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Entry version 163 (07 Oct 2020)
Sequence version 1 (01 Jun 2001)
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Protein

RNA-binding protein 10

Gene

Rbm10

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Not known. Binds to RNA homopolymers, with a preference for poly(G) and poly(U) and little for poly(A) (By similarity). May bind to specific miRNA hairpins (By similarity).By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section specifies the position(s) and type(s) of zinc fingers within the protein.<p><a href='/help/zn_fing' target='_top'>More...</a></p>Zinc fingeri212 – 242RanBP2-typePROSITE-ProRule annotationAdd BLAST31
Zinc fingeri759 – 784C2H2-type; atypicalPROSITE-ProRule annotationAdd BLAST26

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionRNA-binding
LigandMetal-binding, Zinc

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
RNA-binding protein 10Curated
Alternative name(s):
RNA-binding motif protein 10
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Rbm10Imported
Synonyms:Kiaa0122
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome X

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:2384310, Rbm10

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003450171 – 930RNA-binding protein 10Add BLAST930

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei61PhosphoserineBy similarity1
Modified residuei89PhosphoserineBy similarity1
Modified residuei383N6-acetyllysineBy similarity1
Modified residuei718PhosphoserineBy similarity1
Modified residuei723PhosphoserineBy similarity1
Modified residuei733PhosphoserineCombined sources1
Modified residuei736PhosphoserineCombined sources1
Modified residuei738PhosphoserineCombined sources1
Modified residuei781PhosphoserineBy similarity1
Modified residuei797PhosphoserineCombined sources1
Modified residuei845PhosphoserineBy similarity1
Modified residuei902Omega-N-methylarginineCombined sources1

Keywords - PTMi

Acetylation, Methylation, Phosphoprotein

Proteomic databases

jPOST - Japan Proteome Standard Repository/Database

More...
jPOSTi
Q99KG3

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q99KG3

PeptideAtlas

More...
PeptideAtlasi
Q99KG3

PRoteomics IDEntifications database

More...
PRIDEi
Q99KG3

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q99KG3

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q99KG3

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000031060, Expressed in metanephric S-shaped body and 284 other tissues

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q99KG3, MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Associates with the spliceosome.

Component of a large chromatin remodeling complex, at least composed of MYSM1, PCAF, RBM10 and KIF11/TRIP5 (By similarity).

By similarity

GO - Molecular functioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...
BioGRIDi
231785, 5 interactors

Protein interaction database and analysis system

More...
IntActi
Q99KG3, 1 interactor

Molecular INTeraction database

More...
MINTi
Q99KG3

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000111032

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
Q99KG3, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Biological Magnetic Resonance Data Bank

More...
BMRBi
Q99KG3

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q99KG3

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini129 – 209RRM 1PROSITE-ProRule annotationAdd BLAST81
Domaini300 – 384RRM 2PROSITE-ProRule annotationAdd BLAST85
Domaini858 – 904G-patchPROSITE-ProRule annotationAdd BLAST47

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi80 – 87Poly-Arg8
Compositional biasi113 – 125Poly-GluAdd BLAST13

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri212 – 242RanBP2-typePROSITE-ProRule annotationAdd BLAST31
Zinc fingeri759 – 784C2H2-type; atypicalPROSITE-ProRule annotationAdd BLAST26

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG0154, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000160369

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_010527_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q99KG3

KEGG Orthology (KO)

More...
KOi
K13094

Identification of Orthologs from Complete Genome Data

More...
OMAi
QYYTEYY

Database of Orthologous Groups

More...
OrthoDBi
786674at2759

TreeFam database of animal gene trees

More...
TreeFami
TF315789

Family and domain databases

Conserved Domains Database

More...
CDDi
cd16167, OCRE_RBM10, 1 hit
cd12754, RRM2_RBM10, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.30.70.330, 2 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR000467, G_patch_dom
IPR012677, Nucleotide-bd_a/b_plait_sf
IPR041591, OCRE
IPR035979, RBD_domain_sf
IPR033095, RBM10
IPR035618, RBM10_OCRE
IPR034992, RBM10_RRM2
IPR000504, RRM_dom
IPR013087, Znf_C2H2_type
IPR001876, Znf_RanBP2
IPR036443, Znf_RanBP2_sf

The PANTHER Classification System

More...
PANTHERi
PTHR13948:SF4, PTHR13948:SF4, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01585, G-patch, 1 hit
PF17780, OCRE, 1 hit
PF00076, RRM_1, 1 hit
PF00641, zf-RanBP, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00443, G_patch, 1 hit
SM00360, RRM, 2 hits
SM00547, ZnF_RBZ, 1 hit

Superfamily database of structural and functional annotation

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SUPFAMi
SSF54928, SSF54928, 2 hits
SSF90209, SSF90209, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50174, G_PATCH, 1 hit
PS50102, RRM, 2 hits
PS01358, ZF_RANBP2_1, 1 hit
PS50199, ZF_RANBP2_2, 1 hit
PS50157, ZINC_FINGER_C2H2_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 3 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform. This section is only present in reviewed entries, i.e. in UniProtKB/Swiss-Prot.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: Q99KG3-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MEYERRGGRG DRTGRYGATD RSQDDSGENR SRDHDYRDMD YRSYPREYGS
60 70 80 90 100
QEGKHEYDDS SEEQSAEDSY EASPGSETQR RRRRRHRHSP TGPPGFPRDG
110 120 130 140 150
DYRDQDYRTE QGEEEEEEDE EEEEEKASNI VMLRMLPQAA TEDDIRGQLQ
160 170 180 190 200
SHGVQAREVR LMRNKSSGQS RGFAFVEFSH LQDATRWMEA NQHSLNILGQ
210 220 230 240 250
KVSMHYSDPK PKINEDWLCN KCGVQNFKRR EKCFKCGVPK SEAEQKLPLG
260 270 280 290 300
TRLDQQALPL GGRELSQGLL PLPQPYQAQG VLTSQALSQG SEPSSENAND
310 320 330 340 350
TIILRNLNPH STMDSILGAL APYAVLSSSN VRVIKDKQTQ LNRGFAFIQL
360 370 380 390 400
STIVEAAQLL QILQALHPPL TIDGKTINVE FAKGSKRDMA SNEGSRINAA
410 420 430 440 450
SVASTAIAAA QWAISQASQG GESAWAAPEE PPVDYSYYQQ DEGYGSSQGT
460 470 480 490 500
DSLYAHGYLK NSKGPGMTGT KGDPAGTGPE ASLEAGADSV SLQAFSRAQP
510 520 530 540 550
GAAPGLYQQS AEGSSGQSTA TNSQSYTIIS PAVLKAELQS PTQPSSSAFP
560 570 580 590 600
PATSPTAPEA YSQYPVPDVS TYQYDETSGY YYDPQTGLYY DPNSQYYYNA
610 620 630 640 650
QSQQYLYWDG ERRTYIPALE QSADGHKDTG ASSKEGKEKK EKHKTKTAQQ
660 670 680 690 700
IAKDMERWAR SLNKQKENFK NSFQPISALR DDERRESATA DAGYAILEKK
710 720 730 740 750
GALAERQHTS MDLPKLASDD RPSPPRGLVA AYSGESDSEE EQERGGPERE
760 770 780 790 800
EKLTDWQKLA CLLCRRQFPS KEALIRHQQL SGLHKQNLEI HRRAHLSENE
810 820 830 840 850
LEALEKNDME QMKYRDRAAE RREKYGIPEP PEPKRRKYGG ISTASVDFEQ
860 870 880 890 900
PTRDGLGSDN IGSRMLQAMG WKEGSGLGRK KQGIVTPIEA QTRVRGSGLG
910 920 930
ARGSSYGVTS TESYKETLHK TMVTRFNEAQ
Length:930
Mass (Da):103,494
Last modified:June 1, 2001 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iE59A2AB20AF1C08C
GO
Isoform 2 (identifier: Q99KG3-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     68-144: Missing.

Show »
Length:853
Mass (Da):94,430
Checksum:iD936DA91736681FD
GO
Isoform 3 (identifier: Q99KG3-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     354-354: Missing.

Show »
Length:929
Mass (Da):103,394
Checksum:i78506A1D7A81C1B9
GO

<p>This subsection of the 'Sequence' section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence BAC65490 differs from that shown. Reason: Erroneous initiation. Extended N-terminus.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti188M → V in BAE26813 (PubMed:16141072).Curated1
Sequence conflicti355E → VR in BAC65490 (PubMed:12693553).Curated1
Sequence conflicti428P → H in BAE39715 (PubMed:16141072).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_03490568 – 144Missing in isoform 2. 2 PublicationsAdd BLAST77
Alternative sequenceiVSP_034906354Missing in isoform 3. 1 Publication1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
AK122208 Transcribed RNA Translation: BAC65490.3 Different initiation.
AK089105 mRNA Translation: BAC40753.1
AK145991 mRNA Translation: BAE26813.1
AK153736 mRNA Translation: BAE32161.1
AK167666 mRNA Translation: BAE39715.1
AL672073 Genomic DNA No translation available.
AL807240 Genomic DNA No translation available.
BC004674 mRNA Translation: AAH04674.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS40885.1 [Q99KG3-1]
CCDS53013.1 [Q99KG3-3]
CCDS53014.1 [Q99KG3-2]

NCBI Reference Sequences

More...
RefSeqi
NP_001161247.1, NM_001167775.1 [Q99KG3-3]
NP_001161248.1, NM_001167776.1 [Q99KG3-2]
NP_663602.1, NM_145627.2 [Q99KG3-1]
XP_006527681.1, XM_006527618.3

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000064911; ENSMUSP00000068188; ENSMUSG00000031060 [Q99KG3-1]
ENSMUST00000082089; ENSMUSP00000080738; ENSMUSG00000031060 [Q99KG3-2]
ENSMUST00000084383; ENSMUSP00000111031; ENSMUSG00000031060 [Q99KG3-2]
ENSMUST00000115374; ENSMUSP00000111032; ENSMUSG00000031060 [Q99KG3-1]
ENSMUST00000115375; ENSMUSP00000111033; ENSMUSG00000031060 [Q99KG3-3]
ENSMUST00000177738; ENSMUSP00000136209; ENSMUSG00000031060 [Q99KG3-3]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
236732

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:236732

UCSC genome browser

More...
UCSCi
uc009stf.2, mouse [Q99KG3-3]
uc009sth.2, mouse [Q99KG3-1]
uc009sti.2, mouse [Q99KG3-2]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK122208 Transcribed RNA Translation: BAC65490.3 Different initiation.
AK089105 mRNA Translation: BAC40753.1
AK145991 mRNA Translation: BAE26813.1
AK153736 mRNA Translation: BAE32161.1
AK167666 mRNA Translation: BAE39715.1
AL672073 Genomic DNA No translation available.
AL807240 Genomic DNA No translation available.
BC004674 mRNA Translation: AAH04674.1
CCDSiCCDS40885.1 [Q99KG3-1]
CCDS53013.1 [Q99KG3-3]
CCDS53014.1 [Q99KG3-2]
RefSeqiNP_001161247.1, NM_001167775.1 [Q99KG3-3]
NP_001161248.1, NM_001167776.1 [Q99KG3-2]
NP_663602.1, NM_145627.2 [Q99KG3-1]
XP_006527681.1, XM_006527618.3

3D structure databases

BMRBiQ99KG3
SMRiQ99KG3
ModBaseiSearch...

Protein-protein interaction databases

BioGRIDi231785, 5 interactors
IntActiQ99KG3, 1 interactor
MINTiQ99KG3
STRINGi10090.ENSMUSP00000111032

PTM databases

iPTMnetiQ99KG3
PhosphoSitePlusiQ99KG3

Proteomic databases

jPOSTiQ99KG3
PaxDbiQ99KG3
PeptideAtlasiQ99KG3
PRIDEiQ99KG3

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...
Antibodypediai
11142, 190 antibodies

Genome annotation databases

EnsembliENSMUST00000064911; ENSMUSP00000068188; ENSMUSG00000031060 [Q99KG3-1]
ENSMUST00000082089; ENSMUSP00000080738; ENSMUSG00000031060 [Q99KG3-2]
ENSMUST00000084383; ENSMUSP00000111031; ENSMUSG00000031060 [Q99KG3-2]
ENSMUST00000115374; ENSMUSP00000111032; ENSMUSG00000031060 [Q99KG3-1]
ENSMUST00000115375; ENSMUSP00000111033; ENSMUSG00000031060 [Q99KG3-3]
ENSMUST00000177738; ENSMUSP00000136209; ENSMUSG00000031060 [Q99KG3-3]
GeneIDi236732
KEGGimmu:236732
UCSCiuc009stf.2, mouse [Q99KG3-3]
uc009sth.2, mouse [Q99KG3-1]
uc009sti.2, mouse [Q99KG3-2]

Organism-specific databases

Comparative Toxicogenomics Database

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CTDi
8241
MGIiMGI:2384310, Rbm10

Rodent Unidentified Gene-Encoded large proteins database

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Rougei
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Phylogenomic databases

eggNOGiKOG0154, Eukaryota
GeneTreeiENSGT00940000160369
HOGENOMiCLU_010527_0_0_1
InParanoidiQ99KG3
KOiK13094
OMAiQYYTEYY
OrthoDBi786674at2759
TreeFamiTF315789

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

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BioGRID-ORCSi
236732, 3 hits in 19 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

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ChiTaRSi
Rbm10, mouse

Protein Ontology

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PROi
PR:Q99KG3
RNActiQ99KG3, protein

The Stanford Online Universal Resource for Clones and ESTs

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SOURCEi
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Gene expression databases

BgeeiENSMUSG00000031060, Expressed in metanephric S-shaped body and 284 other tissues
GenevisibleiQ99KG3, MM

Family and domain databases

CDDicd16167, OCRE_RBM10, 1 hit
cd12754, RRM2_RBM10, 1 hit
Gene3Di3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR000467, G_patch_dom
IPR012677, Nucleotide-bd_a/b_plait_sf
IPR041591, OCRE
IPR035979, RBD_domain_sf
IPR033095, RBM10
IPR035618, RBM10_OCRE
IPR034992, RBM10_RRM2
IPR000504, RRM_dom
IPR013087, Znf_C2H2_type
IPR001876, Znf_RanBP2
IPR036443, Znf_RanBP2_sf
PANTHERiPTHR13948:SF4, PTHR13948:SF4, 1 hit
PfamiView protein in Pfam
PF01585, G-patch, 1 hit
PF17780, OCRE, 1 hit
PF00076, RRM_1, 1 hit
PF00641, zf-RanBP, 1 hit
SMARTiView protein in SMART
SM00443, G_patch, 1 hit
SM00360, RRM, 2 hits
SM00547, ZnF_RBZ, 1 hit
SUPFAMiSSF54928, SSF54928, 2 hits
SSF90209, SSF90209, 1 hit
PROSITEiView protein in PROSITE
PS50174, G_PATCH, 1 hit
PS50102, RRM, 2 hits
PS01358, ZF_RANBP2_1, 1 hit
PS50199, ZF_RANBP2_2, 1 hit
PS50157, ZINC_FINGER_C2H2_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiRBM10_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q99KG3
Secondary accession number(s): Q3TIY0
, Q3U5B8, Q3UKI8, Q80U75, Q8BTP8
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 22, 2008
Last sequence update: June 1, 2001
Last modified: October 7, 2020
This is version 163 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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