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Protein

Nucleosome assembly protein 1-like 3

Gene

Nap1l3

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleosome assembly protein 1-like 3
Gene namesi
Name:Nap1l3
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome X

Organism-specific databases

RGDi620990 Nap1l3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002362121 – 536Nucleosome assembly protein 1-like 3Add BLAST536

Proteomic databases

PaxDbiQ924R9
PRIDEiQ924R9

Expressioni

Gene expression databases

BgeeiENSRNOG00000029087 Expressed in 9 organ(s), highest expression level in Ammon's horn
GenevisibleiQ924R9 RN

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000048930

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi24 – 75Ser-richAdd BLAST52
Compositional biasi157 – 281Glu-richAdd BLAST125

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG1507 Eukaryota
ENOG410XQN9 LUCA
GeneTreeiENSGT00480000042668
HOGENOMiHOG000171827
HOVERGENiHBG052653
InParanoidiQ924R9
KOiK11281
OMAiGKDYGNR
OrthoDBiEOG091G0B87
PhylomeDBiQ924R9
TreeFamiTF314349

Family and domain databases

InterProiView protein in InterPro
IPR037231 NAP-like_sf
IPR002164 NAP_family
PANTHERiPTHR11875 PTHR11875, 1 hit
PfamiView protein in Pfam
PF00956 NAP, 1 hit
SUPFAMiSSF143113 SSF143113, 1 hit

Sequencei

Sequence statusi: Complete.

Q924R9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAEADPKMVT EPAAQGVAEE AMASSACDSG DESDSNSSSS TTSCGSTGSS
60 70 80 90 100
SSSSSSSSSS SSSSSGSSGS SSNGSHLHQK KRVPGPSRRA QRRPSGKLFM
110 120 130 140 150
DKLPQAVRNR VQALRNIQNE CDKVDTLFLR AIHDLERKYA ELNKPLYDKR
160 170 180 190 200
FQIINAEYEP TEEECEWNSE EEFSGDEEMQ DDTPNEMPPL EGEEEEEIGK
210 220 230 240 250
ENTEVKEEVK DVPEEVPEAK VEEEEAPKET SEVKTEEKEI PKEGPEEKAE
260 270 280 290 300
EQESSKEFPE VKVEEKTDST DCIDIAPEEK EDLKDVTQAN AEYTDQPTED
310 320 330 340 350
STPRAPVREA QKRVPETRPE ERVNIKRARK GKPKKEDPPR GIPDYWLTVL
360 370 380 390 400
KNVDKLGPMI QKCDEPILKF LSDVSLKFSN PGQPISYTFE FHFLPNPYFR
410 420 430 440 450
NELLMKTYII RSKPDHYDPF FAWGWEIEEC KGCKIDWRRG KDVTVTTRSR
460 470 480 490 500
PAITGEIEVQ PRVVPNASFF NFFSPPEIPL IGKLEPKEDA ILDEDFEIGQ
510 520 530
ILHDNVILKS IYYFTGEIND PYYHDFRDYG NRKYYK
Length:536
Mass (Da):60,891
Last modified:December 1, 2001 - v1
Checksum:iCCFC2AED037470DF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB067678 mRNA Translation: BAB62331.1
BC101932 mRNA Translation: AAI01933.1
RefSeqiNP_596893.1, NM_133402.2
UniGeneiRn.27765

Genome annotation databases

EnsembliENSRNOT00000049956; ENSRNOP00000048930; ENSRNOG00000029087
GeneIDi170914
KEGGirno:170914
UCSCiRGD:620990 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB067678 mRNA Translation: BAB62331.1
BC101932 mRNA Translation: AAI01933.1
RefSeqiNP_596893.1, NM_133402.2
UniGeneiRn.27765

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000048930

Proteomic databases

PaxDbiQ924R9
PRIDEiQ924R9

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000049956; ENSRNOP00000048930; ENSRNOG00000029087
GeneIDi170914
KEGGirno:170914
UCSCiRGD:620990 rat

Organism-specific databases

CTDi4675
RGDi620990 Nap1l3

Phylogenomic databases

eggNOGiKOG1507 Eukaryota
ENOG410XQN9 LUCA
GeneTreeiENSGT00480000042668
HOGENOMiHOG000171827
HOVERGENiHBG052653
InParanoidiQ924R9
KOiK11281
OMAiGKDYGNR
OrthoDBiEOG091G0B87
PhylomeDBiQ924R9
TreeFamiTF314349

Miscellaneous databases

PROiPR:Q924R9

Gene expression databases

BgeeiENSRNOG00000029087 Expressed in 9 organ(s), highest expression level in Ammon's horn
GenevisibleiQ924R9 RN

Family and domain databases

InterProiView protein in InterPro
IPR037231 NAP-like_sf
IPR002164 NAP_family
PANTHERiPTHR11875 PTHR11875, 1 hit
PfamiView protein in Pfam
PF00956 NAP, 1 hit
SUPFAMiSSF143113 SSF143113, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiNP1L3_RAT
AccessioniPrimary (citable) accession number: Q924R9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 30, 2006
Last sequence update: December 1, 2001
Last modified: November 7, 2018
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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Main funding by: National Institutes of Health

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