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Protein

Ribosomal protein S12, mitochondrial

Gene

RPS12

Organism
Allium cepa (Onion)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Protein S12 is involved in the translation initiation step.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal protein S12, mitochondrial
Gene namesi
Name:RPS12
Encoded oniMitochondrion
OrganismiAllium cepa (Onion)
Taxonomic identifieri4679 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaAsparagalesAmaryllidaceaeAllioideaeAllieaeAllium

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001464321 – 125Ribosomal protein S12, mitochondrialAdd BLAST125

Proteomic databases

PRIDEiQ96008

Structurei

3D structure databases

ProteinModelPortaliQ96008
SMRiQ96008
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Family and domain databases

CDDicd03368 Ribosomal_S12, 1 hit
HAMAPiMF_00403_B Ribosomal_S12_B, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR006032 Ribosomal_S12/S23
IPR005679 Ribosomal_S12_bac
PANTHERiPTHR11652 PTHR11652, 1 hit
PfamiView protein in Pfam
PF00164 Ribosom_S12_S23, 1 hit
PIRSFiPIRSF002133 Ribosomal_S12/S23, 1 hit
PRINTSiPR01034 RIBOSOMALS12
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00981 rpsL_bact, 1 hit
PROSITEiView protein in PROSITE
PS00055 RIBOSOMAL_S12, 1 hit

Sequencei

Sequence statusi: Complete.

Q96008-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPTFNQLIRH GREEKRRTDR TRALDQCPQK QGVCLRVLTI TPKKPNSALR
60 70 80 90 100
KIAKVRLTNR HDIFAYIPGE GHNSQEHSIV LVRGGRVKDL PGVKFHCIRG
110 120
VKDLLGIPDR RRGRSKYGAE KPKSK
Length:125
Mass (Da):14,299
Last modified:February 1, 1997 - v1
Checksum:iFBE27A9179777C51
GO

RNA editingi

Edited at positions 24, 35, 66, 78, 90 and 95.1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z49772 mRNA Translation: CAA89851.1
Z49771 Genomic DNA Translation: CAA89849.1 Sequence problems.
PIRiS71087
RefSeqiYP_009252181.1, NC_030100.1

Genome annotation databases

GeneIDi27815621

Keywords - Coding sequence diversityi

RNA editing

Similar proteinsi

Entry informationi

Entry nameiRT12_ALLCE
AccessioniPrimary (citable) accession number: Q96008
Secondary accession number(s): Q96006
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: April 12, 2017
This is version 75 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

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