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UniProtKB - Q92696 (PGTA_HUMAN)

Entry version 190 (25 May 2022)
Sequence version 2 (15 Jul 1999)
Previous versions | rss
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Protein

Geranylgeranyl transferase type-2 subunit alpha

Gene

RABGGTA

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of Rab proteins with the C-terminal sequence -XXCC, -XCXC and -CCXX, such as RAB1A, RAB3A, RAB5A and RAB7A.

1 Publication

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes regulatory mechanisms for enzymes, transporters or microbial transcription factors, and reports the components which regulate (by activation or inhibition) the reaction.<p><a href='/help/activity_regulation' target='_top'>More...</a></p>Activity regulationi

The enzymatic reaction requires the aid of a Rab escort protein (also called component A), such as CHM.

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionPrenyltransferase, Transferase

Enzyme and pathway databases

Pathway Commons web resource for biological pathway data

More...PathwayCommonsi		Q92696

Reactome - a knowledgebase of biological pathways and processes

More...Reactomei		R-HSA-6803205, TP53 regulates transcription of several additional cell death genes whose specific roles in p53-dependent apoptosis remain uncertain
R-HSA-8873719, RAB geranylgeranylation

SignaLink: a signaling pathway resource with multi-layered regulatory networks

More...SignaLinki		Q92696

SIGNOR Signaling Network Open Resource

More...SIGNORi		Q92696

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Geranylgeranyl transferase type-2 subunit alpha (EC:2.5.1.60)
Alternative name(s):
Geranylgeranyl transferase type II subunit alpha
Rab geranyl-geranyltransferase subunit alpha
Short name:
Rab GG transferase alpha
Short name:
Rab GGTase alpha
Rab geranylgeranyltransferase subunit alpha
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:RABGGTA
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componentsi: Chromosome 14, Unplaced

Organism-specific databases

Human Gene Nomenclature Database

More...HGNCi		HGNC:9795, RABGGTA

Online Mendelian Inheritance in Man (OMIM)

More...MIMi		601905, gene

neXtProt; the human protein knowledge platform

More...neXtProti		NX_Q92696

Eukaryotic Pathogen, Vector and Host Database Resources

More...VEuPathDBi		HostDB:ENSG00000100949

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

DisGeNET

More...DisGeNETi		5875

Open Targets

More...OpenTargetsi		ENSG00000100949

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...PharmGKBi		PA34156

Miscellaneous databases

Pharos NIH Druggable Genome Knowledgebase

More...Pharosi		Q92696, Tdark

Chemistry databases

ChEMBL database of bioactive drug-like small molecules

More...ChEMBLi		CHEMBL5249

Drug and drug target database

More...DrugBanki		DB07780, Farnesyl diphosphate
DB07841, Geranylgeranyl diphosphate
DB04464, N-Formylmethionine

Genetic variation databases

BioMuta curated single-nucleotide variation and disease association database

More...BioMutai		RABGGTA

Domain mapping of disease mutations (DMDM)

More...DMDMi		6093707

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00001197571 – 567Geranylgeranyl transferase type-2 subunit alphaAdd BLAST567

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei98PhosphoserineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

Encyclopedia of Proteome Dynamics

More...EPDi		Q92696

jPOST - Japan Proteome Standard Repository/Database

More...jPOSTi		Q92696

MassIVE - Mass Spectrometry Interactive Virtual Environment

More...MassIVEi		Q92696

MaxQB - The MaxQuant DataBase

More...MaxQBi		Q92696

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		Q92696

PeptideAtlas

More...PeptideAtlasi		Q92696

PRoteomics IDEntifications database

More...PRIDEi		Q92696

ProteomicsDB: a multi-organism proteome resource

More...ProteomicsDBi		75413

PTM databases

GlyGen: Computational and Informatics Resources for Glycoscience

More...GlyGeni		Q92696, 1 site, 1 O-linked glycan (1 site)

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		Q92696

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...PhosphoSitePlusi		Q92696

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSG00000100949, Expressed in lower esophagus mucosa and 212 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...ExpressionAtlasi		Q92696, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		Q92696, HS

Organism-specific databases

Human Protein Atlas

More...HPAi		ENSG00000100949, Tissue enhanced (esophagus)

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Heterotrimer composed of RABGGTA, RABGGTB and CHM; within this trimer, RABGGTA and RABGGTB form the catalytic component B, while CHM (component A) mediates peptide substrate binding (PubMed:7991565). The Rab GGTase dimer (RGGT) interacts with CHM (component A) prior to Rab protein binding; the association is stabilized by geranylgeranyl pyrophosphate (GGpp). The CHM:RGGT:Rab complex is destabilized by GGpp (PubMed:18532927).

Interacts with non-phosphorylated form of RAB8A; phosphorylation of RAB8A at 'Thr-72' disrupts this interaction (PubMed:26824392).

3 Publications

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction%5Fsection">Interaction</a>' section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="https://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated at every <a href="http://www.uniprot.org/help/synchronization">UniProt release</a>.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Hide details

GO - Molecular functioni

Complete GO annotation on QuickGO ...

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...BioGRIDi		111813, 75 interactors

ComplexPortal: manually curated resource of macromolecular complexes

More...ComplexPortali		CPX-2919, Protein geranylgeranyltransferase type II complex

CORUM comprehensive resource of mammalian protein complexes

More...CORUMi		Q92696

Protein interaction database and analysis system

More...IntActi		Q92696, 23 interactors

Molecular INTeraction database

More...MINTi		Q92696

STRING: functional protein association networks

More...STRINGi		9606.ENSP00000382341

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...RNActi		Q92696, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

AlphaFold Protein Structure Database

More...AlphaFoldDBi		Q92696

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		Q92696

Database of comparative protein structure models

More...ModBasei		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati44 – 78PFTA 1Add BLAST35
Repeati88 – 122PFTA 2Add BLAST35
Repeati124 – 158PFTA 3Add BLAST35
Repeati159 – 193PFTA 4Add BLAST35
Repeati207 – 241PFTA 5Add BLAST35
Repeati363 – 397PFTA 6Add BLAST35
Repeati442 – 463LRR 1Add BLAST22
Repeati464 – 486LRR 2Add BLAST23
Repeati487 – 508LRR 3Add BLAST22
Repeati509 – 530LRR 4Add BLAST22
Repeati534 – 555LRR 5Add BLAST22

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the protein prenyltransferase subunit alpha family.Curated

Keywords - Domaini

Leucine-rich repeat, Repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG0529, Eukaryota

Ensembl GeneTree

More...GeneTreei		ENSGT00550000075121

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		Q92696

Identification of Orthologs from Complete Genome Data

More...OMAi		YNAWHHR

Database of Orthologous Groups

More...OrthoDBi		1527547at2759

Database for complete collections of gene phylogenies

More...PhylomeDBi		Q92696

TreeFam database of animal gene trees

More...TreeFami		TF315057

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		3.80.10.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR001611, Leu-rich_rpt
IPR032675, LRR_dom_sf
IPR002088, Prenyl_trans_a
IPR036254, RabGGT_asu_insert-dom_sf
IPR009087, RabGGT_asu_insert-domain
IPR032955, RabGGTase_alpha

The PANTHER Classification System

More...PANTHERi		PTHR11129:SF2, PTHR11129:SF2, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF01239, PPTA, 5 hits
PF07711, RabGGT_insert, 1 hit

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF49594, SSF49594, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS51450, LRR, 5 hits
PS51147, PFTA, 6 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All

Q92696-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MHGRLKVKTS EEQAEAKRLE REQKLKLYQS ATQAVFQKRQ AGELDESVLE 
        60         70         80         90        100
LTSQILGANP DFATLWNCRR EVLQQLETQK SPEELAALVK AELGFLESCL 
       110        120        130        140        150
RVNPKSYGTW HHRCWLLGRL PEPNWTRELE LCARFLEVDE RNFHCWDYRR 
       160        170        180        190        200
FVATQAAVPP AEELAFTDSL ITRNFSNYSS WHYRSCLLPQ LHPQPDSGPQ 
       210        220        230        240        250
GRLPEDVLLK ELELVQNAFF TDPNDQSAWF YHRWLLGRAD PQDALRCLHV 
       260        270        280        290        300
SRDEACLTVS FSRPLLVGSR MEILLLMVDD SPLIVEWRTP DGRNRPSHVW 
       310        320        330        340        350
LCDLPAASLN DQLPQHTFRV IWTAGDVQKE CVLLKGRQEG WCRDSTTDEQ 
       360        370        380        390        400
LFRCELSVEK STVLQSELES CKELQELEPE NKWCLLTIIL LMRALDPLLY 
       410        420        430        440        450
EKETLQYFQT LKAVDPMRAT YLDDLRSKFL LENSVLKMEY AEVRVLHLAH 
       460        470        480        490        500
KDLTVLCHLE QLLLVTHLDL SHNRLRTLPP ALAALRCLEV LQASDNAIES 
       510        520        530        540        550
LDGVTNLPRL QELLLCNNRL QQPAVLQPLA SCPRLVLLNL QGNPLCQAVG 
       560 
ILEQLAELLP SVSSVLT
Length:567
Mass (Da):65,072
Last modified:July 15, 1999 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iABA1AFFC8A496C5F
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
H0YLH3H0YLH3_HUMAN
Geranylgeranyl transferase type-2 s...
RABGGTA
424Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
H0YKP6H0YKP6_HUMAN
Geranylgeranyl transferase type-2 s...
RABGGTA
73Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
H0YLG7H0YLG7_HUMAN
Geranylgeranyl transferase type-2 s...
RABGGTA
176Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
H0YKZ8H0YKZ8_HUMAN
Geranylgeranyl transferase type-2 s...
RABGGTA
136Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
H0YMG5H0YMG5_HUMAN
Geranylgeranyl transferase type-2 s...
RABGGTA
175Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes natural variant(s) of the protein sequence.<p><a href='/help/variant' target='_top'>More...</a></p>Natural variantiVAR_020406420T → A1 PublicationCorresponds to variant dbSNP:rs729421Ensembl.1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
Y08200 mRNA Translation: CAA69382.1
AK291347 mRNA Translation: BAF84036.1
AK292613 mRNA Translation: BAF85302.1
CH471078 Genomic DNA Translation: EAW66044.1
CH471078 Genomic DNA Translation: EAW66045.1
BC003093 mRNA Translation: AAH03093.1

The Consensus CDS (CCDS) project

More...CCDSi		CCDS45088.1

Protein sequence database of the Protein Information Resource

More...PIRi		JC5538

NCBI Reference Sequences

More...RefSeqi		NP_004572.3, NM_004581.5
NP_878256.1, NM_182836.2

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENST00000216840.11; ENSP00000216840.6; ENSG00000100949.15
ENST00000399409.7; ENSP00000382341.3; ENSG00000100949.15
ENST00000644383.1; ENSP00000494636.1; ENSG00000285193.1
ENST00000646658.1; ENSP00000496595.1; ENSG00000285193.1

Database of genes from NCBI RefSeq genomes

More...GeneIDi		5875

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		hsa:5875

Matched Annotation from NCBI and EMBL-EBI (MANE) - Phase one

More...MANE-Selecti		ENST00000216840.11; ENSP00000216840.6; NM_182836.3; NP_878256.1

UCSC genome browser

More...UCSCi		uc001wof.5, human

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y08200 mRNA Translation: CAA69382.1
AK291347 mRNA Translation: BAF84036.1
AK292613 mRNA Translation: BAF85302.1
CH471078 Genomic DNA Translation: EAW66044.1
CH471078 Genomic DNA Translation: EAW66045.1
BC003093 mRNA Translation: AAH03093.1
CCDSiCCDS45088.1
PIRiJC5538
RefSeqiNP_004572.3, NM_004581.5
NP_878256.1, NM_182836.2

3D structure databases

AlphaFoldDBiQ92696
SMRiQ92696
ModBaseiSearch...

Protein-protein interaction databases

BioGRIDi111813, 75 interactors
ComplexPortaliCPX-2919, Protein geranylgeranyltransferase type II complex
CORUMiQ92696
IntActiQ92696, 23 interactors
MINTiQ92696
STRINGi9606.ENSP00000382341

Chemistry databases

ChEMBLiCHEMBL5249
DrugBankiDB07780, Farnesyl diphosphate
DB07841, Geranylgeranyl diphosphate
DB04464, N-Formylmethionine

PTM databases

GlyGeniQ92696, 1 site, 1 O-linked glycan (1 site)
iPTMnetiQ92696
PhosphoSitePlusiQ92696

Genetic variation databases

BioMutaiRABGGTA
DMDMi6093707

Proteomic databases

EPDiQ92696
jPOSTiQ92696
MassIVEiQ92696
MaxQBiQ92696
PaxDbiQ92696
PeptideAtlasiQ92696
PRIDEiQ92696
ProteomicsDBi75413

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...Antibodypediai		22812, 89 antibodies from 22 providers

The DNASU plasmid repository

More...DNASUi		5875

Genome annotation databases

EnsembliENST00000216840.11; ENSP00000216840.6; ENSG00000100949.15
ENST00000399409.7; ENSP00000382341.3; ENSG00000100949.15
ENST00000644383.1; ENSP00000494636.1; ENSG00000285193.1
ENST00000646658.1; ENSP00000496595.1; ENSG00000285193.1
GeneIDi5875
KEGGihsa:5875
MANE-SelectiENST00000216840.11; ENSP00000216840.6; NM_182836.3; NP_878256.1
UCSCiuc001wof.5, human

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		5875
DisGeNETi5875

GeneCards: human genes, protein and diseases

More...GeneCardsi		RABGGTA
HGNCiHGNC:9795, RABGGTA
HPAiENSG00000100949, Tissue enhanced (esophagus)
MIMi601905, gene
neXtProtiNX_Q92696
OpenTargetsiENSG00000100949
PharmGKBiPA34156
VEuPathDBiHostDB:ENSG00000100949

GenAtlas: human gene database

More...GenAtlasi		Search...

Phylogenomic databases

eggNOGiKOG0529, Eukaryota
GeneTreeiENSGT00550000075121
InParanoidiQ92696
OMAiYNAWHHR
OrthoDBi1527547at2759
PhylomeDBiQ92696
TreeFamiTF315057

Enzyme and pathway databases

PathwayCommonsiQ92696
ReactomeiR-HSA-6803205, TP53 regulates transcription of several additional cell death genes whose specific roles in p53-dependent apoptosis remain uncertain
R-HSA-8873719, RAB geranylgeranylation
SignaLinkiQ92696
SIGNORiQ92696

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...BioGRID-ORCSi		5875, 668 hits in 1085 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...ChiTaRSi		RABGGTA, human

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

More...GenomeRNAii		5875
PharosiQ92696, Tdark

Protein Ontology

More...PROi		PR:Q92696
RNActiQ92696, protein

The Stanford Online Universal Resource for Clones and ESTs

More...SOURCEi		Search...

Gene expression databases

BgeeiENSG00000100949, Expressed in lower esophagus mucosa and 212 other tissues
ExpressionAtlasiQ92696, baseline and differential
GenevisibleiQ92696, HS

Family and domain databases

Gene3Di3.80.10.10, 1 hit
InterProiView protein in InterPro
IPR001611, Leu-rich_rpt
IPR032675, LRR_dom_sf
IPR002088, Prenyl_trans_a
IPR036254, RabGGT_asu_insert-dom_sf
IPR009087, RabGGT_asu_insert-domain
IPR032955, RabGGTase_alpha
PANTHERiPTHR11129:SF2, PTHR11129:SF2, 1 hit
PfamiView protein in Pfam
PF01239, PPTA, 5 hits
PF07711, RabGGT_insert, 1 hit
SUPFAMiSSF49594, SSF49594, 1 hit
PROSITEiView protein in PROSITE
PS51450, LRR, 5 hits
PS51147, PFTA, 6 hits

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiPGTA_HUMAN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q92696
Secondary accession number(s): A8K5N2, D3DS69
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: July 15, 1999
Last modified: May 25, 2022
This is version 190 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Human chromosome 14
    Human chromosome 14: entries, gene names and cross-references to MIM
  2. Human entries with genetic variants
    List of human entries with genetic variants
  3. Human variants curated from literature reports
    Index of human variants curated from literature reports
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. SIMILARITY comments
    Index of protein domains and families
UniProt is an ELIXIR core data resource
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