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Protein

DNA-directed RNA polymerase subunit L

Gene

rpoL

Organism
Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.

Catalytic activityi

Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionNucleotidyltransferase, Transferase
Biological processTranscription

Names & Taxonomyi

Protein namesi
Recommended name:
DNA-directed RNA polymerase subunit L (EC:2.7.7.6)
Gene namesi
Name:rpoL
Ordered Locus Names:SSO5577
OrganismiSulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Taxonomic identifieri273057 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
Proteomesi
  • UP000001974 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

DNA-directed RNA polymerase

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001493391 – 92DNA-directed RNA polymerase subunit LAdd BLAST92

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
rpoDP959892EBI-9022031,EBI-9022065

GO - Molecular functioni

Protein-protein interaction databases

DIPiDIP-60647N
IntActiQ980K0, 2 interactors
STRINGi273057.SSO5577

Structurei

Secondary structure

192
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

ProteinModelPortaliQ980K0
SMRiQ980K0
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ980K0

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiarCOG04111 Archaea
COG1761 LUCA
HOGENOMiHOG000179862
InParanoidiQ980K0
KOiK03056
OMAiAYTIEHP
OrthoDBiPOG093Z0K9I

Family and domain databases

Gene3Di3.30.1360.10, 1 hit
HAMAPiMF_00261 RNApol_arch_L, 1 hit
InterProiView protein in InterPro
IPR036603 RBP11-like
IPR009025 RBP11-like_dimer
IPR008193 RNA_pol_Rpb11_13-16kDa_CS
IPR022905 RNAP_L
PfamiView protein in Pfam
PF13656 RNA_pol_L_2, 1 hit
SUPFAMiSSF55257 SSF55257, 1 hit
PROSITEiView protein in PROSITE
PS01154 RNA_POL_L_13KD, 1 hit

Sequencei

Sequence statusi: Complete.

Q980K0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEIRILKSES NYLELEIEGE DHTLGNLIAG TLRRISGVSF ASYYQPHPLS
60 70 80 90
DKIIVKILTD GSITPKDALL KAIENIRGMT SHYIDEIKGL TK
Length:92
Mass (Da):10,285
Last modified:October 1, 2001 - v1
Checksum:iB8F3DDA07598088C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006641 Genomic DNA Translation: AAK40631.1
PIRiH90171
RefSeqiWP_009990580.1, NC_002754.1

Genome annotation databases

EnsemblBacteriaiAAK40631; AAK40631; SSO5577
GeneIDi27426588
KEGGisso:SSO5577
PATRICifig|273057.12.peg.286

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006641 Genomic DNA Translation: AAK40631.1
PIRiH90171
RefSeqiWP_009990580.1, NC_002754.1

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2PA8X-ray1.76L1-92[»]
2PMZX-ray3.40L/X1-92[»]
3HKZX-ray3.40L/V1-92[»]
ProteinModelPortaliQ980K0
SMRiQ980K0
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-60647N
IntActiQ980K0, 2 interactors
STRINGi273057.SSO5577

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK40631; AAK40631; SSO5577
GeneIDi27426588
KEGGisso:SSO5577
PATRICifig|273057.12.peg.286

Phylogenomic databases

eggNOGiarCOG04111 Archaea
COG1761 LUCA
HOGENOMiHOG000179862
InParanoidiQ980K0
KOiK03056
OMAiAYTIEHP
OrthoDBiPOG093Z0K9I

Miscellaneous databases

EvolutionaryTraceiQ980K0

Family and domain databases

Gene3Di3.30.1360.10, 1 hit
HAMAPiMF_00261 RNApol_arch_L, 1 hit
InterProiView protein in InterPro
IPR036603 RBP11-like
IPR009025 RBP11-like_dimer
IPR008193 RNA_pol_Rpb11_13-16kDa_CS
IPR022905 RNAP_L
PfamiView protein in Pfam
PF13656 RNA_pol_L_2, 1 hit
SUPFAMiSSF55257 SSF55257, 1 hit
PROSITEiView protein in PROSITE
PS01154 RNA_POL_L_13KD, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRPOL_SULSO
AccessioniPrimary (citable) accession number: Q980K0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 27, 2002
Last sequence update: October 1, 2001
Last modified: October 10, 2018
This is version 95 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
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Main funding by: National Institutes of Health

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