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Protein

Ferritin-4, chloroplastic

Gene
N/A
Organism
Glycine max (Soybean) (Glycine hispida)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation (By similarity).By similarity

Catalytic activityi

4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi91Iron 1PROSITE-ProRule annotation1
Metal bindingi126Iron 1PROSITE-ProRule annotation1
Metal bindingi126Iron 2PROSITE-ProRule annotation1
Metal bindingi129Iron 1PROSITE-ProRule annotation1
Metal bindingi175Iron 2PROSITE-ProRule annotation1
Metal bindingi209Iron 2PROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionOxidoreductase
Biological processIron storage
LigandIron, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Ferritin-4, chloroplastic (EC:1.16.3.1)
Alternative name(s):
SFerH-4
OrganismiGlycine max (Soybean) (Glycine hispida)
Taxonomic identifieri3847 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja
Proteomesi
  • UP000008827 Componenti: Chromosome 14

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 40ChloroplastSequence analysisAdd BLAST40
ChainiPRO_000000886741 – 247Ferritin-4, chloroplasticAdd BLAST207

Proteomic databases

PRIDEiQ948P5

Expressioni

Gene expression databases

GenevisibleiQ948P5 GM

Interactioni

Subunit structurei

Oligomer of 24 subunits. There are two types of subunits: L (light) chain and H (heavy) chain. The major chain can be light or heavy, depending on the species and tissue type. The functional molecule forms a roughly spherical shell with a diameter of 12 nm and contains a central cavity into which the insoluble mineral iron core is deposited (By similarity).By similarity

Structurei

Secondary structure

1247
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi52 – 56Combined sources5
Turni57 – 62Combined sources6
Helixi78 – 105Combined sources28
Turni108 – 110Combined sources3
Helixi113 – 140Combined sources28
Turni159 – 161Combined sources3
Helixi163 – 191Combined sources29
Helixi195 – 204Combined sources10
Helixi206 – 226Combined sources21
Helixi230 – 240Combined sources11

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3A68X-ray1.80A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/T/U/V/W/X36-247[»]
3A9QX-ray1.90A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/T/U/V/W/X36-247[»]
SMRiQ948P5
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ948P5

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini74 – 227Ferritin-like diironPROSITE-ProRule annotationAdd BLAST154

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni41 – 73Extension peptide (EP)Add BLAST33

Sequence similaritiesi

Belongs to the ferritin family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiENOG410IU11 Eukaryota
ENOG410Y5ZV LUCA
InParanoidiQ948P5
KOiK00522
OMAiYVFDKEH
OrthoDBiEOG09360PX4

Family and domain databases

Gene3Di1.20.1260.10, 1 hit
InterProiView protein in InterPro
IPR001519 Ferritin
IPR012347 Ferritin-like
IPR009040 Ferritin-like_diiron
IPR014034 Ferritin_CS
IPR008331 Ferritin_DPS_dom
PANTHERiPTHR11431 PTHR11431, 1 hit
PfamiView protein in Pfam
PF00210 Ferritin, 1 hit
PROSITEiView protein in PROSITE
PS00204 FERRITIN_2, 1 hit
PS50905 FERRITIN_LIKE, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q948P5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLRTAAASA SSLSLFSPNA EPPRSVPARG LVVRAAKGST NHRALTGVIF
60 70 80 90 100
EPFEEVKKEL DLVPTVPQAS LARQKYVDES ESAVNEQINV EYNVSYVYHA
110 120 130 140 150
MFAYFDRDNV ALRGLAKFFK ESSEEEREHA EKLMEYQNKR GGKVKLQSIV
160 170 180 190 200
MPLSDFDHAD KGDALHAMEL ALSLEKLTNE KLLNLHSVAT KNGDVQLADF
210 220 230 240
VETEYLGEQV EAIKRISEYV AQLRRVGKGH GVWHFDQMLL HEGGDAA
Length:247
Mass (Da):27,559
Last modified:September 22, 2009 - v2
Checksum:i9A643DDFB5DDEDE3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB062756 mRNA Translation: BAB64537.2
RefSeqiNP_001237049.1, NM_001250120.1
UniGeneiGma.18301

Genome annotation databases

EnsemblPlantsiKRH14913; KRH14913; GLYMA_14G056800
GeneIDi547477
GrameneiKRH14913; KRH14913; GLYMA_14G056800
KEGGigmx:547477

Similar proteinsi

Entry informationi

Entry nameiFRI4_SOYBN
AccessioniPrimary (citable) accession number: Q948P5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 11, 2003
Last sequence update: September 22, 2009
Last modified: April 25, 2018
This is version 91 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

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