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Protein
Submitted name:

REgulator of Fusion

Gene

ref-2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

  • DNA-templated transcription, initiation Source: WormBase
  • nematode larval development Source: WormBase
  • neuron fate specification Source: WormBase

Keywordsi

LigandMetal-binding, Zinc

Enzyme and pathway databases

SignaLinkiQ94178

Names & Taxonomyi

Protein namesi
Submitted name:
REgulator of FusionImported
Gene namesi
Name:ref-2Imported
ORF Names:C47C12.3Imported, CELE_C47C12.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome X

Organism-specific databases

WormBaseiC47C12.3a ; CE33037 ; WBGene00004335 ; ref-2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiWBGene00004335
ExpressionAtlasiQ94178 baseline and differential

Interactioni

Protein-protein interaction databases

IntActiQ94178, 1 interactor

Structurei

3D structure databases

ProteinModelPortaliQ94178
SMRiQ94178
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini111 – 138C2H2-typeInterPro annotationAdd BLAST28
Domaini139 – 166C2H2-typeInterPro annotationAdd BLAST28
Domaini167 – 196C2H2-typeInterPro annotationAdd BLAST30
Domaini197 – 226C2H2-typeInterPro annotationAdd BLAST30

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00900000140802
HOGENOMiHOG000020970
OrthoDBiEOG091G0M59

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 4 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 4 hits

Sequencei

Sequence statusi: Complete.

Q94178-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHSDYYTQSQ GPTVEQQPEW QASVQPYSDP HAYSPSFYMN MSQVPHFLPA
60 70 80 90 100
QVDPFIYPNT LGSYGGDKQV QCLWETNGQV CMHVCQNSGE LSTHISSNHI
110 120 130 140 150
THDSKFVCLW KGCDREFKMF KAKYKLVNHM RVHTGERPFL CDVCNKVFAR
160 170 180 190 200
SENLKIHKRI HSGEKPFQCT HNGCTKLFAN SSDRKKHMHV HSSHKPYSCM
210 220 230 240 250
YPDCGKTYTH PSSLRKHTKV HENEKKSQLS PEHDESSDSG NASIGTPTTD
260 270 280 290 300
ESLTFSPENI KRDQHLHTMH TFMDRPNPFM QMYQNQFSNP TYHMFMAKPD

SY
Length:302
Mass (Da):34,931
Last modified:June 1, 2003 - v2
Checksum:i05B419B02251CD30
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA Translation: CCD67553.1
PIRiT25648
RefSeqiNP_001024477.1, NM_001029306.2
UniGeneiCel.9301

Genome annotation databases

EnsemblMetazoaiC47C12.3a.1; C47C12.3a.1; WBGene00004335
C47C12.3a.2; C47C12.3a.2; WBGene00004335
GeneIDi183539
UCSCiC47C12.3b c. elegans

Similar proteinsi

Entry informationi

Entry nameiQ94178_CAEEL
AccessioniPrimary (citable) accession number: Q94178
Entry historyiIntegrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: June 1, 2003
Last modified: February 28, 2018
This is version 137 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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