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Protein
Submitted name:

Putative transcription regulator

Gene

SMc03896

Organism
Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi140 – 159H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Enzyme and pathway databases

BioCyciSMEL266834:GJF6-3367-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Putative transcription regulatorImported
Gene namesi
ORF Names:SMc03896Imported
OrganismiRhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)Imported
Taxonomic identifieri266834 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
Proteomesi
  • UP000001976 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  • protein-DNA complex Source: CollecTF

Expressioni

Gene expression databases

CollecTFiEXPREG_00001440

Interactioni

Protein-protein interaction databases

STRINGi266834.SMc03896

Structurei

3D structure databases

ProteinModelPortaliQ92L12
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini116 – 181HTH luxR-typeInterPro annotationAdd BLAST66

Phylogenomic databases

eggNOGiENOG4108R8P Bacteria
ENOG4111FND LUCA
HOGENOMiHOG000295724
KOiK07782
OMAiNHTVDWY

Family and domain databases

CDDicd06170 LuxR_C_like, 1 hit
Gene3Di1.10.10.10, 1 hit
3.30.450.80, 1 hit
InterProiView protein in InterPro
IPR016032 Sig_transdc_resp-reg_C-effctor
IPR005143 TF_LuxR_autoind-bd_dom
IPR036693 TF_LuxR_autoind-bd_dom_sf
IPR000792 Tscrpt_reg_LuxR_C
IPR036388 WH-like_DNA-bd_sf
PfamiView protein in Pfam
PF03472 Autoind_bind, 1 hit
PF00196 GerE, 1 hit
PRINTSiPR00038 HTHLUXR
SMARTiView protein in SMART
SM00421 HTH_LUXR, 1 hit
SUPFAMiSSF46894 SSF46894, 1 hit
SSF75516 SSF75516, 1 hit
PROSITEiView protein in PROSITE
PS50043 HTH_LUXR_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q92L12-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGATPIRKKY VVIDPTIRFL GHAQRGFRWR DTLVAFRSDP HRKRMESMMV
60 70 80 90 100
EARNHGLFDG YIFPVHGRRG LMGNLTVGGR VVDLSPVELS LFDAIAKRLF
110 120 130 140 150
WKLLELTDPE IMAELVSRVE VQMTRREMEA LHYLADGMTS NDIGKVLDIS
160 170 180
SHTVDWYMNG IQEKLKAKNR HHVVAIAFRL GLIS
Length:184
Mass (Da):21,101
Last modified:December 1, 2001 - v1
Checksum:i0AA276FE7CC981CD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL591688 Genomic DNA Translation: CAC47858.1
RefSeqiNP_387385.1, NC_003047.1
WP_010970539.1, NC_003047.1

Genome annotation databases

EnsemblBacteriaiCAC47858; CAC47858; SMc03896
GeneIDi1234973
KEGGisme:SMc03896
PATRICifig|266834.11.peg.4838

Similar proteinsi

Entry informationi

Entry nameiQ92L12_RHIME
AccessioniPrimary (citable) accession number: Q92L12
Entry historyiIntegrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: February 28, 2018
This is version 106 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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