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Protein

RNA-binding protein 43

Gene

Rbm43

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
RNA-binding protein 43
Alternative name(s):
RNA-binding motif protein 43
Gene namesi
Name:Rbm43
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:1918934 Rbm43

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002642481 – 343RNA-binding protein 43Add BLAST343

Proteomic databases

MaxQBiQ99J64
PaxDbiQ99J64
PeptideAtlasiQ99J64
PRIDEiQ99J64

PTM databases

PhosphoSitePlusiQ99J64

Expressioni

Gene expression databases

BgeeiENSMUSG00000036249
CleanExiMM_RBM43
GenevisibleiQ99J64 MM

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000099828

Structurei

3D structure databases

ProteinModelPortaliQ99J64
SMRiQ99J64
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini15 – 90RRMPROSITE-ProRule annotationAdd BLAST76

Phylogenomic databases

eggNOGiKOG4012 Eukaryota
ENOG4112541 LUCA
GeneTreeiENSGT00390000007352
HOGENOMiHOG000231959
HOVERGENiHBG080503
InParanoidiQ99J64
OMAiHIDIIGS
OrthoDBiEOG091G0CSW
PhylomeDBiQ99J64
TreeFamiTF335737

Family and domain databases

Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR034463 RBM43
IPR000504 RRM_dom
PANTHERiPTHR15225:SF8 PTHR15225:SF8, 1 hit
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit

Sequencei

Sequence statusi: Complete.

Q99J64-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASAWKVKDP TVAERTVVVS GLPVGLLKDQ LVKCYFQDEG GHVEEVIYPS
60 70 80 90 100
KSKGVAYIIF KEKKVAQDFI RQKKHPPGSE PRLTVSHFSE KVFNYVMAIL
110 120 130 140 150
DLSVFRTQIE LESLVVDLKK KIPTLNFSPL GPSGKISVQG SFLAIMKLKQ
160 170 180 190 200
ALISKAISPL ENNRKDAGER RNWNGENPRR ILQKRENSAS ILGTFVAEPA
210 220 230 240 250
GSPETLVLDT DIFLYLKHKC EFYHLTLSKY HVLCQERVDG DVTTICLQDA
260 270 280 290 300
QDGSCSGSVR HVKEFIEECA QEFHLELRKE LLVLEGMGDR EKRNIRQALE
310 320 330 340
ELGGRYPRVL TNVHSTHIDL IGPPSDTYLF KTQLMKSAGQ KVT
Length:343
Mass (Da):38,637
Last modified:June 1, 2001 - v1
Checksum:i1CCF5B9E21374B16
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK002739 mRNA Translation: BAC25004.1
BC003333 mRNA Translation: AAH03333.1
CCDSiCCDS16030.1
RefSeqiNP_001135453.1, NM_001141981.1
NP_001135454.1, NM_001141982.1
NP_084519.1, NM_030243.4
XP_006498403.1, XM_006498340.1
XP_006498404.1, XM_006498341.1
XP_006498405.1, XM_006498342.3
XP_006498406.1, XM_006498343.3
XP_006498407.1, XM_006498344.2
XP_006498408.1, XM_006498345.1
XP_011237487.1, XM_011239185.1
XP_011237489.1, XM_011239187.1
UniGeneiMm.28309

Genome annotation databases

EnsembliENSMUST00000102767; ENSMUSP00000099828; ENSMUSG00000036249
ENSMUST00000102768; ENSMUSP00000099829; ENSMUSG00000036249
ENSMUST00000165313; ENSMUSP00000126129; ENSMUSG00000036249
GeneIDi71684
KEGGimmu:71684
UCSCiuc008jqk.2 mouse

Similar proteinsi

Entry informationi

Entry nameiRBM43_MOUSE
AccessioniPrimary (citable) accession number: Q99J64
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: June 1, 2001
Last modified: February 28, 2018
This is version 124 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot

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