITEiView protein in PROSITE
PS51511 FIP_RBD, 1 hit

Sequences (3+)i

Sequence statusi: Complete.

This entry describes 3 isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 3 described isoforms and 7 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q99MI1-1) [UniParc]FASTAAdd to basket
Also known as: B, beta

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MYGSARSVGK VEPSSQSPGR SPRLPRSPRL GHRRTNSTGG SSGNSVGGGS
60 70 80 90 100
GKTLSMENIQ SLNAAYATSG PMYLSDHENV GAETPKSTMT LGRSGGRLPY
110 120 130 140 150
GVRMTAMGSS PNIASSGVAS DTIAFGEHHL PPVSMASTVP HSLRQARDNT
160 170 180 190 200
IMDLQTQLKE VLRENDLLRK DVEVKESKLS SSMNSIKTFW SPELKKERAL
210 220 230 240 250
RKDEASKITI WKEQYRVVQE ENQHMQMTIQ ALQDELRIQR DLNQLFQQDS
260 270 280 290 300
SSRTGEPCVA ELTEENFQRL HAEHERQAKE LFLLRKTLEE MELRIETQKQ
310 320 330 340 350
TLNARDESIK KLLEMLQSKG LSAKATEEDH ERTRRLAEAE MHVHHLESLL
360 370 380 390 400
EQKEKENNML REEMHRRFEN APDSAKTKAL QTVIEMKDSK ISSMERGLRD
410 420 430 440 450
LEEEIQMLKS NGALSSEERE EEMKQMEVYR SHSKFMKNKV EQLKEELSSK
460 470 480 490 500
DAQGEELKKR AAGLQSEIGQ VKQELSRKDT ELLALQTKLE TLTNQFSDSK
510 520 530 540 550
QHIEVLKESL TAKEQRAAIL QTEVDALRLR LEEKETMLNK KTKQIQDMAE
560 570 580 590 600
EKGTQAGEIH DLKDMLDVKE RKVNVLQKKI ENLQEQLRDK EKQMSSLKER
610 620 630 640 650
VKSLQADTTN TDTALTTLEE ALADKERTIE RLKEQRDRDE REKQEEIDTY
660 670 680 690 700
KKDLKDLREK VSLLQGDLSE KEASLLDIKE HASSLASSGL KKDSRLKTLE
710 720 730 740 750
IALEQKKEEC LKMESQLKKA HEATLEARAS PEMSDRIQQL EREISRYKDE
760 770 780 790 800
SSKAQTEVDR LLEILKEVEN EKNDKDKKIA ELESLTSRQV KDQNKKVANL
810 820 830 840 850
KHKEQVEKKK SAQMLEEARR REDSLSDSSQ QLQDSLRKKD DRIEELEEAL
860 870 880 890 900
RESVQITAER EMVLAQEESA RTNAEKQVEE LLMAMEKVKQ ELESMKAKLS
910 920 930 940 950
STQQSLAEKE THLTNLRAER RKHLEEVLEM KQEALLAAIS EKDANIALLE
960 970 980 990 1000
LSSSKKKTQE EVAALKREKD RLVQQLKQQT QNRMKLMADN YEDDHFRSSR
1010 1020 1030 1040 1050
SNQTNHKPSP DQIIQPLLEL DQNRSKLKLY IGHLTALCHD RDPLILRGLT
1060 1070 1080 1090 1100
PPASYNADGE QAAWENELQQ MTQEQLQNEL EKVEGDNAEL QEFANTILQQ
1110 1120
IADHCPDILE QVVNALEESS
Length:1,120
Mass (Da):128,331
Last modified:June 1, 2001 - v1
Checksum:iA542B526FAEDF9C7
GO
Isoform 2 (identifier: Q99MI1-2) [UniParc]FASTAAdd to basket
Also known as: A

The sequence of this isoform differs from the canonical sequence as follows:
     834-877: Missing.
     1013-1020: IIQPLLEL → DEEEGIWA
     1021-1120: Missing.

Note: May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay.Combined sources
Show »
Length:976
Mass (Da):111,931
Checksum:i48731867C8D8CD6F
GO
Isoform 3 (identifier: Q99MI1-4) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-151: Missing.
     440-467: Missing.
     525-547: DALRLRLEEKETMLNKKTKQIQD → KSFCDLCRIQSIPSFILLYICYV
     548-1120: Missing.

Show »
Length:368
Mass (Da):43,425
Checksum:iA404016D6BD06F06
GO

Computationally mapped potential isoform sequencesi

There are 7 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F8VPM7F8VPM7_MOUSE
ELKS/Rab6-interacting/CAST family m...
Erc1
1,120Annotation score:
V9GXF0V9GXF0_MOUSE
ELKS/Rab6-interacting/CAST family m...
Erc1 Rab6ip2, mCG_131716
1,088Annotation score:
V9GXP8V9GXP8_MOUSE
ELKS/Rab6-interacting/CAST family m...
Erc1 Rab6ip2, mCG_131716
1,116Annotation score:
V9GXH3V9GXH3_MOUSE
ELKS/Rab6-interacting/CAST family m...
Erc1
992Annotation score:
V9GX53V9GX53_MOUSE
ELKS/Rab6-interacting/CAST family m...
Erc1
720Annotation score:
V9GWT6V9GWT6_MOUSE
ELKS/Rab6-interacting/CAST family m...
Erc1
948Annotation score:
V9GXL1V9GXL1_MOUSE
ELKS/Rab6-interacting/CAST family m...
Erc1
285Annotation score:

Sequence cautioni

The sequence BAC65719 differs from that shown. Artifact. Missing internal sequence that does not correspond to an exon-intron boundary.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti121D → G in BAC35542 (PubMed:16141072).Curated1
Sequence conflicti1070Q → K in BAC65719 (PubMed:12693553).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_0114561 – 151Missing in isoform 3. 1 PublicationAdd BLAST151
Alternative sequenceiVSP_011457440 – 467Missing in isoform 3. 1 PublicationAdd BLAST28
Alternative sequenceiVSP_011458525 – 547DALRL…KQIQD → KSFCDLCRIQSIPSFILLYI CYV in isoform 3. 1 PublicationAdd BLAST23
Alternative sequenceiVSP_011459548 – 1120Missing in isoform 3. 1 PublicationAdd BLAST573
Alternative sequenceiVSP_011460834 – 877Missing in isoform 2. 2 PublicationsAdd BLAST44
Alternative sequenceiVSP_0114621013 – 1020IIQPLLEL → DEEEGIWA in isoform 2. 2 Publications8
Alternative sequenceiVSP_0114631021 – 1120Missing in isoform 2. 2 PublicationsAdd BLAST100

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF340028 mRNA Translation: AAK26381.1
AF340029 mRNA Translation: AAK26382.1
AY316692 mRNA Translation: AAP83581.1
AK048990 mRNA Translation: BAC33505.1
AK053824 mRNA Translation: BAC35542.1
AK122437 Transcribed RNA Translation: BAC65719.1 Sequence problems.
CCDSiCCDS20476.1 [Q99MI1-4]
CCDS39611.1 [Q99MI1-1]
RefSeqiNP_835186.1, NM_178085.3 [Q99MI1-4]
UniGeneiMm.288860
Mm.446801

Genome annotation databases

EnsembliENSMUST00000079582; ENSMUSP00000078534; ENSMUSG00000030172 [Q99MI1-4]
ENSMUST00000184838; ENSMUSP00000139030; ENSMUSG00000030172 [Q99MI1-2]
GeneIDi111173
KEGGimmu:111173
UCSCiuc009dmn.1 mouse [Q99MI1-4]

Keywords - Coding sequence diversityi

Alternative splicing

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF340028 mRNA Translation: AAK26381.1
AF340029 mRNA Translation: AAK26382.1
AY316692 mRNA Translation: AAP83581.1
AK048990 mRNA Translation: BAC33505.1
AK053824 mRNA Translation: BAC35542.1
AK122437 Transcribed RNA Translation: BAC65719.1 Sequence problems.
CCDSiCCDS20476.1 [Q99MI1-4]
CCDS39611.1 [Q99MI1-1]
RefSeqiNP_835186.1, NM_178085.3 [Q99MI1-4]
UniGeneiMm.288860
Mm.446801

3D structure databases

ProteinModelPortaliQ99MI1
SMRiQ99MI1
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi226265, 5 interactors
IntActiQ99MI1, 11 interactors
MINTiQ99MI1
STRINGi10090.ENSMUSP00000032279

PTM databases

iPTMnetiQ99MI1
PhosphoSitePlusiQ99MI1

Proteomic databases

EPDiQ99MI1
PaxDbiQ99MI1
PeptideAtlasiQ99MI1
PRIDEiQ99MI1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000079582; ENSMUSP00000078534; ENSMUSG00000030172 [Q99MI1-4]
ENSMUST00000184838; ENSMUSP00000139030; ENSMUSG00000030172 [Q99MI1-2]
GeneIDi111173
KEGGimmu:111173
UCSCiuc009dmn.1 mouse [Q99MI1-4]

Organism-specific databases

CTDi23085
MGIiMGI:2151013 Erc1
RougeiSearch...

Phylogenomic databases

eggNOGiKOG4809 Eukaryota
ENOG410Y4GU LUCA
GeneTreeiENSGT00650000093320
HOGENOMiHOG000236353
HOVERGENiHBG051496
InParanoidiQ99MI1
KOiK16072
PhylomeDBiQ99MI1

Miscellaneous databases

ChiTaRSiErc1 mouse
PROiPR:Q99MI1
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000030172 Expressed in 255 organ(s), highest expression level in brain
CleanExiMM_ERC1
ExpressionAtlasiQ99MI1 baseline and differential
GenevisibleiQ99MI1 MM

Family and domain databases

InterProiView protein in InterPro
IPR019323 ELKS/CAST
IPR037245 FIP-RBD_C_sf
IPR019018 Rab-bd_FIP-RBD
PfamiView protein in Pfam
PF10174 Cast, 3 hits
PF09457 RBD-FIP, 1 hit
SUPFAMiSSF144270 SSF144270, 1 hit
PROSITEiView protein in PROSITE
PS51511 FIP_RBD, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRB6I2_MOUSE
AccessioniPrimary (citable) accession number: Q99MI1
Secondary accession number(s): Q80TK7
, Q8BPL1, Q8C7Y1, Q99MI2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 31, 2004
Last sequence update: June 1, 2001
Last modified: November 7, 2018
This is version 136 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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Main funding by: National Institutes of Health

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