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UniProtKB - Q96G01 (BICD1_HUMAN)

Entry version 150 (12 Aug 2020)
Sequence version 3 (14 Oct 2008)
Previous versions | rss
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Protein

Protein bicaudal D homolog 1

Gene

BICD1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Regulates coat complex coatomer protein I (COPI)-independent Golgi-endoplasmic reticulum transport by recruiting the dynein-dynactin motor complex.

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processHost-virus interaction

Enzyme and pathway databases

Pathway Commons web resource for biological pathway data

More...PathwayCommonsi		Q96G01

Reactome - a knowledgebase of biological pathways and processes

More...Reactomei		R-HSA-6811436, COPI-independent Golgi-to-ER retrograde traffic

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Protein bicaudal D homolog 1
Short name:
Bic-D 1
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:BICD1
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 12

Organism-specific databases

Eukaryotic Pathogen Database Resources

More...EuPathDBi		HostDB:ENSG00000151746.13

Human Gene Nomenclature Database

More...HGNCi		HGNC:1049, BICD1

Online Mendelian Inheritance in Man (OMIM)

More...MIMi		602204, gene

neXtProt; the human protein knowledge platform

More...neXtProti		NX_Q96G01

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Golgi apparatus

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

DisGeNET

More...DisGeNETi		636

Open Targets

More...OpenTargetsi		ENSG00000151746

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...PharmGKBi		PA25352

Miscellaneous databases

Pharos NIH Druggable Genome Knowledgebase

More...Pharosi		Q96G01, Tbio

Polymorphism and mutation databases

BioMuta curated single-nucleotide variation and disease association database

More...BioMutai		BICD1

Domain mapping of disease mutations (DMDM)

More...DMDMi		209572759

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002053571 – 975Protein bicaudal D homolog 1Add BLAST975

Proteomic databases

Encyclopedia of Proteome Dynamics

More...EPDi		Q96G01

jPOST - Japan Proteome Standard Repository/Database

More...jPOSTi		Q96G01

MassIVE - Mass Spectrometry Interactive Virtual Environment

More...MassIVEi		Q96G01

MaxQB - The MaxQuant DataBase

More...MaxQBi		Q96G01

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		Q96G01

PeptideAtlas

More...PeptideAtlasi		Q96G01

PRoteomics IDEntifications database

More...PRIDEi		Q96G01

ProteomicsDB: a multi-organism proteome resource

More...ProteomicsDBi		29543
76577 [Q96G01-1]
76578 [Q96G01-2]
76579 [Q96G01-3]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		Q96G01

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...PhosphoSitePlusi		Q96G01

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Expressed in the brain, heart and skeletal muscle.

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSG00000151746, Expressed in sural nerve and 226 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...ExpressionAtlasi		Q96G01, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		Q96G01, HS

Organism-specific databases

Human Protein Atlas

More...HPAi		ENSG00000151746, Tissue enhanced (brain)

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts with RAB6A.

Interacts (via C-terminus) with RAB6B (GTP-bound); the interaction is direct.

Interacts with CLIP-115 and KIFC2 (By similarity).

By similarity1 Publication

(Microbial infection) Interacts with human cytomegalovirus/HHV-5 protein UL32.

1 Publication

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction%5Fsection">Interaction</a>' section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="https://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated at every <a href="http://www.uniprot.org/help/synchronization">UniProt release</a>.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Hide details

GO - Molecular functioni

Complete GO annotation on QuickGO ...

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...BioGRIDi		107105, 211 interactors

Protein interaction database and analysis system

More...IntActi		Q96G01, 21 interactors

Molecular INTeraction database

More...MINTi		Q96G01

STRING: functional protein association networks

More...STRINGi		9606.ENSP00000281474

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...RNActi		Q96G01, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		Q96G01

Database of comparative protein structure models

More...ModBasei		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni663 – 803Interaction with RAB6AAdd BLAST141

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili1 – 265Sequence analysisAdd BLAST265
Coiled coili319 – 496Sequence analysisAdd BLAST178
Coiled coili663 – 803Sequence analysisAdd BLAST141

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the BicD family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG0999, Eukaryota

Ensembl GeneTree

More...GeneTreei		ENSGT00940000154471

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_2399043_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		Q96G01

KEGG Orthology (KO)

More...KOi		K18739

Identification of Orthologs from Complete Genome Data

More...OMAi		SGATYLQ

Database of Orthologous Groups

More...OrthoDBi		542877at2759

Database for complete collections of gene phylogenies

More...PhylomeDBi		Q96G01

TreeFam database of animal gene trees

More...TreeFami		TF323833

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR018477, BICD

The PANTHER Classification System

More...PANTHERi		PTHR31233, PTHR31233, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF09730, BicD, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (4+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 4 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform. This section is only present in reviewed entries, i.e. in UniProtKB/Swiss-Prot.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 4 described isoforms and 5 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q96G01-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MAAEEVLQTV DHYKTEIERL TKELTETTHE KIQAAEYGLV VLEEKLTLKQ 
        60         70         80         90        100
QYDELEAEYD SLKQELEQLK EAFGQSFSIH RKVAEDGETR EETLLQESAS 
       110        120        130        140        150
KEAYYLGKIL EMQNELKQSR AVVTNVQAEN ERLTAVVQDL KENNEMVELQ 
       160        170        180        190        200
RIRMKDEIRE YKFREARLLQ DYTELEEENI TLQKLVSTLK QNQVEYEGLK 
       210        220        230        240        250
HEIKRFEEET VLLNSQLEDA IRLKEIAEHQ LEEALETLKN EREQKNNLRK 
       260        270        280        290        300
ELSQYISLND NHISISVDGL KFAEDGSEPN NDDKMNGHIH GPLVKLNGDY 
       310        320        330        340        350
RTPTLRKGES LNPVSDLFSE LNISEIQKLK QQLMQVEREK AILLANLQES 
       360        370        380        390        400
QTQLEHTKGA LTEQHERVHR LTEHVNAMRG LQSSKELKAE LDGEKGRDSG 
       410        420        430        440        450
EEAHDYEVDI NGLEILECKY RVAVTEVIDL KAEIKALKEK YNKSVENYTD 
       460        470        480        490        500
EKAKYESKIQ MYDEQVTSLE KTTKESGEKM AHMEKELQKM TSIANENHST 
       510        520        530        540        550
LNTAQDELVT FSEELAQLYH HVCLCNNETP NRVMLDYYRQ SRVTRSGSLK 
       560        570        580        590        600
GPDDPRGLLS PRLARRGVSS PVETRTSSEP VAKESTEASK EPSPTKTPTI 
       610        620        630        640        650
SPVITAPPSS PVLDTSDIRK EPMNIYNLNA IIRDQIKHLQ KAVDRSLQLS 
       660        670        680        690        700
RQRAAARELA PMIDKDKEAL MEEILKLKSL LSTKREQIAT LRAVLKANKQ 
       710        720        730        740        750
TAEVALANLK NKYENEKAMV TETMTKLRNE LKALKEDAAT FSSLRAMFAT 
       760        770        780        790        800
RCDEYVTQLD EMQRQLAAAE DEKKTLNTLL RMAIQQKLAL TQRLEDLEFD 
       810        820        830        840        850
HEQSRRSKGK LGKSKIGSPK VSGEASVTVP TIDTYLLHSQ GPQTPNIRVS 
       860        870        880        890        900
SGTQRKRQFS PSLCDQSRPR TSGASYLQNL LRVPPDPTST ESFLLKGPPS 
       910        920        930        940        950
MSEFIQGHRL SKEKRLTVAP PDCQQPAASV PPQCSQLAGR QDCPTVSPDT 
       960        970 
ALPEEQPHSS SQCAPLHCLS KPPHP
Length:975
Mass (Da):110,750
Last modified:October 14, 2008 - v3
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iCCF0FB12013AA294
GO
Isoform 2 (identifier: Q96G01-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     72-93: AFGQSFSIHRKVAEDGETREET → VSCLSPLPFLALTPPTRKAHSS
     94-975: Missing.

Note: Due to intron retention.Curated
Show »
Length:93
Mass (Da):10,689
Checksum:i2D3BAD41EA5BF9F1
GO
Isoform 3 (identifier: Q96G01-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     858-873: QFSPSLCDQSRPRTSG → YACSDLHSTVQWPDFS
     874-975: Missing.

Note: Due to intron retention.Curated
Show »
Length:873
Mass (Da):99,868
Checksum:i71F286342CB246F9
GO
Isoform 4 (identifier: Q96G01-4) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     821-835: VSGEASVTVPTIDTY → IVSSLLPPYRHSAHN
     836-975: Missing.

Show »
Length:835
Mass (Da):95,739
Checksum:i81A4A7FCCB1D7613
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A8MVZ6A8MVZ6_HUMAN
BICD1 protein
BICD1
827Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F8W056F8W056_HUMAN
Protein bicaudal D homolog 1
BICD1
93Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
U3KQF7U3KQF7_HUMAN
Protein bicaudal D homolog 1
BICD1
69Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F8VZX7F8VZX7_HUMAN
Protein bicaudal D homolog 1
BICD1
79Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A087WYJ7A0A087WYJ7_HUMAN
Protein bicaudal D homolog 1
BICD1
173Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti588A → P in AAB94805 (PubMed:9367685).Curated1
Sequence conflicti746A → T in AAB94805 (PubMed:9367685).Curated1
Sequence conflicti796D → G in AAB94806 (PubMed:9367685).Curated1

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes natural variant(s) of the protein sequence.<p><a href='/help/variant' target='_top'>More...</a></p>Natural variantiVAR_069060778T → A1 PublicationCorresponds to variant dbSNP:rs200845476Ensembl.1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_00796172 – 93AFGQS…TREET → VSCLSPLPFLALTPPTRKAH SS in isoform 2. 1 PublicationAdd BLAST22
Alternative sequenceiVSP_00796294 – 975Missing in isoform 2. 1 PublicationAdd BLAST882
Alternative sequenceiVSP_045637821 – 835VSGEA…TIDTY → IVSSLLPPYRHSAHN in isoform 4. 1 PublicationAdd BLAST15
Alternative sequenceiVSP_045638836 – 975Missing in isoform 4. 1 PublicationAdd BLAST140
Alternative sequenceiVSP_007963858 – 873QFSPS…PRTSG → YACSDLHSTVQWPDFS in isoform 3. 1 PublicationAdd BLAST16
Alternative sequenceiVSP_007964874 – 975Missing in isoform 3. 1 PublicationAdd BLAST102

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
U90028 mRNA Translation: AAB94805.1
U90030 mRNA Translation: AAB94806.1
AK290188 mRNA Translation: BAF82877.1
AK313430 mRNA No translation available.
AC016954 Genomic DNA No translation available.
AC026356 Genomic DNA No translation available.
AC048344 Genomic DNA No translation available.
AC087245 Genomic DNA No translation available.
AC087316 Genomic DNA No translation available.
CH471116 Genomic DNA Translation: EAW88534.1
BC010091 mRNA No translation available.

The Consensus CDS (CCDS) project

More...CCDSi		CCDS44859.1 [Q96G01-4]
CCDS8726.1 [Q96G01-1]

NCBI Reference Sequences

More...RefSeqi		NP_001003398.1, NM_001003398.1 [Q96G01-4]
NP_001705.2, NM_001714.2 [Q96G01-1]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENST00000548411; ENSP00000446793; ENSG00000151746 [Q96G01-4]
ENST00000551848; ENSP00000448933; ENSG00000151746 [Q96G01-2]
ENST00000652176; ENSP00000498700; ENSG00000151746 [Q96G01-1]

Database of genes from NCBI RefSeq genomes

More...GeneIDi		636

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		hsa:636

UCSC genome browser

More...UCSCi		uc001rku.4, human [Q96G01-1]

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U90028 mRNA Translation: AAB94805.1
U90030 mRNA Translation: AAB94806.1
AK290188 mRNA Translation: BAF82877.1
AK313430 mRNA No translation available.
AC016954 Genomic DNA No translation available.
AC026356 Genomic DNA No translation available.
AC048344 Genomic DNA No translation available.
AC087245 Genomic DNA No translation available.
AC087316 Genomic DNA No translation available.
CH471116 Genomic DNA Translation: EAW88534.1
BC010091 mRNA No translation available.
CCDSiCCDS44859.1 [Q96G01-4]
CCDS8726.1 [Q96G01-1]
RefSeqiNP_001003398.1, NM_001003398.1 [Q96G01-4]
NP_001705.2, NM_001714.2 [Q96G01-1]

3D structure databases

SMRiQ96G01
ModBaseiSearch...

Protein-protein interaction databases

BioGRIDi107105, 211 interactors
IntActiQ96G01, 21 interactors
MINTiQ96G01
STRINGi9606.ENSP00000281474

PTM databases

iPTMnetiQ96G01
PhosphoSitePlusiQ96G01

Polymorphism and mutation databases

BioMutaiBICD1
DMDMi209572759

Proteomic databases

EPDiQ96G01
jPOSTiQ96G01
MassIVEiQ96G01
MaxQBiQ96G01
PaxDbiQ96G01
PeptideAtlasiQ96G01
PRIDEiQ96G01
ProteomicsDBi29543
76577 [Q96G01-1]
76578 [Q96G01-2]
76579 [Q96G01-3]

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...Antibodypediai		24706, 58 antibodies

Genome annotation databases

EnsembliENST00000548411; ENSP00000446793; ENSG00000151746 [Q96G01-4]
ENST00000551848; ENSP00000448933; ENSG00000151746 [Q96G01-2]
ENST00000652176; ENSP00000498700; ENSG00000151746 [Q96G01-1]
GeneIDi636
KEGGihsa:636
UCSCiuc001rku.4, human [Q96G01-1]

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		636
DisGeNETi636
EuPathDBiHostDB:ENSG00000151746.13

GeneCards: human genes, protein and diseases

More...GeneCardsi		BICD1
HGNCiHGNC:1049, BICD1
HPAiENSG00000151746, Tissue enhanced (brain)
MIMi602204, gene
neXtProtiNX_Q96G01
OpenTargetsiENSG00000151746
PharmGKBiPA25352

GenAtlas: human gene database

More...GenAtlasi		Search...

Phylogenomic databases

eggNOGiKOG0999, Eukaryota
GeneTreeiENSGT00940000154471
HOGENOMiCLU_2399043_0_0_1
InParanoidiQ96G01
KOiK18739
OMAiSGATYLQ
OrthoDBi542877at2759
PhylomeDBiQ96G01
TreeFamiTF323833

Enzyme and pathway databases

PathwayCommonsiQ96G01
ReactomeiR-HSA-6811436, COPI-independent Golgi-to-ER retrograde traffic

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...BioGRID-ORCSi		636, 1 hit in 868 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...ChiTaRSi		BICD1, human

The Gene Wiki collection of pages on human genes and proteins

More...GeneWikii		BICD1

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

More...GenomeRNAii		636
PharosiQ96G01, Tbio

Protein Ontology

More...PROi		PR:Q96G01
RNActiQ96G01, protein

The Stanford Online Universal Resource for Clones and ESTs

More...SOURCEi		Search...

Gene expression databases

BgeeiENSG00000151746, Expressed in sural nerve and 226 other tissues
ExpressionAtlasiQ96G01, baseline and differential
GenevisibleiQ96G01, HS

Family and domain databases

InterProiView protein in InterPro
IPR018477, BICD
PANTHERiPTHR31233, PTHR31233, 1 hit
PfamiView protein in Pfam
PF09730, BicD, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiBICD1_HUMAN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q96G01
Secondary accession number(s): A8K2C3
, F8W113, O43892, O43893
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 15, 2003
Last sequence update: October 14, 2008
Last modified: August 12, 2020
This is version 150 of the entry and version 3 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Human chromosome 12
    Human chromosome 12: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. SIMILARITY comments
    Index of protein domains and families
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