UniProtKB - Q925F4 (RNF37_MOUSE)
Protein
RING finger protein 37
Gene
Ubox5
Organism
Mus musculus (Mouse)
Status
Functioni
May have a ubiquitin-protein ligase activity acting as an E3 ubiquitin-protein ligase or as a ubiquitin-ubiquitin ligase promoting elongation of ubiquitin chains on substrates.1 Publication
Catalytic activityi
- S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.1 Publication EC:2.3.2.27
: protein ubiquitination Pathwayi
This protein is involved in the pathway protein ubiquitination, which is part of Protein modification.1 PublicationView all proteins of this organism that are known to be involved in the pathway protein ubiquitination and in Protein modification.
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Zinc fingeri | 481 – 526 | RING-typePROSITE-ProRule annotationAdd BLAST | 46 |
GO - Molecular functioni
- metal ion binding Source: UniProtKB-KW
- ubiquitin protein ligase activity Source: MGI
- ubiquitin protein ligase binding Source: UniProtKB
- ubiquitin-ubiquitin ligase activity Source: MGI
GO - Biological processi
- protein polyubiquitination Source: MGI
Keywordsi
Molecular function | Transferase |
Biological process | Ubl conjugation pathway |
Ligand | Metal-binding, Zinc |
Enzyme and pathway databases
Reactomei | R-MMU-983168, Antigen processing: Ubiquitination & Proteasome degradation |
UniPathwayi | UPA00143 |
Names & Taxonomyi
Protein namesi | Recommended name: RING finger protein 37Curated (EC:2.3.2.271 Publication)Alternative name(s): RING-type E3 ubiquitin transferase RNF37Curated U-box domain-containing protein 5Imported UbcM4-interacting protein 51 Publication |
Gene namesi | Name:Ubox5 Synonyms:Rnf37Curated, Uip51 Publication |
Organismi | Mus musculus (Mouse) |
Taxonomic identifieri | 10090 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus |
Proteomesi |
|
Organism-specific databases
MGIi | MGI:2154658, Ubox5 |
Subcellular locationi
Nucleus
- Nucleus 1 Publication
Note: Enriched in nuclear bodies.By similarity
Nucleus
- nuclear body Source: UniProtKB
- nucleoplasm Source: MGI
- nucleus Source: MGI
Other locations
- focal adhesion Source: MGI
Keywords - Cellular componenti
NucleusPathology & Biotechi
Mutagenesis
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Mutagenesisi | 292 | C → A: No effect on E3 ubiquitin-protein ligase activity. 1 Publication | 1 | |
Mutagenesisi | 306 | P → A: Loss of E3 ubiquitin-protein ligase activity. 1 Publication | 1 |
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000056077 | 1 – 539 | RING finger protein 37Add BLAST | 539 |
Proteomic databases
MaxQBi | Q925F4 |
PaxDbi | Q925F4 |
PRIDEi | Q925F4 |
PTM databases
PhosphoSitePlusi | Q925F4 |
Expressioni
Tissue specificityi
Expressed in testis and placenta.1 Publication
Developmental stagei
Expressed in embryos at 14.5 dpc.1 Publication
Gene expression databases
Bgeei | ENSMUSG00000027300, Expressed in head and 278 other tissues |
ExpressionAtlasi | Q925F4, baseline and differential |
Genevisiblei | Q925F4, MM |
Interactioni
Subunit structurei
Interacts with UBE2L3.
Interacts with VCP.
2 PublicationsGO - Molecular functioni
- ubiquitin protein ligase binding Source: UniProtKB
Protein-protein interaction databases
BioGRIDi | 228291, 7 interactors |
STRINGi | 10090.ENSMUSP00000028761 |
Miscellaneous databases
RNActi | Q925F4, protein |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 258 – 338 | U-boxAdd BLAST | 81 |
Domaini
The U-box domain mediates interaction with E2 ubiquitin ligases and is required for the ubiquitin-protein ligase activity.By similarity1 Publication
Zinc finger
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Zinc fingeri | 481 – 526 | RING-typePROSITE-ProRule annotationAdd BLAST | 46 |
Keywords - Domaini
Zinc-fingerPhylogenomic databases
eggNOGi | KOG2042, Eukaryota |
GeneTreei | ENSGT00510000049555 |
HOGENOMi | CLU_038691_0_0_1 |
InParanoidi | Q925F4 |
OMAi | DSVTFCY |
OrthoDBi | 725845at2759 |
PhylomeDBi | Q925F4 |
TreeFami | TF329105 |
Family and domain databases
CDDi | cd16660, RING-Ubox_RNF37, 1 hit |
Gene3Di | 3.30.40.10, 2 hits |
InterProi | View protein in InterPro IPR039925, RNF37_RING-Ubox IPR039847, Ubox5 IPR003613, Ubox_domain IPR001841, Znf_RING IPR013083, Znf_RING/FYVE/PHD IPR017907, Znf_RING_CS |
PANTHERi | PTHR13492, PTHR13492, 1 hit |
Pfami | View protein in Pfam PF04564, U-box, 1 hit PF14634, zf-RING_5, 1 hit |
SMARTi | View protein in SMART SM00504, Ubox, 1 hit |
PROSITEi | View protein in PROSITE PS51698, U_BOX, 1 hit PS00518, ZF_RING_1, 1 hit PS50089, ZF_RING_2, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All
Q925F4-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MVVNLCLPQF RPRIHCNKVS ADGYEVENLI SEDLIKRSHG FRTEYFIRPP
60 70 80 90 100
IYVTVSFPFN VEICRVNIDL TTGGYQNVSG LELYTSALSS RVSQDAQDCW
110 120 130 140 150
TTGPVETSVP DKEAFTLVGK VLLKNQNHVV FSHRGFKARP PFSPMEVTLL
160 170 180 190 200
SPAVVAQELW NKGALSLSHV AHLKIGITHV TGSGISCIKR LEVWGQPART
210 220 230 240 250
CSQEVINSVL LIASESLPQD LDLHAPALPM ESDCDPGGQS ESQHSPCTLQ
260 270 280 290 300
DMSEVESDVP EEFLDPITLE IMPCPMLLPS GKVIDQSTLE KCNLSEAAWG
310 320 330 340 350
RVPSDPFTGL AFTPQSQPLP HPSLKARIDR FLLQHSISGC RLLGRAQTPS
360 370 380 390 400
AMTPSVITLP SRKRKTEQAE HSSHYSLGMS ASSSATSPLF SPTTSEPTAK
410 420 430 440 450
KMKATSELGL TDMDCSAGPV SHEQKLAQSL EIALTSTLGS MPSFTARLTK
460 470 480 490 500
GQLQLGTRGS SACRRPASSS EHPRSVSGPE CASCKQAFSS YSTNEPVYQL
510 520 530
PCGHLLCRPC LSEKQRSQPM MCTACRQPVT SQDVLRVHF
Computationally mapped potential isoform sequencesi
There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basketF2Z402 | F2Z402_MOUSE | RING finger protein 37 | Ubox5 | 553 | Annotation score: |
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 75 | Y → C in AAH25068 (PubMed:15489334).Curated | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AF360997 mRNA Translation: AAK51467.1 BC025068 mRNA Translation: AAH25068.1 |
CCDSi | CCDS16747.1 |
RefSeqi | NP_001242922.1, NM_001255993.1 NP_001242923.1, NM_001255994.1 NP_542129.2, NM_080562.5 |
Genome annotation databases
Ensembli | ENSMUST00000028761; ENSMUSP00000028761; ENSMUSG00000027300 |
GeneIDi | 140629 |
KEGGi | mmu:140629 |
UCSCi | uc008mji.3, mouse |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AF360997 mRNA Translation: AAK51467.1 BC025068 mRNA Translation: AAH25068.1 |
CCDSi | CCDS16747.1 |
RefSeqi | NP_001242922.1, NM_001255993.1 NP_001242923.1, NM_001255994.1 NP_542129.2, NM_080562.5 |
3D structure databases
SMRi | Q925F4 |
ModBasei | Search... |
Protein-protein interaction databases
BioGRIDi | 228291, 7 interactors |
STRINGi | 10090.ENSMUSP00000028761 |
PTM databases
PhosphoSitePlusi | Q925F4 |
Proteomic databases
MaxQBi | Q925F4 |
PaxDbi | Q925F4 |
PRIDEi | Q925F4 |
Protocols and materials databases
Antibodypediai | 23444, 192 antibodies |
Genome annotation databases
Ensembli | ENSMUST00000028761; ENSMUSP00000028761; ENSMUSG00000027300 |
GeneIDi | 140629 |
KEGGi | mmu:140629 |
UCSCi | uc008mji.3, mouse |
Organism-specific databases
CTDi | 22888 |
MGIi | MGI:2154658, Ubox5 |
Phylogenomic databases
eggNOGi | KOG2042, Eukaryota |
GeneTreei | ENSGT00510000049555 |
HOGENOMi | CLU_038691_0_0_1 |
InParanoidi | Q925F4 |
OMAi | DSVTFCY |
OrthoDBi | 725845at2759 |
PhylomeDBi | Q925F4 |
TreeFami | TF329105 |
Enzyme and pathway databases
UniPathwayi | UPA00143 |
Reactomei | R-MMU-983168, Antigen processing: Ubiquitination & Proteasome degradation |
Miscellaneous databases
BioGRID-ORCSi | 140629, 1 hit in 17 CRISPR screens |
ChiTaRSi | Ubox5, mouse |
PROi | PR:Q925F4 |
RNActi | Q925F4, protein |
SOURCEi | Search... |
Gene expression databases
Bgeei | ENSMUSG00000027300, Expressed in head and 278 other tissues |
ExpressionAtlasi | Q925F4, baseline and differential |
Genevisiblei | Q925F4, MM |
Family and domain databases
CDDi | cd16660, RING-Ubox_RNF37, 1 hit |
Gene3Di | 3.30.40.10, 2 hits |
InterProi | View protein in InterPro IPR039925, RNF37_RING-Ubox IPR039847, Ubox5 IPR003613, Ubox_domain IPR001841, Znf_RING IPR013083, Znf_RING/FYVE/PHD IPR017907, Znf_RING_CS |
PANTHERi | PTHR13492, PTHR13492, 1 hit |
Pfami | View protein in Pfam PF04564, U-box, 1 hit PF14634, zf-RING_5, 1 hit |
SMARTi | View protein in SMART SM00504, Ubox, 1 hit |
PROSITEi | View protein in PROSITE PS51698, U_BOX, 1 hit PS00518, ZF_RING_1, 1 hit PS50089, ZF_RING_2, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | RNF37_MOUSE | |
Accessioni | Q925F4Primary (citable) accession number: Q925F4 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | June 6, 2002 |
Last sequence update: | June 6, 2002 | |
Last modified: | December 2, 2020 | |
This is version 143 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Chordata Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- MGD cross-references
Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot - PATHWAY comments
Index of metabolic and biosynthesis pathways