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Protein
Submitted name:

C-type LECtin

Gene

clec-6

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

GO - Molecular functioni

Keywordsi

LigandLectinImported

Names & Taxonomyi

Protein namesi
Submitted name:
C-type LECtinImported
Gene namesi
Name:clec-6Imported
ORF Names:C35D10.15Imported, CELE_C35D10.15Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome III

Organism-specific databases

WormBaseiC35D10.15 ; CE27829 ; WBGene00016451 ; clec-6

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 17Sequence analysisAdd BLAST17
ChainiPRO_500432214918 – 407Sequence analysisAdd BLAST390

Keywords - PTMi

Disulfide bondSAAS annotation

Proteomic databases

PaxDbiQ95QR9

Expressioni

Gene expression databases

BgeeiWBGene00016451

Interactioni

Protein-protein interaction databases

STRINGi6239.C35D10.15

Structurei

3D structure databases

ProteinModelPortaliQ95QR9
SMRiQ95QR9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini30 – 141C-type lectinInterPro annotationAdd BLAST112
Domaini163 – 272C-type lectinInterPro annotationAdd BLAST110
Domaini298 – 406CUBInterPro annotationAdd BLAST109

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG4297 Eukaryota
ENOG410XPJ1 LUCA
GeneTreeiENSGT00440000034850
HOGENOMiHOG000016317
InParanoidiQ95QR9
OMAiEICEHEC
OrthoDBiEOG091H067K
PhylomeDBiQ95QR9

Family and domain databases

CDDicd00041 CUB, 1 hit
Gene3Di2.60.120.290, 1 hit
3.10.100.10, 2 hits
InterProiView protein in InterPro
IPR001304 C-type_lectin-like
IPR016186 C-type_lectin-like/link_sf
IPR018378 C-type_lectin_CS
IPR016187 CTDL_fold
IPR000859 CUB_dom
IPR035914 Sperma_CUB_dom_sf
PfamiView protein in Pfam
PF00431 CUB, 1 hit
PF00059 Lectin_C, 2 hits
SMARTiView protein in SMART
SM00034 CLECT, 2 hits
SM00042 CUB, 1 hit
SUPFAMiSSF49854 SSF49854, 1 hit
SSF56436 SSF56436, 2 hits
PROSITEiView protein in PROSITE
PS00615 C_TYPE_LECTIN_1, 1 hit
PS50041 C_TYPE_LECTIN_2, 2 hits
PS01180 CUB, 1 hit

Sequencei

Sequence statusi: Complete.

Q95QR9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIKHLVVLSL FALSAFGAKP LVCTNGFTLI NNKCLRLFST PLGHSASKSK
60 70 80 90 100
CMEYGATLVT VKNAIENNSV SKIAASSSSS LWIGLYCFDS DVTKCMWDDS
110 120 130 140 150
TGSAEMYNSF ASGFPHVDIG KCVYHFTQGF LGGKWLNGDC DTETRAFVCE
160 170 180 190 200
LTETLEDSCE YNYNGHCYSF HQPATFAQAQ VICEQECGNL ASIHSSNENR
210 220 230 240 250
YLSSIISSLS NKNYYIGASW PSTSVLTWLD GSTSDYNNIS PSSAHEGNCA
260 270 280 290 300
LLSSQEQWLS SPCTSSQPFV CKRSVGSQCF STPPLVTITP TPPNPSSCNS
310 320 330 340 350
TLLMAPGKIT SPNFPSNYGN NQFCSYHLST LGSYRVALYF LTFTTEFFFD
360 370 380 390 400
FVVVYDGDSA SSPKMGNYSG SKNPFALTST GNNMFVTFKS DHSNTFQGFD

ARFQSSV
Length:407
Mass (Da):44,416
Last modified:December 1, 2001 - v1
Checksum:i8D558D52641C32E6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA Translation: CCD66788.1
RefSeqiNP_498023.1, NM_065622.1
UniGeneiCel.25290

Genome annotation databases

EnsemblMetazoaiC35D10.15; C35D10.15; WBGene00016451
GeneIDi183242
KEGGicel:CELE_C35D10.15
UCSCiC35D10.15 c. elegans

Entry informationi

Entry nameiQ95QR9_CAEEL
AccessioniPrimary (citable) accession number: Q95QR9
Entry historyiIntegrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: November 22, 2017
This is version 115 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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