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Protein

Histone acetyltransferase Tip60

Gene

Tip60

Organism
Drosophila melanogaster (Fruit fly)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Catalytic subunit of the Tip60 chromatin-remodeling complex which is involved in DNA repair. Upon induction of DNA double-strand breaks, acetylates phosphorylated histone H2AV in nucleosomes on 'Lys-4' and exchanges it with unmodified H2AV.1 Publication

Catalytic activityi

Acetyl-CoA + [protein]-L-lysine = CoA + [protein]-N6-acetyl-L-lysine.1 Publication

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei431Proton donor/acceptorBy similarity1
Binding sitei435Acetyl-CoABy similarity1
Binding sitei444Acetyl-CoABy similarity1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri288 – 313C2HC MYST-typePROSITE-ProRule annotationAdd BLAST26

GO - Molecular functioni

  • euchromatin binding Source: FlyBase
  • H4 histone acetyltransferase activity Source: GO_Central
  • histone acetyltransferase activity Source: UniProtKB
  • histone binding Source: GO_Central
  • metal ion binding Source: UniProtKB-KW

GO - Biological processi

Keywordsi

Molecular functionAcyltransferase, Chromatin regulator, Transferase
Biological processTranscription, Transcription regulation
LigandMetal-binding, Zinc

Enzyme and pathway databases

ReactomeiR-DME-201722 Formation of the beta-catenin:TCF transactivating complex
R-DME-2559586 DNA Damage/Telomere Stress Induced Senescence
R-DME-5693548 Sensing of DNA Double Strand Breaks
R-DME-5693565 Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks
R-DME-5693571 Nonhomologous End-Joining (NHEJ)
R-DME-5693607 Processing of DNA double-strand break ends
R-DME-9018519 Estrogen-dependent gene expression

Names & Taxonomyi

Protein namesi
Recommended name:
Histone acetyltransferase Tip60 (EC:2.3.1.481 Publication)
Gene namesi
Name:Tip60
ORF Names:CG6121
OrganismiDrosophila melanogaster (Fruit fly)
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome X

Organism-specific databases

FlyBaseiFBgn0026080 Tip60

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000515831 – 541Histone acetyltransferase Tip60Add BLAST541

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei355N6-acetyllysine; by autocatalysisBy similarity1

Post-translational modificationi

Autoacetylation at Lys-355 is required for proper function.By similarity

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiQ960X4
PRIDEiQ960X4

Expressioni

Gene expression databases

BgeeiFBgn0026080 Expressed in 29 organ(s), highest expression level in embryo
ExpressionAtlasiQ960X4 baseline and differential
GenevisibleiQ960X4 DM

Interactioni

Subunit structurei

Component of the Tip60 chromatin-remodeling complex which contains the catalytic subunit Tip60 and the subunits Domino, Tra1, Brd8, E(Pc), DMAP1, Pontin, Reptin, Ing3, Act87E, BAP55, Mrg15, MrgBP, Gas41 and YL-1.1 Publication

GO - Molecular functioni

Protein-protein interaction databases

BioGridi57879, 21 interactors
IntActiQ960X4, 4 interactors
STRINGi7227.FBpp0070636

Structurei

3D structure databases

ProteinModelPortaliQ960X4
SMRiQ960X4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini255 – 533MYST-type HATPROSITE-ProRule annotationAdd BLAST279

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni398 – 400Acetyl-CoA bindingBy similarity3
Regioni405 – 411Acetyl-CoA bindingBy similarity7

Sequence similaritiesi

Belongs to the MYST (SAS/MOZ) family.Curated

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri288 – 313C2HC MYST-typePROSITE-ProRule annotationAdd BLAST26

Keywords - Domaini

Zinc-finger

Phylogenomic databases

eggNOGiKOG2747 Eukaryota
COG5027 LUCA
GeneTreeiENSGT00930000150839
InParanoidiQ960X4
KOiK11304
OMAiKMQVYHK
OrthoDBiEOG091G0B73
PhylomeDBiQ960X4

Family and domain databases

CDDicd00024 CHROMO, 1 hit
Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR016181 Acyl_CoA_acyltransferase
IPR016197 Chromo-like_dom_sf
IPR000953 Chromo/chromo_shadow_dom
IPR037995 Esa1/KAT5/Tip60
IPR002717 HAT_MYST-type
IPR025995 Tudor-knot
IPR036388 WH-like_DNA-bd_sf
PANTHERiPTHR10615:SF124 PTHR10615:SF124, 1 hit
PfamiView protein in Pfam
PF01853 MOZ_SAS, 1 hit
PF11717 Tudor-knot, 1 hit
SMARTiView protein in SMART
SM00298 CHROMO, 1 hit
SUPFAMiSSF54160 SSF54160, 1 hit
SSF55729 SSF55729, 1 hit
PROSITEiView protein in PROSITE
PS51726 MYST_HAT, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

Q960X4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKINHKYEFD DDVASICEST AALTEGCRLP VRMHKTDDWP LAEIVSIKEL
60 70 80 90 100
DGRRQFYVHY VDFNKRLDEW VNEEDLYTRK VQFPRRDGSQ TGTSTGVTTP
110 120 130 140 150
QRHHSLAGSV SRPTSPQHPG SGALAAIPQT PTGASGSVPP PAGIPNSVAP
160 170 180 190 200
PGTPSSGGEL VNGNNLAAAL QKRINRKRKN HGGSAHGHHS LTSQQQQSHP
210 220 230 240 250
HPTTPQTPTA TPVHVTGDGL ISGAANDDGD GSQDGKTPTP RQSGSMVTHQ
260 270 280 290 300
DDVVTRMKNV EMIELGRHRI KPWYFSPYPQ ELCQMPCIYI CEFCLKYRKS
310 320 330 340 350
RKCLERHLSK CNLRHPPGNE IYRKHTISFF EIDGRKNKVY AQNLCLLAKL
360 370 380 390 400
FLDHKTLYYD TDPFLFYVMT EFDSRGFHIV GYFSKEKEST EDYNVACILT
410 420 430 440 450
MPPYQRKGYG KLLIEFSYEL SKFEGKTGSP EKPLSDLGLL SYRSYWAQTI
460 470 480 490 500
LEIFISQNPS TDGEKPTITI NDICECTSIK KEDVISTLQN LNLINYYKGQ
510 520 530 540
YIVCINRVII EQHRRAMDKR KIRIDSKCLH WTPKDWSKRS K
Length:541
Mass (Da):61,234
Last modified:December 1, 2001 - v1
Checksum:iF48A3415B708A97C
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
M9PGN1M9PGN1_DROME
Histone acetyltransferase
Tip60 6121, DmEG0007.7, Dmel, Dmel\CG6121, Dmel\TIP60
541Annotation score:
M9PH08M9PH08_DROME
Histone acetyltransferase
Tip60 6121, DmEG0007.7, Dmel, Dmel\CG6121, Dmel\TIP60
473Annotation score:

Sequence cautioni

The sequence CAA21829 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014298 Genomic DNA Translation: AAF45923.3
AL033125 Genomic DNA Translation: CAA21829.1 Sequence problems.
AY051795 mRNA Translation: AAK93219.1
RefSeqiNP_001259234.1, NM_001272305.1
NP_572151.1, NM_131923.4
UniGeneiDm.75

Genome annotation databases

EnsemblMetazoaiFBtr0070668; FBpp0070636; FBgn0026080
FBtr0333186; FBpp0305388; FBgn0026080
GeneIDi31362
KEGGidme:Dmel_CG6121

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014298 Genomic DNA Translation: AAF45923.3
AL033125 Genomic DNA Translation: CAA21829.1 Sequence problems.
AY051795 mRNA Translation: AAK93219.1
RefSeqiNP_001259234.1, NM_001272305.1
NP_572151.1, NM_131923.4
UniGeneiDm.75

3D structure databases

ProteinModelPortaliQ960X4
SMRiQ960X4
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi57879, 21 interactors
IntActiQ960X4, 4 interactors
STRINGi7227.FBpp0070636

Proteomic databases

PaxDbiQ960X4
PRIDEiQ960X4

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiFBtr0070668; FBpp0070636; FBgn0026080
FBtr0333186; FBpp0305388; FBgn0026080
GeneIDi31362
KEGGidme:Dmel_CG6121

Organism-specific databases

CTDi31362
FlyBaseiFBgn0026080 Tip60

Phylogenomic databases

eggNOGiKOG2747 Eukaryota
COG5027 LUCA
GeneTreeiENSGT00930000150839
InParanoidiQ960X4
KOiK11304
OMAiKMQVYHK
OrthoDBiEOG091G0B73
PhylomeDBiQ960X4

Enzyme and pathway databases

ReactomeiR-DME-201722 Formation of the beta-catenin:TCF transactivating complex
R-DME-2559586 DNA Damage/Telomere Stress Induced Senescence
R-DME-5693548 Sensing of DNA Double Strand Breaks
R-DME-5693565 Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks
R-DME-5693571 Nonhomologous End-Joining (NHEJ)
R-DME-5693607 Processing of DNA double-strand break ends
R-DME-9018519 Estrogen-dependent gene expression

Miscellaneous databases

ChiTaRSiTip60 fly
GenomeRNAii31362
PROiPR:Q960X4

Gene expression databases

BgeeiFBgn0026080 Expressed in 29 organ(s), highest expression level in embryo
ExpressionAtlasiQ960X4 baseline and differential
GenevisibleiQ960X4 DM

Family and domain databases

CDDicd00024 CHROMO, 1 hit
Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR016181 Acyl_CoA_acyltransferase
IPR016197 Chromo-like_dom_sf
IPR000953 Chromo/chromo_shadow_dom
IPR037995 Esa1/KAT5/Tip60
IPR002717 HAT_MYST-type
IPR025995 Tudor-knot
IPR036388 WH-like_DNA-bd_sf
PANTHERiPTHR10615:SF124 PTHR10615:SF124, 1 hit
PfamiView protein in Pfam
PF01853 MOZ_SAS, 1 hit
PF11717 Tudor-knot, 1 hit
SMARTiView protein in SMART
SM00298 CHROMO, 1 hit
SUPFAMiSSF54160 SSF54160, 1 hit
SSF55729 SSF55729, 1 hit
PROSITEiView protein in PROSITE
PS51726 MYST_HAT, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiTIP60_DROME
AccessioniPrimary (citable) accession number: Q960X4
Secondary accession number(s): O97425
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 7, 2006
Last sequence update: December 1, 2001
Last modified: November 7, 2018
This is version 150 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programDrosophila annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Drosophila
    Drosophila: entries, gene names and cross-references to FlyBase
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Main funding by: National Institutes of Health

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