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Entry version 120 (29 Sep 2021)
Sequence version 1 (01 Feb 1997)
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Protein

Meiotic recombination protein rec11

Gene

rec11

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

  • chromatin binding Source: GO_Central

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processMeiosis

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...
Reactomei
R-SPO-2470946, Cohesin Loading onto Chromatin
R-SPO-2500257, Resolution of Sister Chromatid Cohesion
R-SPO-3108214, SUMOylation of DNA damage response and repair proteins

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Meiotic recombination protein rec11
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:rec11
ORF Names:SPCC4E9.01c, SPCC550.16c
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri284812 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002485 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome III

Organism-specific databases

Schizosaccharomyces pombe database

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PomBasei
SPCC4E9.01c, rec11

Eukaryotic Pathogen, Vector and Host Database Resources

More...
VEuPathDBi
FungiDB:SPCC4E9.01c

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000972211 – 923Meiotic recombination protein rec11Add BLAST923

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q92380

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q92380

SwissPalm database of S-palmitoylation events

More...
SwissPalmi
Q92380

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

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BioGRIDi
275433, 29 interactors

STRING: functional protein association networks

More...
STRINGi
4896.SPCC4E9.01c.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini278 – 365SCDPROSITE-ProRule annotationAdd BLAST88

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG2011, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_316210_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q92380

Identification of Orthologs from Complete Genome Data

More...
OMAi
EICRYDI

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q92380

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.25.10.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR011989, ARM-like
IPR016024, ARM-type_fold
IPR039662, Cohesin_Scc3/SA
IPR020839, SCD
IPR013721, STAG

The PANTHER Classification System

More...
PANTHERi
PTHR11199, PTHR11199, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF08514, STAG, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48371, SSF48371, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51425, SCD, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q92380-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRFEFESDAS SHLNEVLTEL ESVELENVEY EGPSLQNVSI CASPSEKKRK
60 70 80 90 100
WGTQDEFSLT ENEENNEIET NEEMHVNSHD YAFPQEFFLK LLDIDMPLEQ
110 120 130 140 150
LSQHYFEDYK SNSADFMLTF INFALVASGC QPFVTNFDVQ DVDSIPETLS
160 170 180 190 200
QVNRSSFQKS SCAYTDYLYT SNSKEAKTVR IRFQLFLVEF ISKVYVEDAF
210 220 230 240 250
LGDSFMETTK AWIFTMTTSP WMLVRHTATT ICCDIMRCLC LIVNKLSEKS
260 270 280 290 300
NQTAEILVLR DLTSRFIDMI HDICDSVLFS RIHDIRASIR IVCVTALYDC
310 320 330 340 350
CQLLPTYLIN RNLIRHSGWG LSDAESQIRK ISLKIIDYLS SHEPEKDQDF
360 370 380 390 400
VVDFLDRFSL RIVEICRYDI DSVRSVALKT CEKLMEKISL NGKCINIVSS
410 420 430 440 450
CIFDGKPQNR ISTMRILVAH TNERYANYCE AKTATISLSK LLRREKIPLL
460 470 480 490 500
VSSFESLFKM NALLFILEQG FESWFRDSSD HIFSRVKDDD KFVYQSQENN
510 520 530 540 550
FYDADFIREY DMNNHRQQLI EESMHSIHTN SQLLASWEDV AKLLLYDRFD
560 570 580 590 600
AKDTNSVLNP CIPSNAVIEF SSIYLHYFAT HISKRSKKPG KRLEDEVVNQ
610 620 630 640 650
QQAMLRNLPL LLQKYRESCV SSYFFIKCVE QIPDELLYKR EFHKDFSKLY
660 670 680 690 700
KEILDIFNST TVNFLMILCS RFFHRLAVNK VVQEDILFAI DNVYNDLAES
710 720 730 740 750
LHEQLNAYIQ RKKINKKNQL NGNDETQNLV LALNKFGCFA KEMVCLRDVN
760 770 780 790 800
DWNIKLSEKL CEICSLEVGP IVCYSSLKVL FLLLLSDMRD RNCIFTNIFL
810 820 830 840 850
KAAKVAKQKN GNSFLSKVFI TITMLTLFLG SKANNWDINF SDDDLKLMNE
860 870 880 890 900
EEIMEQIETF KAWSMKFKEK SSGNPSYFFS PEDTEEKELW NNLFEDWYPN
910 920
RARDPGTLSH LVKGLKETAD HLS
Length:923
Mass (Da):107,419
Last modified:February 1, 1997 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i665223F9BF84D89D
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
U70737 Genomic DNA Translation: AAC49663.1
CU329672 Genomic DNA Translation: CAA19120.1

Protein sequence database of the Protein Information Resource

More...
PIRi
T41350

NCBI Reference Sequences

More...
RefSeqi
NP_588108.3, NM_001023099.3

Genome annotation databases

Ensembl fungal genome annotation project

More...
EnsemblFungii
SPCC4E9.01c.1; SPCC4E9.01c.1:pep; SPCC4E9.01c

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
2538852

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
spo:SPCC4E9.01c

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U70737 Genomic DNA Translation: AAC49663.1
CU329672 Genomic DNA Translation: CAA19120.1
PIRiT41350
RefSeqiNP_588108.3, NM_001023099.3

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

BioGRIDi275433, 29 interactors
STRINGi4896.SPCC4E9.01c.1

PTM databases

iPTMnetiQ92380
SwissPalmiQ92380

Proteomic databases

PaxDbiQ92380

Genome annotation databases

EnsemblFungiiSPCC4E9.01c.1; SPCC4E9.01c.1:pep; SPCC4E9.01c
GeneIDi2538852
KEGGispo:SPCC4E9.01c

Organism-specific databases

PomBaseiSPCC4E9.01c, rec11
VEuPathDBiFungiDB:SPCC4E9.01c

Phylogenomic databases

eggNOGiKOG2011, Eukaryota
HOGENOMiCLU_316210_0_0_1
InParanoidiQ92380
OMAiEICRYDI
PhylomeDBiQ92380

Enzyme and pathway databases

ReactomeiR-SPO-2470946, Cohesin Loading onto Chromatin
R-SPO-2500257, Resolution of Sister Chromatid Cohesion
R-SPO-3108214, SUMOylation of DNA damage response and repair proteins

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q92380

Family and domain databases

Gene3Di1.25.10.10, 1 hit
InterProiView protein in InterPro
IPR011989, ARM-like
IPR016024, ARM-type_fold
IPR039662, Cohesin_Scc3/SA
IPR020839, SCD
IPR013721, STAG
PANTHERiPTHR11199, PTHR11199, 1 hit
PfamiView protein in Pfam
PF08514, STAG, 1 hit
SUPFAMiSSF48371, SSF48371, 1 hit
PROSITEiView protein in PROSITE
PS51425, SCD, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiREC11_SCHPO
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q92380
Secondary accession number(s): Q7LL03, Q9USJ0
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: September 29, 2021
This is version 120 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
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