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UniProtKB - Q97W02 (DPO4_SULSO)

Protein

DNA polymerase IV

Gene

dbh

Organism
Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. It is involved in translesional synthesis.

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>This subsection of the ‘Function’ section provides information relevant to cofactors. A cofactor is any non-protein substance required for a protein to be catalytically active. Some cofactors are inorganic, such as the metal atoms zinc, iron, and copper in various oxidation states. Others, such as most vitamins, are organic.<p><a href='/help/cofactor' target='_top'>More...</a></p>Cofactori

Mg2+Note: Binds 2 magnesium ions per subunit.

<p>This subsection of the ‘Function’ section describes biophysical and chemical properties, such as maximal absorption, kinetic parameters, pH dependence, redox potentials and temperature dependence.<p><a href='/help/biophysicochemical_properties' target='_top'>More...</a></p>Temperature dependencei

Highly active from 35 to 95 degrees Celsius. Thermostable.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Function’ section indicates at which position the protein binds a given metal ion. The nature of the metal is indicated in the ‘Description’ field.<p><a href='/help/metal' target='_top'>More...</a></p>Metal bindingi7Magnesium1
<p>This subsection describes interesting single amino acid sites on the sequence that are not defined in any other subsection. This subsection can be displayed in different sections (‘Function’, ‘PTM / Processing’, ‘Pathology and Biotech’) according to its content.<p><a href='/help/site' target='_top'>More...</a></p>Sitei12Substrate discrimination1
Metal bindingi105Magnesium1
<p>This subsection of the ‘Function’ section is used for enzymes and indicates the residues directly involved in catalysis.<p><a href='/help/act_site' target='_top'>More...</a></p>Active sitei1061

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

View the complete GO annotation on QuickGO ...

GO - Biological processi

  • DNA-dependent DNA replication Source: UniProtKB-UniRule
  • translesion synthesis Source: GO_Central
View the complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionDNA-binding, DNA-directed DNA polymerase, Mutator protein, Nucleotidyltransferase, Transferase
Biological processDNA damage, DNA repair, DNA replication
LigandMagnesium, Metal-binding

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...BioCyci		SSOL273057:G1FZF-2673-MONOMER

BRENDA Comprehensive Enzyme Information System

More...BRENDAi		2.7.7.7 6163

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
DNA polymerase IV (EC:2.7.7.7)
Short name:
Pol IV
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:dbh
Synonyms:dpo4
Ordered Locus Names:SSO2448
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri273057 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiArchaea › Crenarchaeota › Thermoprotei › Sulfolobales › Sulfolobaceae › Saccharolobus ›
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001974 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

GO - Cellular componenti

View the complete GO annotation on QuickGO ...

Keywords - Cellular componenti

Cytoplasm

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Mutagenesis

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/manual/pathology_and_biotech_section">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi105 – 106DE → AA: Loss of function. 1 Publication2
Mutagenesisi342 – 352Missing : Almost complete loss of interaction with PCNA. 1 PublicationAdd BLAST11

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00001739761 – 352DNA polymerase IVAdd BLAST352

Proteomic databases

PRoteomics IDEntifications database

More...PRIDEi		Q97W02

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Monomer. Interacts with the PCNA heterotrimer via PCNA1.1 Publication

Protein-protein interaction databases

Database of interacting proteins

More...DIPi		DIP-48855N

Protein interaction database and analysis system

More...IntActi		Q97W02, 1 interactor

STRING: functional protein association networks

More...STRINGi		273057.SSO2448

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

Secondary structure

1352
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

More...ProteinModelPortali		Q97W02

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		Q97W02

Database of comparative protein structure models

More...ModBasei		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

Miscellaneous databases

Relative evolutionary importance of amino acids within a protein sequence

More...EvolutionaryTracei		Q97W02

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini3 – 187UmuCAdd BLAST185

<p>This subsection of the ‘Family and domains’ section provides general information on the biological role of a domain. The term ‘domain’ is intended here in its wide acceptation, it may be a structural domain, a transmembrane region or a functional domain. Several domains are described in this subsection.<p><a href='/help/domain_cc' target='_top'>More...</a></p>Domaini

The catalytic core consists of fingers, palm and thumb subdomains, but the fingers and thumb subdomains are much smaller than in high-fidelity polymerases; residues from five sequence motifs of the Y-family cluster around an active site cleft that can accommodate DNA and nucleotide substrates with relaxed geometric constraints, with consequently higher rates of misincorporation and low processivity.

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the DNA polymerase type-Y family.Curated

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		arCOG04582 Archaea
COG0389 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		HOG000082707

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		Q97W02

KEGG Orthology (KO)

More...KOi		K04479

Identification of Orthologs from Complete Genome Data

More...OMAi		DMQSFYA

Database of Orthologous Groups

More...OrthoDBi		POG093Z0779

Family and domain databases

Conserved Domains Database

More...CDDi		cd03586 PolY_Pol_IV_kappa, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		3.30.1490.100, 1 hit

HAMAP database of protein families

More...HAMAPi		MF_01113 DNApol_IV, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR036775 DNA_pol_Y-fam_lit_finger_sf
IPR017961 DNA_pol_Y-fam_little_finger
IPR022880 DNApol_IV
IPR024728 PolY_HhH_motif
IPR001126 UmuC

Pfam protein domain database

More...Pfami		View protein in Pfam
PF00817 IMS, 1 hit
PF11799 IMS_C, 1 hit
PF11798 IMS_HHH, 1 hit

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF100879 SSF100879, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS50173 UMUC, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q97W02-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MIVLFVDFDY FYAQVEEVLN PSLKGKPVVV CVFSGRFEDS GAVATANYEA 
        60         70         80         90        100
RKFGVKAGIP IVEAKKILPN AVYLPMRKEV YQQVSSRIMN LLREYSEKIE 
       110        120        130        140        150
IASIDEAYLD ISDKVRDYRE AYNLGLEIKN KILEKEKITV TVGISKNKVF 
       160        170        180        190        200
AKIAADMAKP NGIKVIDDEE VKRLIRELDI ADVPGIGNIT AEKLKKLGIN 
       210        220        230        240        250
KLVDTLSIEF DKLKGMIGEA KAKYLISLAR DEYNEPIRTR VRKSIGRIVT 
       260        270        280        290        300
MKRNSRNLEE IKPYLFRAIE ESYYKLDKRI PKAIHVVAVT EDLDIVSRGR 
       310        320        330        340        350
TFPHGISKET AYSESVKLLQ KILEEDERKI RRIGVRFSKF IEAIGLDKFF 

DT
Length:352
Mass (Da):40,193
Last modified:October 1, 2001 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iC0B0AD4B3A3E87D0
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AE006641 Genomic DNA Translation: AAK42588.1

Protein sequence database of the Protein Information Resource

More...PIRi		E90416

NCBI Reference Sequences

More...RefSeqi		WP_009993137.1, NC_002754.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...EnsemblBacteriai		AAK42588; AAK42588; SSO2448

Database of genes from NCBI RefSeq genomes

More...GeneIDi		27428748

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		sso:SSO2448

Pathosystems Resource Integration Center (PATRIC)

More...PATRICi		fig|273057.12.peg.2526

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006641 Genomic DNA Translation: AAK42588.1
PIRiE90416
RefSeqiWP_009993137.1, NC_002754.1

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...PDBei

Protein Data Bank RCSB

More...RCSB PDBi

Protein Data Bank Japan

More...PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1JX4X-ray1.70A1-352[»]
1JXLX-ray2.10A1-352[»]
1N48X-ray2.20A1-352[»]
1N56X-ray2.40A/B1-352[»]
1RYRX-ray2.28A1-352[»]
1RYSX-ray2.03A/B1-352[»]
1S0MX-ray2.70A/B1-352[»]
1S0NX-ray2.80A1-352[»]
1S0OX-ray2.10A/B1-352[»]
1S10X-ray2.10A1-352[»]
1S97X-ray2.40A/B/C/D1-352[»]
1S9FX-ray2.00A/B/C/D1-352[»]
2AGOX-ray2.85A1-341[»]
2AGPX-ray2.90A/B1-341[»]
2AGQX-ray2.10A1-341[»]
2ASDX-ray1.95A/B2-352[»]
2ASJX-ray2.35A/B2-352[»]
2ASLX-ray2.65A/B2-352[»]
2ATLX-ray2.80A/B2-352[»]
2AU0X-ray2.70A/B2-352[»]
2BQ3X-ray2.00A1-352[»]
2BQRX-ray2.37A1-352[»]
2BQUX-ray2.50A1-352[»]
2BR0X-ray2.17A1-352[»]
2C22X-ray2.56A1-352[»]
2C28X-ray2.27A1-352[»]
2C2DX-ray2.57A1-352[»]
2C2EX-ray2.61A1-352[»]
2C2RX-ray2.55A1-352[»]
2IA6X-ray2.50A/B1-352[»]
2IBKX-ray2.25A1-352[»]
2IMWX-ray2.05P1-348[»]
2J6SX-ray2.50A1-352[»]
2J6TX-ray2.60A1-352[»]
2J6UX-ray2.50A1-352[»]
2JEFX-ray2.17A1-352[»]
2JEGX-ray2.38A1-352[»]
2JEIX-ray2.39A1-352[»]
2JEJX-ray1.86A1-352[»]
2R8GX-ray2.70A1-352[»]
2R8HX-ray2.48A1-352[»]
2R8IX-ray2.38A1-352[»]
2RDIX-ray1.92A1-341[»]
2RDJX-ray2.20A/B1-352[»]
2UVRX-ray2.90A1-352[»]
2UVUX-ray2.70A1-352[»]
2UVVX-ray2.20A1-352[»]
2UVWX-ray2.09A1-352[»]
2V4QX-ray2.60A1-352[»]
2V4RX-ray2.50A1-352[»]
2V9WX-ray3.00A/B1-352[»]
2VA2X-ray2.80A/B1-352[»]
2VA3X-ray2.98A1-352[»]
2W8KX-ray3.10A1-352[»]
2W8LX-ray3.00A1-352[»]
2W9AX-ray2.60A1-352[»]
2W9BX-ray2.28A/B1-352[»]
2W9CX-ray2.87A/B1-352[»]
2XC9X-ray2.20A1-352[»]
2XCAX-ray2.50A1-352[»]
2XCPX-ray2.60A/B1-352[»]
3FDSX-ray2.05A1-352[»]
3GIIX-ray2.60A2-341[»]
3GIJX-ray2.40A/B2-341[»]
3GIKX-ray2.90A2-341[»]
3GILX-ray2.71A/B2-341[»]
3GIMX-ray2.70A2-341[»]
3KHGX-ray2.96A/B2-341[»]
3KHHX-ray2.70A/B2-341[»]
3KHLX-ray2.10A/B2-341[»]
3KHRX-ray2.01A/B2-341[»]
3M9MX-ray2.90B1-352[»]
3M9NX-ray1.93B1-352[»]
3M9OX-ray2.00B1-352[»]
3PR4X-ray2.65A1-341[»]
3PR5X-ray2.40B1-341[»]
3PVXX-ray3.03A1-341[»]
3PW0X-ray2.91A1-341[»]
3PW2X-ray2.74A1-341[»]
3PW4X-ray2.90A1-341[»]
3PW5X-ray3.00A1-341[»]
3PW7X-ray2.90A/E1-341[»]
3QZ7X-ray2.00A1-352[»]
3QZ8X-ray2.00A1-352[»]
3RAQX-ray2.25A/B2-341[»]
3RAXX-ray1.89A/B2-341[»]
3RB0X-ray3.22A/B2-341[»]
3RB3X-ray2.80A2-341[»]
3RB4X-ray2.80A/B2-341[»]
3RB6X-ray2.70A/B2-341[»]
3RBDX-ray2.50A/B2-341[»]
3RBEX-ray2.80A/B2-341[»]
3T5HX-ray2.35A1-341[»]
3T5JX-ray2.40A1-341[»]
3T5KX-ray2.90A1-341[»]
3T5LX-ray2.90A1-341[»]
3V6HX-ray2.30A/B1-342[»]
3V6JX-ray2.30A/J1-342[»]
3V6KX-ray3.60A/J1-342[»]
4F4WX-ray1.90A/B231-352[»]
4F4XX-ray2.05A231-352[»]
4F4YX-ray2.34A/B5-143[»]
A/B231-247[»]
4F4ZX-ray2.30A/B1-246[»]
4F50X-ray2.22A246-352[»]
4FBTX-ray2.00A1-341[»]
4FBUX-ray2.60A/B1-341[»]
4G3IX-ray2.50A/B1-341[»]
4GC6X-ray2.90A1-352[»]
4GC7X-ray2.89A/B1-352[»]
4JUZX-ray2.65A1-341[»]
4JV0X-ray2.95A1-341[»]
4JV1X-ray2.30A1-341[»]
4JV2X-ray2.74A1-341[»]
4QW8X-ray2.29A1-341[»]
4QW9X-ray2.40A1-341[»]
4QWAX-ray2.20A1-341[»]
4QWBX-ray1.80A1-343[»]
4QWCX-ray2.40A/D1-342[»]
4QWDX-ray2.05A1-341[»]
4QWEX-ray2.20A1-341[»]
4RUAX-ray3.07A1-341[»]
4RUCX-ray2.90A1-341[»]
4RZRX-ray2.20A/D1-352[»]
4TQRX-ray1.58A1-342[»]
4TQSX-ray2.06A/B1-352[»]
5EDWX-ray2.62A1-341[»]
ProteinModelPortaliQ97W02
SMRiQ97W02
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-48855N
IntActiQ97W02, 1 interactor
STRINGi273057.SSO2448

Proteomic databases

PRIDEiQ97W02

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK42588; AAK42588; SSO2448
GeneIDi27428748
KEGGisso:SSO2448
PATRICifig|273057.12.peg.2526

Phylogenomic databases

eggNOGiarCOG04582 Archaea
COG0389 LUCA
HOGENOMiHOG000082707
InParanoidiQ97W02
KOiK04479
OMAiDMQSFYA
OrthoDBiPOG093Z0779

Enzyme and pathway databases

BioCyciSSOL273057:G1FZF-2673-MONOMER
BRENDAi2.7.7.7 6163

Miscellaneous databases

EvolutionaryTraceiQ97W02

Family and domain databases

CDDicd03586 PolY_Pol_IV_kappa, 1 hit
Gene3Di3.30.1490.100, 1 hit
HAMAPiMF_01113 DNApol_IV, 1 hit
InterProiView protein in InterPro
IPR036775 DNA_pol_Y-fam_lit_finger_sf
IPR017961 DNA_pol_Y-fam_little_finger
IPR022880 DNApol_IV
IPR024728 PolY_HhH_motif
IPR001126 UmuC
PfamiView protein in Pfam
PF00817 IMS, 1 hit
PF11799 IMS_C, 1 hit
PF11798 IMS_HHH, 1 hit
SUPFAMiSSF100879 SSF100879, 1 hit
PROSITEiView protein in PROSITE
PS50173 UMUC, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiDPO4_SULSO
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q97W02
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 2, 2002
Last sequence update: October 1, 2001
Last modified: December 5, 2018
This is version 138 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families
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