UniProtKB - Q920I9 (WDR7_MOUSE)
Protein
WD repeat-containing protein 7
Gene
Wdr7
Organism
Mus musculus (Mouse)
Status
Names & Taxonomyi
Protein namesi | Recommended name: WD repeat-containing protein 7Alternative name(s): TGF-beta resistance-associated protein TRAG |
Gene namesi | Name:Wdr7 Synonyms:Kiaa0541, Trag |
Organismi | Mus musculus (Mouse) |
Taxonomic identifieri | 10090 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus |
Proteomesi |
|
Organism-specific databases
MGIi | MGI:1860197, Wdr7 |
Subcellular locationi
Other locations
- synaptic vesicle Source: MGI
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000051354 | 1 – 1489 | WD repeat-containing protein 7Add BLAST | 1489 |
Amino acid modifications
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Modified residuei | 935 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1455 | PhosphoserineCombined sources | 1 |
Keywords - PTMi
PhosphoproteinProteomic databases
jPOSTi | Q920I9 |
PaxDbi | Q920I9 |
PeptideAtlasi | Q920I9 |
PRIDEi | Q920I9 |
PTM databases
iPTMneti | Q920I9 |
PhosphoSitePlusi | Q920I9 |
SwissPalmi | Q920I9 |
Expressioni
Gene expression databases
Bgeei | ENSMUSG00000040560, Expressed in lumbar subsegment of spinal cord and 257 other tissues |
ExpressionAtlasi | Q920I9, baseline and differential |
Genevisiblei | Q920I9, MM |
Interactioni
Protein-protein interaction databases
BioGRIDi | 222341, 9 interactors |
IntActi | Q920I9, 5 interactors |
MINTi | Q920I9 |
STRINGi | 10090.ENSMUSP00000072509 |
Miscellaneous databases
RNActi | Q920I9, protein |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Repeati | 17 – 56 | WD 1Add BLAST | 40 | |
Repeati | 62 – 104 | WD 2Add BLAST | 43 | |
Repeati | 156 – 199 | WD 3Add BLAST | 44 | |
Repeati | 324 – 366 | WD 4Add BLAST | 43 | |
Repeati | 404 – 443 | WD 5Add BLAST | 40 | |
Repeati | 462 – 507 | WD 6Add BLAST | 46 | |
Repeati | 558 – 597 | WD 7Add BLAST | 40 | |
Repeati | 1350 – 1389 | WD 8Add BLAST | 40 | |
Repeati | 1391 – 1431 | WD 9Add BLAST | 41 |
Keywords - Domaini
Repeat, WD repeatPhylogenomic databases
eggNOGi | KOG4155, Eukaryota |
GeneTreei | ENSGT00940000155301 |
HOGENOMi | CLU_004362_1_0_1 |
InParanoidi | Q920I9 |
OMAi | CEGKAVP |
OrthoDBi | 84170at2759 |
TreeFami | TF313196 |
Family and domain databases
Gene3Di | 2.130.10.10, 3 hits |
InterProi | View protein in InterPro IPR011047, Quinoprotein_ADH-like_supfam IPR015943, WD40/YVTN_repeat-like_dom_sf IPR001680, WD40_repeat IPR019775, WD40_repeat_CS IPR017986, WD40_repeat_dom IPR036322, WD40_repeat_dom_sf |
Pfami | View protein in Pfam PF00400, WD40, 3 hits |
SMARTi | View protein in SMART SM00320, WD40, 7 hits |
SUPFAMi | SSF50978, SSF50978, 1 hit SSF50998, SSF50998, 1 hit |
PROSITEi | View protein in PROSITE PS00678, WD_REPEATS_1, 3 hits PS50082, WD_REPEATS_2, 4 hits PS50294, WD_REPEATS_REGION, 3 hits |
s (2+)i Sequence
Sequence statusi: Complete.
This entry describes 2 produced by isoformsialternative splicing. AlignAdd to basketThis entry has 2 described isoforms and 3 potential isoforms that are computationally mapped.Show allAlign All
Isoform 1 (identifier: Q920I9-1) [UniParc]FASTAAdd to basket
This isoform has been chosen as the sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. canonicali
10 20 30 40 50
MAGNSLVLPI VLWGRKAPTH CISSILLTDD GGTIVTGCHD GQICLWDVSV
60 70 80 90 100
ELEVNPRALL FGHTASITCL SKACASGDKR YTVSASANGE MCLWDVNDGR
110 120 130 140 150
CIEFTKLACT HTGIQFYQFS VGNQQEGRLL CHGHYPEILV VDATSLEVLY
160 170 180 190 200
SLVSKISPDW ISSMSIIRSQ RTQEDTVVAL SVTGILKVWI VTSEMSGMQD
210 220 230 240 250
TEPIFEEESK PIYCQNCQSI SFCAFTQRSL LVVCSKYWRV FDAGDYSLLC
260 270 280 290 300
SGPSENGQTW TGGDFVSADK VIIWTENGQS YIYKLPASCL PASDSFRSDV
310 320 330 340 350
GKAVENLIPP VQHSLLDQKD KELVICPPVT RFFYGCKEYL HKLLIQGDSS
360 370 380 390 400
GRLNIWNIAD IAEKQEADEG LKMTTCISLQ EAFDKLKPCP AGIIDQLSVI
410 420 430 440 450
PNSNEPLKVT ASVYIPAHGR LVCGREDGSI IIVPATQTAI VQLLQGEHML
460 470 480 490 500
RRGWPPHRTL RGHRNKVTCL LYPHQVSARY DQRYLISGGV DFSVIIWDIF
510 520 530 540 550
SGEMKHIFCV HGGEITQLLV PPENCSARVQ HCICSVASDH SVGLLSLREK
560 570 580 590 600
KCIMLASRHL FPIQVIKWRP SDDYLVVGCT DGSVYVWQMD TGALDRCAMG
610 620 630 640 650
ITAVEILNAC DEAVPAAVDS LSHPAVNLKQ AMTRRSLAAL KNMAHHKLQT
660 670 680 690 700
LATNLLASEA SDKGNLPKYS HNSLMVQAIK TNLTDPDIHV LFFDVEALII
710 720 730 740 750
QLLTEEASRP NTALISPENL QKASGSSDKG GSFLTGKRAA VLFQQVKETI
760 770 780 790 800
KENIKEHLLD EEEDEEEARR QSREDSDPEY RASKSKPLTL LEYNLTMDTA
810 820 830 840 850
KLFMSCLHAW GLNEVLDEVC LDRLGMLKPH CTVSFGLLSR GGHMSLMLPG
860 870 880 890 900
YNQAAGKLLH AKAEVGRKLP AAEGVGKGTY TVSRAVTTQH LLSIISLANT
910 920 930 940 950
LMSMTNATFI GDHMKKGPTR PPRPGTPDLS KARDSPPPSS NIVQGQIKQA
960 970 980 990 1000
AAPVVSARSD ADHSGSDSAS PALPTCFLVN EGWSQLAAMH CVMLPDLLGL
1010 1020 1030 1040 1050
ERFRPPLLEM LARRWQDRCL EVREAAQALL LAELRRIEQA GRKETIDTWA
1060 1070 1080 1090 1100
PYLPQYMDHV ISPGVTAEAM QTMAAAPDAS GPEAKVQEEE HDLVDDDITA
1110 1120 1130 1140 1150
GCLSSVPQMK KISTSYEERR KQATAIVLLG VIGAEFGAEI EPPKLLTRPR
1160 1170 1180 1190 1200
SSSQIPEGFG LTSGGSNYSL ARHTCKALTY LLLQPPSPKL PPHSTIRRTA
1210 1220 1230 1240 1250
TDLIGRGFTV WEPYMDVSAV LMGLLELCAD AEKQLANITM GLPLSPAADS
1260 1270 1280 1290 1300
ARSARHALSL IATARPPAFI TTIAKEVHRH TALAANTQSQ QSIHTTTLAR
1310 1320 1330 1340 1350
AKGEILRVIE ILIEKMPTDV VDLLVEVMDI IMYCLEGSLV KKKGLQECFP
1360 1370 1380 1390 1400
AICRFYMVSY YERSHRIAVG ARHGSVALYD IRTGKCQTIH GHKGPITAVS
1410 1420 1430 1440 1450
FAPDGRYLAT YSNTDSHISF WQMNTSLLGS IGMLNSAPQL RCIKTYQVPP
1460 1470 1480
VQPASPGSHN ALKLARLIWT SNRNVILMAH DGKEHRFMV
Computationally mapped potential isoform sequencesi
There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketA0A494B9S5 | A0A494B9S5_MOUSE | WD repeat-containing protein 7 | Wdr7 | 178 | Annotation score: | ||
Q8C711 | Q8C711_MOUSE | WD repeat-containing protein 7 | Wdr7 | 531 | Annotation score: | ||
A0A494B9P4 | A0A494B9P4_MOUSE | WD repeat-containing protein 7 | Wdr7 | 488 | Annotation score: |
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 116 | F → L in BAE32595 (PubMed:16141072).Curated | 1 | |
Sequence conflicti | 168 | R → H in AAL03981 (Ref. 1) Curated | 1 | |
Sequence conflicti | 168 | R → H in AAL03982 (Ref. 1) Curated | 1 | |
Sequence conflicti | 566 | I → V in BAE32595 (PubMed:16141072).Curated | 1 | |
Sequence conflicti | 579 | C → S in AAL03981 (Ref. 1) Curated | 1 | |
Sequence conflicti | 579 | C → S in AAL03982 (Ref. 1) Curated | 1 | |
Sequence conflicti | 938 | P → A in AAL03981 (Ref. 1) Curated | 1 | |
Sequence conflicti | 938 | P → A in AAL03982 (Ref. 1) Curated | 1 | |
Sequence conflicti | 938 | P → A in BAC65586 (PubMed:12693553).Curated | 1 |
Alternative sequence
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Alternative sequenceiVSP_015275 | 950 – 981 | Missing in isoform 2. 3 PublicationsAdd BLAST | 32 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AF188123 mRNA Translation: AAL03981.1 AF188124 mRNA Translation: AAL03982.1 AK154451 mRNA Translation: BAE32595.1 CH466528 Genomic DNA Translation: EDL09715.1 BC125573 mRNA Translation: AAI25574.1 BC137785 mRNA Translation: AAI37786.1 AK122304 mRNA Translation: BAC65586.1 |
CCDSi | CCDS50307.1 [Q920I9-1] CCDS89260.1 [Q920I9-2] |
RefSeqi | NP_001014981.1, NM_001014981.1 [Q920I9-1] XP_006525540.1, XM_006525477.3 |
Genome annotation databases
Ensembli | ENSMUST00000072726; ENSMUSP00000072509; ENSMUSG00000040560 [Q920I9-1] ENSMUST00000236879; ENSMUSP00000158252; ENSMUSG00000040560 [Q920I9-2] |
GeneIDi | 104082 |
KEGGi | mmu:104082 |
UCSCi | uc008fea.2, mouse [Q920I9-1] uc008feb.2, mouse [Q920I9-2] |
Keywords - Coding sequence diversityi
Alternative splicingSimilar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AF188123 mRNA Translation: AAL03981.1 AF188124 mRNA Translation: AAL03982.1 AK154451 mRNA Translation: BAE32595.1 CH466528 Genomic DNA Translation: EDL09715.1 BC125573 mRNA Translation: AAI25574.1 BC137785 mRNA Translation: AAI37786.1 AK122304 mRNA Translation: BAC65586.1 |
CCDSi | CCDS50307.1 [Q920I9-1] CCDS89260.1 [Q920I9-2] |
RefSeqi | NP_001014981.1, NM_001014981.1 [Q920I9-1] XP_006525540.1, XM_006525477.3 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
BioGRIDi | 222341, 9 interactors |
IntActi | Q920I9, 5 interactors |
MINTi | Q920I9 |
STRINGi | 10090.ENSMUSP00000072509 |
PTM databases
iPTMneti | Q920I9 |
PhosphoSitePlusi | Q920I9 |
SwissPalmi | Q920I9 |
Proteomic databases
jPOSTi | Q920I9 |
PaxDbi | Q920I9 |
PeptideAtlasi | Q920I9 |
PRIDEi | Q920I9 |
Protocols and materials databases
Antibodypediai | 62690, 17 antibodies |
DNASUi | 104082 |
Genome annotation databases
Ensembli | ENSMUST00000072726; ENSMUSP00000072509; ENSMUSG00000040560 [Q920I9-1] ENSMUST00000236879; ENSMUSP00000158252; ENSMUSG00000040560 [Q920I9-2] |
GeneIDi | 104082 |
KEGGi | mmu:104082 |
UCSCi | uc008fea.2, mouse [Q920I9-1] uc008feb.2, mouse [Q920I9-2] |
Organism-specific databases
CTDi | 23335 |
MGIi | MGI:1860197, Wdr7 |
Rougei | Search... |
Phylogenomic databases
eggNOGi | KOG4155, Eukaryota |
GeneTreei | ENSGT00940000155301 |
HOGENOMi | CLU_004362_1_0_1 |
InParanoidi | Q920I9 |
OMAi | CEGKAVP |
OrthoDBi | 84170at2759 |
TreeFami | TF313196 |
Miscellaneous databases
BioGRID-ORCSi | 104082, 5 hits in 18 CRISPR screens |
ChiTaRSi | Wdr7, mouse |
PROi | PR:Q920I9 |
RNActi | Q920I9, protein |
SOURCEi | Search... |
Gene expression databases
Bgeei | ENSMUSG00000040560, Expressed in lumbar subsegment of spinal cord and 257 other tissues |
ExpressionAtlasi | Q920I9, baseline and differential |
Genevisiblei | Q920I9, MM |
Family and domain databases
Gene3Di | 2.130.10.10, 3 hits |
InterProi | View protein in InterPro IPR011047, Quinoprotein_ADH-like_supfam IPR015943, WD40/YVTN_repeat-like_dom_sf IPR001680, WD40_repeat IPR019775, WD40_repeat_CS IPR017986, WD40_repeat_dom IPR036322, WD40_repeat_dom_sf |
Pfami | View protein in Pfam PF00400, WD40, 3 hits |
SMARTi | View protein in SMART SM00320, WD40, 7 hits |
SUPFAMi | SSF50978, SSF50978, 1 hit SSF50998, SSF50998, 1 hit |
PROSITEi | View protein in PROSITE PS00678, WD_REPEATS_1, 3 hits PS50082, WD_REPEATS_2, 4 hits PS50294, WD_REPEATS_REGION, 3 hits |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | WDR7_MOUSE | |
Accessioni | Q920I9Primary (citable) accession number: Q920I9 Secondary accession number(s): Q059Q1 Q920J0 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | August 30, 2005 |
Last sequence update: | July 27, 2011 | |
Last modified: | December 2, 2020 | |
This is version 142 of the entry and version 3 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Chordata Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- MGD cross-references
Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot