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UniProtKB - Q97YY0 (Q97YY0_SACS2)

Entry version 76 (16 Jan 2019)
Sequence version 1 (01 Oct 2001)
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Protein
Submitted name:

Uncharacterized protein

Gene

SSO1172

Organism
Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

View the complete GO annotation on QuickGO ...

GO - Biological processi

View the complete GO annotation on QuickGO ...

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...BioCyci		SSOL273057:G1FZF-1202-MONOMER

BRENDA Comprehensive Enzyme Information System

More...BRENDAi		3.2.1.1 6163

Protein family/group databases

Carbohydrate-Active enZymes

More...CAZyi		GH57 Glycoside Hydrolase Family 57

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:SSO1172Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSaccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri273057 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiArchaea › Crenarchaeota › Thermoprotei › Sulfolobales › Sulfolobaceae › Saccharolobus ›
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001974 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei876 – 897HelicalSequence analysisAdd BLAST22

GO - Cellular componenti

View the complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Membrane

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...STRINGi		273057.SSO1172

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

More...ProteinModelPortali		Q97YY0

Database of comparative protein structure models

More...ModBasei		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini348 – 425Glyco_hydro_57InterPro annotationAdd BLAST78
Domaini442 – 658Glyco_hydro_57InterPro annotationAdd BLAST217

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		arCOG03284 Archaea
COG1449 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		HOG000108312

Identification of Orthologs from Complete Genome Data

More...OMAi		LPWSNIT

Database of Orthologous Groups

More...OrthoDBi		935at2157

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR011330 Glyco_hydro/deAcase_b/a-brl
IPR004300 Glyco_hydro_57_N
IPR017002 Glyco_hydro_57_Saci1162_prd

Pfam protein domain database

More...Pfami		View protein in Pfam
PF03065 Glyco_hydro_57, 2 hits

PIRSF; a whole-protein classification database

More...PIRSFi		PIRSF032656 Glycosyl_Ohase_Saci_1162_prd, 1 hit

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF88713 SSF88713, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q97YY0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MIKIAILAMG NLPKTAKAFL TLFFLLSLIS CSFLIPTSQS ISVNFTVSSN 
        60         70         80         90        100
GMVSIYIGGI PWNNTVILHY GIENGPQQAW TNISNVVMKW NGQNFSATIG 
       110        120        130        140        150
PFANGTWIGW VFYDNTTGQW INYDNHPFWN WNLEVNPPNV GQTYATVLQN 
       160        170        180        190        200
GSILITAIGR APDQLDIHYG LTTGPQTGLP WGNITDELMT YNPLWGNYTI 
       210        220        230        240        250
IIGPFKPGQW VQWVYHDLTL NQWYHNTSGQ NFAIQDVYSF IQYINASYNR 
       260        270        280        290        300
YVYVEGQPVS VIIYLQNTIS QAINSSISIQ IAGKLYNISS TLKPGYNLLS 
       310        320        330        340        350
LTLDTSQIPQ GIYYPQLSIY VNNTLQRQAT LPQLYVLNTT GKKPLSLVIV 
       360        370        380        390        400
WNMHQPLYVA PNGSWEQPWV WLHTGQDFYW DGSLVGAYEL QALLIRQFNV 
       410        420        430        440        450
SVTIDFTPVL LYQWETILHE KNYSFTSNFG IIPNHDISAV NYTINLYRQL 
       460        470        480        490        500
INEGKVDVLT VPFYHPLQPL LLQDGYWSDV LAQIRMGENF THEVFGVWAN 
       510        520        530        540        550
GTWTPEMAFD MDLVGLYNES NISYTILDQQ AFLPYVTLVR GSLNPDQPFI 
       560        570        580        590        600
VENNLGQTII VLFRNTTLSN EFGFKFFSQS PQLTAQELIQ QLAEIYMNNP 
       610        620        630        640        650
GGVVTVALDG ENPLIFNPNT GPADLYAIYQ ALSEYQGQWL ITQTASEAIA 
       660        670        680        690        700
THKPYSVITN LLVNSWDLNL NYWNNGYLGK TEIWQNVSLA REYLVAYTAA 
       710        720        730        740        750
VGANISPLVY LPLNETPNST NLFDTLWNYL YVAEGSDWTW QTGPPAYGPL 
       760        770        780        790        800
WFKEQALLYT STIISEVKQQ FDLIKLQSVK LDGNNLKLGI YNGINTTVHL 
       810        820        830        840        850
LLVITNGKQE IQLPIILSQG QNNFKIKISN VSGQLQIALY SPISASQVGL 
       860        870        880        890        900
TLIPINSYGF LVAQYQVNLN KSTSSMGTYL LALVGILVVS AIIVIVMKRG 

HI
Length:902
Mass (Da):101,481
Last modified:October 1, 2001 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iA0E641524B90874A
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AE006641 Genomic DNA Translation: AAK41420.1

Protein sequence database of the Protein Information Resource

More...PIRi		E90270

NCBI Reference Sequences

More...RefSeqi		WP_009991569.1, NC_002754.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...EnsemblBacteriai		AAK41420; AAK41420; SSO1172

Database of genes from NCBI RefSeq genomes

More...GeneIDi		27427476

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		sso:SSO1172

Pathosystems Resource Integration Center (PATRIC)

More...PATRICi		fig|273057.12.peg.1165

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006641 Genomic DNA Translation: AAK41420.1
PIRiE90270
RefSeqiWP_009991569.1, NC_002754.1

3D structure databases

ProteinModelPortaliQ97YY0
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi273057.SSO1172

Protein family/group databases

CAZyiGH57 Glycoside Hydrolase Family 57

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK41420; AAK41420; SSO1172
GeneIDi27427476
KEGGisso:SSO1172
PATRICifig|273057.12.peg.1165

Phylogenomic databases

eggNOGiarCOG03284 Archaea
COG1449 LUCA
HOGENOMiHOG000108312
OMAiLPWSNIT
OrthoDBi935at2157

Enzyme and pathway databases

BioCyciSSOL273057:G1FZF-1202-MONOMER
BRENDAi3.2.1.1 6163

Family and domain databases

InterProiView protein in InterPro
IPR011330 Glyco_hydro/deAcase_b/a-brl
IPR004300 Glyco_hydro_57_N
IPR017002 Glyco_hydro_57_Saci1162_prd
PfamiView protein in Pfam
PF03065 Glyco_hydro_57, 2 hits
PIRSFiPIRSF032656 Glycosyl_Ohase_Saci_1162_prd, 1 hit
SUPFAMiSSF88713 SSF88713, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ97YY0_SACS2
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q97YY0
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2001
Last sequence update: October 1, 2001
Last modified: January 16, 2019
This is version 76 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health

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