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Protein

Serpentine receptor class beta-1

Gene

srb-1

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Serpentine receptor class beta-1
Short name:
Protein srb-1
Gene namesi
Name:srb-1
ORF Names:C27D6.10
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiC27D6.10 ; CE06890 ; WBGene00005066 ; srb-1

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei22 – 42HelicalSequence analysisAdd BLAST21
Transmembranei66 – 86HelicalSequence analysisAdd BLAST21
Transmembranei102 – 122HelicalSequence analysisAdd BLAST21
Transmembranei141 – 161HelicalSequence analysisAdd BLAST21
Transmembranei188 – 208HelicalSequence analysisAdd BLAST21
Transmembranei240 – 260HelicalSequence analysisAdd BLAST21
Transmembranei279 – 299HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001044961 – 341Serpentine receptor class beta-1Add BLAST341

Proteomic databases

PaxDbiQ95ZY0

Interactioni

Protein-protein interaction databases

STRINGi6239.C27D6.10

Structurei

3D structure databases

ProteinModelPortaliQ95ZY0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410K9I2 Eukaryota
ENOG4110J9N LUCA
GeneTreeiENSGT00390000002942
HOGENOMiHOG000017074
InParanoidiQ95ZY0
OMAiNIKFMLI
OrthoDBiEOG091G1K9H
PhylomeDBiQ95ZY0

Family and domain databases

InterProiView protein in InterPro
IPR002184 7TM_GPCR_serpentine_rcpt_Srb
PfamiView protein in Pfam
PF02175 7TM_GPCR_Srb, 1 hit
PRINTSiPR00699 TMPROTEINSRB

Sequencei

Sequence statusi: Complete.

Q95ZY0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNIENKCDLA FEVTYHPLYR AAQFWTFIFS TLAVPALFIF LLKQIFPLPF
60 70 80 90 100
HGNIKFMLIS YFLSAFLFAV VLALTFGYHI LVPLFITSKC DLIIQPYLFK
110 120 130 140 150
VGQLSLTLFI TLQMIMPFGF SIERIIALRM AKSYENVRTV LGPLLIFVLI
160 170 180 190 200
GIDLILLFTV FRDESFNDSF ISFILIPATT AQTFNSYCWI LLYAELGNLL
210 220 230 240 250
CNCIILLVHS KFKTKFLHQQ RSLSVRYELE EISQTSKFTL IVSFTHILFI
260 270 280 290 300
GWYLGVTIFI RTVGETFFGS YINYTVARGV YISVPTYNLT IVFVGIKALS
310 320 330 340
FMNLKRQNNV QSKVQIKSTG SEGARNYENA IASYWNSVSK A
Length:341
Mass (Da):39,105
Last modified:December 1, 2001 - v1
Checksum:i3E884AD01AD90B3B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO080688 Genomic DNA Translation: CCD65817.1
RefSeqiNP_494965.1, NM_062564.3
UniGeneiCel.36897

Genome annotation databases

EnsemblMetazoaiC27D6.10; C27D6.10; WBGene00005066
GeneIDi191783
KEGGicel:CELE_C27D6.10
UCSCiC27D6.10 c. elegans

Similar proteinsi

Entry informationi

Entry nameiSRB1_CAEEL
AccessioniPrimary (citable) accession number: Q95ZY0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 23, 2003
Last sequence update: December 1, 2001
Last modified: July 5, 2017
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. SIMILARITY comments
    Index of protein domains and families

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