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UniProtKB - Q96MV1 (TLCD4_HUMAN)

Entry version 124 (07 Apr 2021)
Sequence version 1 (01 Dec 2001)
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Protein

TLC domain-containing protein 4

Gene

TLCD4

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

  • lipid homeostasis Source: GO_Central
Complete GO annotation on QuickGO ...

Enzyme and pathway databases

Pathway Commons web resource for biological pathway data

More...PathwayCommonsi		Q96MV1

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
TLC domain-containing protein 4Curated
Alternative name(s):
Transmembrane protein 56
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:TLCD4Imported
Synonyms:TMEM56
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 1

Organism-specific databases

Human Gene Nomenclature Database

More...HGNCi		HGNC:26477, TLCD4

neXtProt; the human protein knowledge platform

More...neXtProti		NX_Q96MV1

Eukaryotic Pathogen, Vector and Host Database Resources

More...VEuPathDBi		HostDB:ENSG00000152078.9

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei7 – 27HelicalSequence analysisAdd BLAST21
Transmembranei53 – 73HelicalSequence analysisAdd BLAST21
Transmembranei90 – 110HelicalSequence analysisAdd BLAST21
Transmembranei124 – 144HelicalSequence analysisAdd BLAST21
Transmembranei173 – 193HelicalSequence analysisAdd BLAST21
Transmembranei211 – 231HelicalSequence analysisAdd BLAST21

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Membrane

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

DisGeNET

More...DisGeNETi		148534

Open Targets

More...OpenTargetsi		ENSG00000152078

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...PharmGKBi		PA142670772

Miscellaneous databases

Pharos NIH Druggable Genome Knowledgebase

More...Pharosi		Q96MV1, Tdark

Genetic variation databases

BioMuta curated single-nucleotide variation and disease association database

More...BioMutai		TMEM56

Domain mapping of disease mutations (DMDM)

More...DMDMi		74732443

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002867011 – 263TLC domain-containing protein 4Add BLAST263

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei165N6-acetyllysineCombined sources1

Keywords - PTMi

Acetylation

Proteomic databases

jPOST - Japan Proteome Standard Repository/Database

More...jPOSTi		Q96MV1

MassIVE - Mass Spectrometry Interactive Virtual Environment

More...MassIVEi		Q96MV1

MaxQB - The MaxQuant DataBase

More...MaxQBi		Q96MV1

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		Q96MV1

PeptideAtlas

More...PeptideAtlasi		Q96MV1

PRoteomics IDEntifications database

More...PRIDEi		Q96MV1

ProteomicsDB: a multi-organism proteome resource

More...ProteomicsDBi		77418

PTM databases

CarbonylDB database of protein carbonylation sites

More...CarbonylDBi		Q96MV1

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		Q96MV1

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...PhosphoSitePlusi		Q96MV1

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSG00000152078, Expressed in pigmented layer of retina and 196 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...ExpressionAtlasi		Q96MV1, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		Q96MV1, HS

Organism-specific databases

Human Protein Atlas

More...HPAi		ENSG00000152078, Tissue enhanced (liver)

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction%5Fsection">Interaction</a>' section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="https://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated at every <a href="http://www.uniprot.org/help/synchronization">UniProt release</a>.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Q96MV1
With#Exp.IntAct
ADGRB3 [O60242]3EBI-12947623,EBI-2682765
ADGRE2 [Q9UHX3]3EBI-12947623,EBI-11277970
ARV1 [Q9H2C2]3EBI-12947623,EBI-11724186
ATP13A1 - isoform C [Q9HD20-3]3EBI-12947623,EBI-12069500
BNIP3 [Q12983]3EBI-12947623,EBI-749464
CACNG1 [Q06432]3EBI-12947623,EBI-9686780
CCDC167 [Q9P0B6]3EBI-12947623,EBI-9083477
CDIPT [O14735]3EBI-12947623,EBI-358858
CHPT1 [Q8WUD6]3EBI-12947623,EBI-11337856
CLCN7 [P51798]3EBI-12947623,EBI-4402346
CLEC7A - isoform 6 [Q9BXN2-6]3EBI-12947623,EBI-11989440
CMTM5 - isoform 2 [Q96DZ9-2]3EBI-12947623,EBI-11522780
COMT [P21964]3EBI-12947623,EBI-372265
CTXN3 [Q4LDR2]3EBI-12947623,EBI-12019274
CXCL16 [A0A6I8PIU0]3EBI-12947623,EBI-10176529
CYP4F2 [P78329]3EBI-12947623,EBI-1752413
CYP4F22 [Q6NT55]3EBI-12947623,EBI-17509525
DHRSX [Q8N5I4]3EBI-12947623,EBI-3923585
EBP [Q15125]3EBI-12947623,EBI-3915253
EMC6 [Q9BV81]3EBI-12947623,EBI-2820492
EMP1 [P54849]3EBI-12947623,EBI-4319440
ERG28 [Q9UKR5]3EBI-12947623,EBI-711490
FA2H [Q7L5A8]3EBI-12947623,EBI-11337888
FDFT1 [P37268]3EBI-12947623,EBI-714550
FXYD6 [Q9H0Q3]3EBI-12947623,EBI-713304
GJB2 [P29033]3EBI-12947623,EBI-3905204
GOSR2 [O14653]3EBI-12947623,EBI-4401517
GYPA [P02724]3EBI-12947623,EBI-702665
HMOX1 [P09601]3EBI-12947623,EBI-2806151
IGFBP5 [P24593]3EBI-12947623,EBI-720480
KRT1 [P04264]3EBI-12947623,EBI-298429
LNPEP - isoform 2 [Q9UIQ6-2]3EBI-12947623,EBI-12133176
MS4A13 [Q5J8X5]3EBI-12947623,EBI-12070086
MYG1 [Q9HB07]3EBI-12947623,EBI-709754
NAT8 [Q9UHE5]3EBI-12947623,EBI-2863634
NDUFA3 [O95167]3EBI-12947623,EBI-1246131
NINJ1 [Q92982]3EBI-12947623,EBI-2802124
NKG7 [Q16617]3EBI-12947623,EBI-3919611
ORMDL1 [Q9P0S3]3EBI-12947623,EBI-1054848
PMP22 [Q01453]3EBI-12947623,EBI-2845982
PRAF2 [O60831]3EBI-12947623,EBI-2506064
PRRT2 [Q7Z6L0]3EBI-12947623,EBI-722696
REEP6 - isoform 2 [Q96HR9-2]3EBI-12947623,EBI-14065960
SCAMP5 [Q8TAC9]3EBI-12947623,EBI-2695784
SCD [O00767]3EBI-12947623,EBI-2684237
SEC22A [Q96IW7]3EBI-12947623,EBI-8652744
SEC22B [O75396]3EBI-12947623,EBI-1058865
SERP1 [Q9Y6X1]3EBI-12947623,EBI-10329948
SFXN1 [Q9H9B4]3EBI-12947623,EBI-355861
SFXN3 [A0A1P0AYU5]3EBI-12947623,EBI-14193895
SLC22A18 [Q96BI1]3EBI-12947623,EBI-11721845
SLC41A1 [Q8IVJ1]3EBI-12947623,EBI-12266234
SMAGP [Q0VAQ4]3EBI-12947623,EBI-10226799
STATH [P02808]3EBI-12947623,EBI-738687
STX12 [Q86Y82]3EBI-12947623,EBI-2691717
SYNDIG1 [Q9H7V2]3EBI-12947623,EBI-726331
SYNJ2BP [P57105]3EBI-12947623,EBI-1049004
TIMM23 [O14925]3EBI-12947623,EBI-1047996
TMEM115 [Q12893]3EBI-12947623,EBI-8633987
TMEM120B [A0PK00]3EBI-12947623,EBI-10171534
TMEM19 [Q96HH6]3EBI-12947623,EBI-741829
TMEM229B [Q8NBD8]3EBI-12947623,EBI-12195227
TMEM237 - isoform 2 [Q96Q45-2]3EBI-12947623,EBI-10982110
TMEM60 [Q9H2L4]3EBI-12947623,EBI-2852148
TVP23B [Q9NYZ1]3EBI-12947623,EBI-11343401
UBE2J1 [Q9Y385]3EBI-12947623,EBI-988826
YIPF1 [Q9Y548]3EBI-12947623,EBI-7850136
YIPF4 [Q9BSR8]3EBI-12947623,EBI-751253

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...BioGRIDi		127154, 90 interactors

Protein interaction database and analysis system

More...IntActi		Q96MV1, 82 interactors

STRING: functional protein association networks

More...STRINGi		9606.ENSP00000359222

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...RNActi		Q96MV1, protein

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini44 – 246TLCPROSITE-ProRule annotationAdd BLAST203

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the TLCD4 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG4561, Eukaryota

Ensembl GeneTree

More...GeneTreei		ENSGT01010000222313

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_034597_2_0_1

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		Q96MV1

Identification of Orthologs from Complete Genome Data

More...OMAi		AVMPVYY

Database of Orthologous Groups

More...OrthoDBi		1354968at2759

Database for complete collections of gene phylogenies

More...PhylomeDBi		Q96MV1

TreeFam database of animal gene trees

More...TreeFami		TF324847

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR006634, TLC-dom

Pfam protein domain database

More...Pfami		View protein in Pfam
PF03798, TRAM_LAG1_CLN8, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM00724, TLC, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS50922, TLC, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

Q96MV1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEINTKLLIS VTCISFFTFQ LLFYFVSYWF SAKVSPGFNS LSFKKKIEWN 
        60         70         80         90        100
SRVVSTCHSL VVGIFGLYIF LFDEATKADP LWGGPSLANV NIAIASGYLI 
       110        120        130        140        150
SDLSIIILYW KVIGDKFFIM HHCASLYAYY LVLKNGVLAY IGNFRLLAEL 
       160        170        180        190        200
SSPFVNQRWF FEALKYPKFS KAIVINGILM TVVFFIVRIA SMLPHYGFMY 
       210        220        230        240        250
SVYGTEPYIR LGVLIQLSWV ISCVVLDVMN VMWMIKISKG CIKVISHIRQ 
       260 
EKAKNSLQNG KLD
Length:263
Mass (Da):30,041
Last modified:December 1, 2001 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i51480330FACC8ABF
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
C9J6J2C9J6J2_HUMAN
TLC domain-containing protein 4
TLCD4
143Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
C9JJM2C9JJM2_HUMAN
TLC domain-containing protein 4
TLCD4
154Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AK056404 mRNA Translation: BAB71177.1
CH471097 Genomic DNA Translation: EAW73024.1
CH471097 Genomic DNA Translation: EAW73025.1
BC137457 mRNA Translation: AAI37458.1
BC137458 mRNA Translation: AAI37459.1
BC139737 mRNA Translation: AAI39738.1

The Consensus CDS (CCDS) project

More...CCDSi		CCDS753.1

NCBI Reference Sequences

More...RefSeqi		NP_001186608.1, NM_001199679.1
NP_689700.1, NM_152487.2

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENST00000370203; ENSP00000359222; ENSG00000152078

Database of genes from NCBI RefSeq genomes

More...GeneIDi		148534

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		hsa:148534

UCSC genome browser

More...UCSCi		uc001drb.4, human

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK056404 mRNA Translation: BAB71177.1
CH471097 Genomic DNA Translation: EAW73024.1
CH471097 Genomic DNA Translation: EAW73025.1
BC137457 mRNA Translation: AAI37458.1
BC137458 mRNA Translation: AAI37459.1
BC139737 mRNA Translation: AAI39738.1
CCDSiCCDS753.1
RefSeqiNP_001186608.1, NM_001199679.1
NP_689700.1, NM_152487.2

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Protein-protein interaction databases

BioGRIDi127154, 90 interactors
IntActiQ96MV1, 82 interactors
STRINGi9606.ENSP00000359222

PTM databases

CarbonylDBiQ96MV1
iPTMnetiQ96MV1
PhosphoSitePlusiQ96MV1

Genetic variation databases

BioMutaiTMEM56
DMDMi74732443

Proteomic databases

jPOSTiQ96MV1
MassIVEiQ96MV1
MaxQBiQ96MV1
PaxDbiQ96MV1
PeptideAtlasiQ96MV1
PRIDEiQ96MV1
ProteomicsDBi77418

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...Antibodypediai		71812, 49 antibodies

Genome annotation databases

EnsembliENST00000370203; ENSP00000359222; ENSG00000152078
GeneIDi148534
KEGGihsa:148534
UCSCiuc001drb.4, human

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		148534
DisGeNETi148534

GeneCards: human genes, protein and diseases

More...GeneCardsi		TLCD4
HGNCiHGNC:26477, TLCD4
HPAiENSG00000152078, Tissue enhanced (liver)
neXtProtiNX_Q96MV1
OpenTargetsiENSG00000152078
PharmGKBiPA142670772
VEuPathDBiHostDB:ENSG00000152078.9

GenAtlas: human gene database

More...GenAtlasi		Search...

Phylogenomic databases

eggNOGiKOG4561, Eukaryota
GeneTreeiENSGT01010000222313
HOGENOMiCLU_034597_2_0_1
InParanoidiQ96MV1
OMAiAVMPVYY
OrthoDBi1354968at2759
PhylomeDBiQ96MV1
TreeFamiTF324847

Enzyme and pathway databases

PathwayCommonsiQ96MV1

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...BioGRID-ORCSi		148534, 4 hits in 986 CRISPR screens

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

More...GenomeRNAii		148534
PharosiQ96MV1, Tdark

Protein Ontology

More...PROi		PR:Q96MV1
RNActiQ96MV1, protein

Gene expression databases

BgeeiENSG00000152078, Expressed in pigmented layer of retina and 196 other tissues
ExpressionAtlasiQ96MV1, baseline and differential
GenevisibleiQ96MV1, HS

Family and domain databases

InterProiView protein in InterPro
IPR006634, TLC-dom
PfamiView protein in Pfam
PF03798, TRAM_LAG1_CLN8, 1 hit
SMARTiView protein in SMART
SM00724, TLC, 1 hit
PROSITEiView protein in PROSITE
PS50922, TLC, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiTLCD4_HUMAN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q96MV1
Secondary accession number(s): B2RPI2, D3DT48
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 15, 2007
Last sequence update: December 1, 2001
Last modified: April 7, 2021
This is version 124 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Human chromosome 1
    Human chromosome 1: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families
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