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UniProtKB - Q920I9 (WDR7_MOUSE)

Entry version 146 (29 Sep 2021)
Sequence version 3 (27 Jul 2011)
Previous versions | rss
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Protein

WD repeat-containing protein 7

Gene

Wdr7

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

Complete GO annotation on QuickGO ...

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
WD repeat-containing protein 7
Alternative name(s):
TGF-beta resistance-associated protein TRAG
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Wdr7
Synonyms:Kiaa0541, Trag
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 18

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...MGIi		MGI:1860197, Wdr7

Eukaryotic Pathogen, Vector and Host Database Resources

More...VEuPathDBi		HostDB:ENSMUSG00000040560

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000513541 – 1489WD repeat-containing protein 7Add BLAST1489

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei935PhosphoserineCombined sources1
Modified residuei1455PhosphoserineCombined sources1

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - PTMi

Phosphoprotein

Proteomic databases

jPOST - Japan Proteome Standard Repository/Database

More...jPOSTi		Q920I9

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		Q920I9

PeptideAtlas

More...PeptideAtlasi		Q920I9

PRoteomics IDEntifications database

More...PRIDEi		Q920I9

ProteomicsDB: a multi-organism proteome resource

More...ProteomicsDBi		297552 [Q920I9-1]
297553 [Q920I9-2]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		Q920I9

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...PhosphoSitePlusi		Q920I9

SwissPalm database of S-palmitoylation events

More...SwissPalmi		Q920I9

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSMUSG00000040560, Expressed in lumbar subsegment of spinal cord and 264 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...ExpressionAtlasi		Q920I9, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		Q920I9, MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...BioGRIDi		222341, 11 interactors

Protein interaction database and analysis system

More...IntActi		Q920I9, 4 interactors

Molecular INTeraction database

More...MINTi		Q920I9

STRING: functional protein association networks

More...STRINGi		10090.ENSMUSP00000072509

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...RNActi		Q920I9, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati17 – 56WD 1Add BLAST40
Repeati62 – 104WD 2Add BLAST43
Repeati156 – 199WD 3Add BLAST44
Repeati324 – 366WD 4Add BLAST43
Repeati404 – 443WD 5Add BLAST40
Repeati462 – 507WD 6Add BLAST46
Repeati558 – 597WD 7Add BLAST40
Repeati1350 – 1389WD 8Add BLAST40
Repeati1391 – 1431WD 9Add BLAST41

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni754 – 783DisorderedSequence analysisAdd BLAST30
Regioni911 – 947DisorderedSequence analysisAdd BLAST37

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi754 – 782Basic and acidic residuesSequence analysisAdd BLAST29
Compositional biasi933 – 947Polar residuesSequence analysisAdd BLAST15

Keywords - Domaini

Repeat, WD repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG4155, Eukaryota

Ensembl GeneTree

More...GeneTreei		ENSGT00940000155301

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_004362_1_0_1

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		Q920I9

Identification of Orthologs from Complete Genome Data

More...OMAi		CEGKAVP

Database of Orthologous Groups

More...OrthoDBi		84170at2759

Database for complete collections of gene phylogenies

More...PhylomeDBi		Q920I9

TreeFam database of animal gene trees

More...TreeFami		TF313196

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		2.130.10.10, 3 hits

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR011047, Quinoprotein_ADH-like_supfam
IPR015943, WD40/YVTN_repeat-like_dom_sf
IPR001680, WD40_repeat
IPR019775, WD40_repeat_CS
IPR036322, WD40_repeat_dom_sf

Pfam protein domain database

More...Pfami		View protein in Pfam
PF00400, WD40, 3 hits

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM00320, WD40, 7 hits

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF50978, SSF50978, 1 hit
SSF50998, SSF50998, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS00678, WD_REPEATS_1, 3 hits
PS50082, WD_REPEATS_2, 4 hits
PS50294, WD_REPEATS_REGION, 3 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 2 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 2 described isoforms and 3 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q920I9-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MAGNSLVLPI VLWGRKAPTH CISSILLTDD GGTIVTGCHD GQICLWDVSV 
        60         70         80         90        100
ELEVNPRALL FGHTASITCL SKACASGDKR YTVSASANGE MCLWDVNDGR 
       110        120        130        140        150
CIEFTKLACT HTGIQFYQFS VGNQQEGRLL CHGHYPEILV VDATSLEVLY 
       160        170        180        190        200
SLVSKISPDW ISSMSIIRSQ RTQEDTVVAL SVTGILKVWI VTSEMSGMQD 
       210        220        230        240        250
TEPIFEEESK PIYCQNCQSI SFCAFTQRSL LVVCSKYWRV FDAGDYSLLC 
       260        270        280        290        300
SGPSENGQTW TGGDFVSADK VIIWTENGQS YIYKLPASCL PASDSFRSDV 
       310        320        330        340        350
GKAVENLIPP VQHSLLDQKD KELVICPPVT RFFYGCKEYL HKLLIQGDSS 
       360        370        380        390        400
GRLNIWNIAD IAEKQEADEG LKMTTCISLQ EAFDKLKPCP AGIIDQLSVI 
       410        420        430        440        450
PNSNEPLKVT ASVYIPAHGR LVCGREDGSI IIVPATQTAI VQLLQGEHML 
       460        470        480        490        500
RRGWPPHRTL RGHRNKVTCL LYPHQVSARY DQRYLISGGV DFSVIIWDIF 
       510        520        530        540        550
SGEMKHIFCV HGGEITQLLV PPENCSARVQ HCICSVASDH SVGLLSLREK 
       560        570        580        590        600
KCIMLASRHL FPIQVIKWRP SDDYLVVGCT DGSVYVWQMD TGALDRCAMG 
       610        620        630        640        650
ITAVEILNAC DEAVPAAVDS LSHPAVNLKQ AMTRRSLAAL KNMAHHKLQT 
       660        670        680        690        700
LATNLLASEA SDKGNLPKYS HNSLMVQAIK TNLTDPDIHV LFFDVEALII 
       710        720        730        740        750
QLLTEEASRP NTALISPENL QKASGSSDKG GSFLTGKRAA VLFQQVKETI 
       760        770        780        790        800
KENIKEHLLD EEEDEEEARR QSREDSDPEY RASKSKPLTL LEYNLTMDTA 
       810        820        830        840        850
KLFMSCLHAW GLNEVLDEVC LDRLGMLKPH CTVSFGLLSR GGHMSLMLPG 
       860        870        880        890        900
YNQAAGKLLH AKAEVGRKLP AAEGVGKGTY TVSRAVTTQH LLSIISLANT 
       910        920        930        940        950
LMSMTNATFI GDHMKKGPTR PPRPGTPDLS KARDSPPPSS NIVQGQIKQA 
       960        970        980        990       1000
AAPVVSARSD ADHSGSDSAS PALPTCFLVN EGWSQLAAMH CVMLPDLLGL 
      1010       1020       1030       1040       1050
ERFRPPLLEM LARRWQDRCL EVREAAQALL LAELRRIEQA GRKETIDTWA 
      1060       1070       1080       1090       1100
PYLPQYMDHV ISPGVTAEAM QTMAAAPDAS GPEAKVQEEE HDLVDDDITA 
      1110       1120       1130       1140       1150
GCLSSVPQMK KISTSYEERR KQATAIVLLG VIGAEFGAEI EPPKLLTRPR 
      1160       1170       1180       1190       1200
SSSQIPEGFG LTSGGSNYSL ARHTCKALTY LLLQPPSPKL PPHSTIRRTA 
      1210       1220       1230       1240       1250
TDLIGRGFTV WEPYMDVSAV LMGLLELCAD AEKQLANITM GLPLSPAADS 
      1260       1270       1280       1290       1300
ARSARHALSL IATARPPAFI TTIAKEVHRH TALAANTQSQ QSIHTTTLAR 
      1310       1320       1330       1340       1350
AKGEILRVIE ILIEKMPTDV VDLLVEVMDI IMYCLEGSLV KKKGLQECFP 
      1360       1370       1380       1390       1400
AICRFYMVSY YERSHRIAVG ARHGSVALYD IRTGKCQTIH GHKGPITAVS 
      1410       1420       1430       1440       1450
FAPDGRYLAT YSNTDSHISF WQMNTSLLGS IGMLNSAPQL RCIKTYQVPP 
      1460       1470       1480 
VQPASPGSHN ALKLARLIWT SNRNVILMAH DGKEHRFMV
Length:1,489
Mass (Da):163,450
Last modified:July 27, 2011 - v3
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i444A5509758C9E63
GO
Isoform 2 (identifier: Q920I9-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     950-981: Missing.

Show »
Length:1,457
Mass (Da):160,325
Checksum:iA7E15F7B333501C7
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A494B9S5A0A494B9S5_MOUSE
WD repeat-containing protein 7
Wdr7
178Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
Q8C711Q8C711_MOUSE
WD repeat-containing protein 7
Wdr7
531Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A494B9P4A0A494B9P4_MOUSE
WD repeat-containing protein 7
Wdr7
488Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti116F → L in BAE32595 (PubMed:16141072).Curated1
Sequence conflicti168R → H in AAL03981 (Ref. 1) Curated1
Sequence conflicti168R → H in AAL03982 (Ref. 1) Curated1
Sequence conflicti566I → V in BAE32595 (PubMed:16141072).Curated1
Sequence conflicti579C → S in AAL03981 (Ref. 1) Curated1
Sequence conflicti579C → S in AAL03982 (Ref. 1) Curated1
Sequence conflicti938P → A in AAL03981 (Ref. 1) Curated1
Sequence conflicti938P → A in AAL03982 (Ref. 1) Curated1
Sequence conflicti938P → A in BAC65586 (PubMed:12693553).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_015275950 – 981Missing in isoform 2. 3 PublicationsAdd BLAST32

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AF188123 mRNA Translation: AAL03981.1
AF188124 mRNA Translation: AAL03982.1
AK154451 mRNA Translation: BAE32595.1
CH466528 Genomic DNA Translation: EDL09715.1
BC125573 mRNA Translation: AAI25574.1
BC137785 mRNA Translation: AAI37786.1
AK122304 mRNA Translation: BAC65586.1

The Consensus CDS (CCDS) project

More...CCDSi		CCDS50307.1 [Q920I9-1]
CCDS89260.1 [Q920I9-2]

NCBI Reference Sequences

More...RefSeqi		NP_001014981.1, NM_001014981.1 [Q920I9-1]
XP_006525540.1, XM_006525477.3

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENSMUST00000072726; ENSMUSP00000072509; ENSMUSG00000040560 [Q920I9-1]
ENSMUST00000236879; ENSMUSP00000158252; ENSMUSG00000040560 [Q920I9-2]

Database of genes from NCBI RefSeq genomes

More...GeneIDi		104082

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		mmu:104082

UCSC genome browser

More...UCSCi		uc008fea.2, mouse [Q920I9-1]
uc008feb.2, mouse [Q920I9-2]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF188123 mRNA Translation: AAL03981.1
AF188124 mRNA Translation: AAL03982.1
AK154451 mRNA Translation: BAE32595.1
CH466528 Genomic DNA Translation: EDL09715.1
BC125573 mRNA Translation: AAI25574.1
BC137785 mRNA Translation: AAI37786.1
AK122304 mRNA Translation: BAC65586.1
CCDSiCCDS50307.1 [Q920I9-1]
CCDS89260.1 [Q920I9-2]
RefSeqiNP_001014981.1, NM_001014981.1 [Q920I9-1]
XP_006525540.1, XM_006525477.3

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Protein-protein interaction databases

BioGRIDi222341, 11 interactors
IntActiQ920I9, 4 interactors
MINTiQ920I9
STRINGi10090.ENSMUSP00000072509

PTM databases

iPTMnetiQ920I9
PhosphoSitePlusiQ920I9
SwissPalmiQ920I9

Proteomic databases

jPOSTiQ920I9
PaxDbiQ920I9
PeptideAtlasiQ920I9
PRIDEiQ920I9
ProteomicsDBi297552 [Q920I9-1]
297553 [Q920I9-2]

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...Antibodypediai		62690, 18 antibodies

The DNASU plasmid repository

More...DNASUi		104082

Genome annotation databases

EnsembliENSMUST00000072726; ENSMUSP00000072509; ENSMUSG00000040560 [Q920I9-1]
ENSMUST00000236879; ENSMUSP00000158252; ENSMUSG00000040560 [Q920I9-2]
GeneIDi104082
KEGGimmu:104082
UCSCiuc008fea.2, mouse [Q920I9-1]
uc008feb.2, mouse [Q920I9-2]

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		23335
MGIiMGI:1860197, Wdr7
VEuPathDBiHostDB:ENSMUSG00000040560

Rodent Unidentified Gene-Encoded large proteins database

More...Rougei		Search...

Phylogenomic databases

eggNOGiKOG4155, Eukaryota
GeneTreeiENSGT00940000155301
HOGENOMiCLU_004362_1_0_1
InParanoidiQ920I9
OMAiCEGKAVP
OrthoDBi84170at2759
PhylomeDBiQ920I9
TreeFamiTF313196

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...BioGRID-ORCSi		104082, 23 hits in 61 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...ChiTaRSi		Wdr7, mouse

Protein Ontology

More...PROi		PR:Q920I9
RNActiQ920I9, protein

The Stanford Online Universal Resource for Clones and ESTs

More...SOURCEi		Search...

Gene expression databases

BgeeiENSMUSG00000040560, Expressed in lumbar subsegment of spinal cord and 264 other tissues
ExpressionAtlasiQ920I9, baseline and differential
GenevisibleiQ920I9, MM

Family and domain databases

Gene3Di2.130.10.10, 3 hits
InterProiView protein in InterPro
IPR011047, Quinoprotein_ADH-like_supfam
IPR015943, WD40/YVTN_repeat-like_dom_sf
IPR001680, WD40_repeat
IPR019775, WD40_repeat_CS
IPR036322, WD40_repeat_dom_sf
PfamiView protein in Pfam
PF00400, WD40, 3 hits
SMARTiView protein in SMART
SM00320, WD40, 7 hits
SUPFAMiSSF50978, SSF50978, 1 hit
SSF50998, SSF50998, 1 hit
PROSITEiView protein in PROSITE
PS00678, WD_REPEATS_1, 3 hits
PS50082, WD_REPEATS_2, 4 hits
PS50294, WD_REPEATS_REGION, 3 hits

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiWDR7_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q920I9
Secondary accession number(s): Q059Q1
, Q3U440, Q80TY3, Q920J0
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: July 27, 2011
Last modified: September 29, 2021
This is version 146 of the entry and version 3 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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